Package evaluation of DiagrammaticEquations on Julia 1.12.0-DEV.2153 (83dcbd426d*) started at 2025-03-31T12:37:31.254 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.45s ################################################################################ # Installation # Installing DiagrammaticEquations... Resolving package versions... ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:736 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.21 Updating `~/.julia/environments/v1.12/Project.toml` [6f00c28b] + DiagrammaticEquations v0.1.8 Updating `~/.julia/environments/v1.12/Manifest.toml` [227ef7b5] + ACSets v0.2.21 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [e2ed5e7c] + Bijections v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [aafaddc9] + CatIndices v0.2.2 [134e5e36] + Catlab 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libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 8.05s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 11 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7e8d2bdd3f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_54285.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #632 at ./asyncevent.jl:359 jfptr_YY.632_67428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007e8ce1036c20 Total snapshots: 218. Utilization: 0% ╎218 @Base/precompilation.jl:931 (::Base.Precompilation.var"#_precompilepkg… ╎ 218 @Base/precompilation.jl:762 kwcall(::@NamedTuple{single_requested_pkg… ╎ 151 @Base/…ecompilation.jl:766 (::Base.Precompilation.var"#monitor_std#_… ╎ 151 @Base/io.jl:472 eof ╎ 151 @Base/stream.jl:106 eof ╎ 151 @Base/stream.jl:416 wait_readnb(x::Base.PipeEndpoint, nb::Int64) ╎ ╎ 151 @Base/condition.jl:136 wait ╎ ╎ 151 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threa… ╎ ╎ 151 @Base/task.jl:1199 wait() 151╎ ╎ 151 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchro… ╎ 67 @Base/…ecompilation.jl:767 (::Base.Precompilation.var"#monitor_std#_… ╎ 67 @Base/io.jl:619 readline ╎ 67 @Base/io.jl:619 readline(s::Pipe; keep::Bool) ╎ 67 @Base/iobuffer.jl:918 copyline ╎ ╎ 67 @Base/iobuffer.jl:942 copyline(out::IOBuffer, s::Pipe; keep::Boo… ╎ ╎ 67 @Base/io.jl:464 copyuntil ╎ ╎ 67 @Base/io.jl:464 #copyuntil#331 ╎ ╎ 67 @Base/stream.jl:1029 copyuntil ╎ ╎ 67 @Base/stream.jl:1045 copyuntil(out::IOBuffer, x::Base.PipeEn… ╎ ╎ ╎ 67 @Base/condition.jl:136 wait ╎ ╎ ╎ 67 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.… ╎ ╎ ╎ 67 @Base/task.jl:1199 wait() 66╎ ╎ ╎ 67 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSy… Task 0x00007e8ce1036fe0 Total snapshots: 7. Utilization: 0% ╎7 @Base/asyncevent.jl:359 (::Base.var"#632#633"{FileWatching.Pidfile.var"#4#… ╎ 7 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 7 @Base/condition.jl:136 wait ╎ 7 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.SpinL… ╎ 7 @Base/task.jl:1199 wait() 6╎ 7 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{Ta… Thread 2 (default) Task 0x00007e8d1e200100 Total snapshots: 225. Utilization: 0% ╎225 @Base/Base.jl:349 (::Base.var"#start_profile_listener##0#start_profile… ╎ 225 @Base/Base.jl:329 profile_printing_listener(cond::Base.AsyncCondition) ╎ 225 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 225 @Base/condition.jl:136 wait ╎ 225 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.… ╎ 225 @Base/task.jl:1199 wait() 224╎ ╎ 225 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchroniz… ERROR: LoadError: The following 2 direct dependencies failed to precompile: DiagrammaticEquations Failed to precompile DiagrammaticEquations [6f00c28b-6bed-4403-80fa-30e0dc12f317] to "/home/pkgeval/.julia/compiled/v1.12/DiagrammaticEquations/jl_cAQiOS". WARNING: Detected access to binding `decapodeacset.Decapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `decapodeacset.NamedDecapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `decapodeacset.SummationDecapode` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Constructor for type "Decapode" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "Decapode" refers to `decapodeacset.Decapode`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Decapode end`. Hint: To silence the warning, qualify `Decapode` as `decapodeacset.Decapode` in the method signature or explicitly `import decapodeacset: Decapode`. WARNING: Constructor for type "SummationDecapode" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "SummationDecapode" refers to `decapodeacset.SummationDecapode`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function SummationDecapode end`. Hint: To silence the warning, qualify `SummationDecapode` as `decapodeacset.SummationDecapode` in the method signature or explicitly `import decapodeacset: SummationDecapode`. WARNING: Constructor for type "Term" was extended in `DiagrammaticEquations` without explicit qualification or import. NOTE: Assumed "Term" refers to `decapodes.Term`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Term end`. Hint: To silence the warning, qualify `Term` as `decapodes.Term` in the method signature or explicitly `import decapodes: Term`. WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Alg end`. Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Bool end`. Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 736 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm12SelectionDAG16computeKnownBitsENS_7SDValueERKNS_5APIntEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZNK4llvm12SelectionDAG16computeKnownBitsENS_7SDValueEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZNK4llvm12SelectionDAG19haveNoCommonBitsSetENS_7SDValueES1_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_111DAGCombiner8visitADDEPN4llvm6SDNodeE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_111DAGCombiner7combineEPN4llvm6SDNodeE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_111DAGCombiner3RunEN4llvm12CombineLevelE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12SelectionDAG7CombineENS_12CombineLevelEPNS_9AAResultsENS_15CodeGenOptLevelE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel17CodeGenAndEmitDAGEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel20SelectAllBasicBlocksERKNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16SelectionDAGISel20runOnMachineFunctionERNS_15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_115X86DAGToDAGISel20runOnMachineFunctionERN4llvm15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1686 addModule at /source/src/jitlayers.cpp:2162 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:949 jl_compile_method_internal at /source/src/gf.c:2972 _jl_invoke at /source/src/gf.c:3454 [inlined] ijl_apply_generic at /source/src/gf.c:3662 push! at ./set.jl:137 union! at ./abstractset.jl:106 Set at ./set.jl:47 [inlined] macro expansion at /home/pkgeval/.julia/packages/MacroTools/CJmbb/src/match/macro.jl:27 [inlined] traitfn at /home/pkgeval/.julia/packages/SimpleTraits/l1ZsK/src/SimpleTraits.jl:267 unknown function (ip: 0x7febe788147c) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 @traitfn at /home/pkgeval/.julia/packages/SimpleTraits/l1ZsK/src/SimpleTraits.jl:382 unknown function (ip: 0x7febe786045c) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_invoke at /source/src/gf.c:3469 jl_invoke_julia_macro at /source/src/ast.c:1138 jl_expand_macros at /source/src/ast.c:1200 ijl_expand_with_loc_warn at /source/src/ast.c:1314 jl_toplevel_eval_flex at /source/src/toplevel.c:969 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 _include at ./loading.jl:2921 include at ./Base.jl:304 IncludeInto at ./Base.jl:305 jfptr_IncludeInto_109675.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_eval_module_expr at /source/src/toplevel.c:210 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:826 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 _include at ./loading.jl:2921 include at ./Base.jl:303 include_package_for_output at ./loading.jl:3015 jfptr_include_package_for_output_60087.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 include_string at ./loading.jl:2871 [inlined] exec_options at ./client.jl:326 _start at ./client.jl:560 jfptr__start_58283.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] true_main at /source/src/jlapi.c:951 jl_repl_entrypoint at /source/src/jlapi.c:1111 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7febe8bab249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 728 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #632 at ./asyncevent.jl:359 jfptr_YY.632_67428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing) │ @ Base ./loading.jl:2796 │ [3] require_stdlib │ @ ./loading.jl:2794 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 628 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #632 at ./asyncevent.jl:359 jfptr_YY.632_67428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing) │ @ Base ./loading.jl:2796 │ [3] require_stdlib │ @ ./loading.jl:2794 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 624 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #632 at ./asyncevent.jl:359 jfptr_YY.632_67428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing) │ @ Base ./loading.jl:2796 │ [3] require_stdlib │ @ ./loading.jl:2794 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340 Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_Silm5U"). Fatal error: ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 576 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #632 at ./asyncevent.jl:359 unknown function (ip: 0x77dc779c247f) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ERROR: LoadError: ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing) │ @ Base ./loading.jl:2796 │ [3] require_stdlib │ @ ./loading.jl:2794 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340 ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2219 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2227 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2497 [4] _require_prelocked @ ./loading.jl:2496 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2494 [7] require @ ./loading.jl:2492 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [16] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:67 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:113 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:112 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [9] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:67 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:113 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:112 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [17] IncludeInto @ ./Base.jl:305 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.12/JLD2/jl_Hwa4M7". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.12/MetaGraphs/jl_ezeafa". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/ImageSegmentation/sYULr/src/ImageSegmentation.jl:11 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ImageSegmentation/sYULr/src/ImageSegmentation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ImageSegmentation [80713f31-8817-5129-9cf8-209ff8fb23e1] to "/home/pkgeval/.julia/compiled/v1.12/ImageSegmentation/jl_8YsRK1". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] include(mod::Module, _path::String) @ Base ./Base.jl:303 [19] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [20] top-level scope @ stdin:5 [21] eval(m::Module, e::Any) @ Core ./boot.jl:489 [22] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [23] include_string @ ./loading.jl:2871 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [25] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Images/hQ3Jo/src/Images.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Images [916415d5-f1e6-5110-898d-aaa5f9f070e0] to "/home/pkgeval/.julia/compiled/v1.12/Images/jl_Xev8D5". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/ColorSchemeTools/bGr3j/src/ColorSchemeTools.jl:17 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ColorSchemeTools/bGr3j/src/ColorSchemeTools.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ColorSchemeTools [d3e213a1-5e82-5c18-bb32-2a58a99f8c46] to "/home/pkgeval/.julia/compiled/v1.12/ColorSchemeTools/jl_eM1L6Y". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [19] top-level scope @ ~/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/Deca.jl:14 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [21] top-level scope @ ~/.julia/packages/DiagrammaticEquations/e0DTa/src/DiagrammaticEquations.jl:69 [22] include(mod::Module, _path::String) @ Base ./Base.jl:303 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3015 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [27] include_string @ ./loading.jl:2871 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [29] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/deca_visualization.jl:13 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/deca/Deca.jl:1 in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/src/DiagrammaticEquations.jl:1 in expression starting at stdin:5 CatlabMetaGraphsExt Failed to precompile CatlabMetaGraphsExt [5e51d586-aaca-557a-95fe-36469851e5ed] to "/home/pkgeval/.julia/compiled/v1.12/CatlabMetaGraphsExt/jl_znpg8D". Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_cucuOW"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2219 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2227 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2497 [4] _require_prelocked @ ./loading.jl:2496 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2494 [7] require @ ./loading.jl:2492 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [16] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:67 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:113 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:112 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] (::JLD2.var"#111#112")(path::String, ::IOStream) @ JLD2 ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [9] mktemp(fn::JLD2.var"#111#112", parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:67 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/zOnGe/src/workloads.jl:113 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:112 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [17] IncludeInto @ ./Base.jl:305 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.12/JLD2/jl_CoRi4g". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.12/MetaGraphs/jl_9mYfv4". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3302 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2688 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#232 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3873 [11] maybe_cachefile_lock @ ./loading.jl:3870 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2674 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2502 [14] macro expansion @ ./loading.jl:2430 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2395 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2371 [18] top-level scope @ ~/.julia/packages/Catlab/jPXBM/ext/CatlabMetaGraphsExt.jl:5 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3015 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2861 [24] include_string @ ./loading.jl:2871 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [26] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/ext/CatlabMetaGraphsExt.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2716.97s ################################################################################ # Testing # ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 1 of 2 signal (10): User defined signal 1 unknown function (ip: 0x741c8b55df14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_54285.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) _ZN4llvm15SmallVectorImplINS_9MCOperandEEaSERKS2_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) unknown function (ip: 0x9ffffffff) at (unknown file) _ZN12_GLOBAL__N_113X86AsmBackend18emitInstructionEndERN4llvm16MCObjectStreamerERKNS1_6MCInstE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13X86AsmPrinter23EmitAndCountInstructionERNS_6MCInstE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13X86AsmPrinter15emitInstructionEPKNS_12MachineInstrE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm10AsmPrinter16emitFunctionBodyEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13X86AsmPrinter20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1686 addModule at /source/src/jitlayers.cpp:2162 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:949 jl_compile_method_internal at /source/src/gf.c:2972 _jl_invoke at /source/src/gf.c:3454 [inlined] ijl_apply_generic at /source/src/gf.c:3662 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x741c81f6e79f) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 _include at ./loading.jl:2921 include at ./Base.jl:303 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_58283.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] true_main at /source/src/jlapi.c:951 jl_repl_entrypoint at /source/src/jlapi.c:1111 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x741c8b4ff249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Testing DiagrammaticEquations ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x0000741c7d800010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:560 _start() ╎ 1 @Base/client.jl:328 exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:303 include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2921 _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2861 include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 1 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 1 @Pkg/src/API.jl:152 test ╎ ╎ 1 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.Pairs… ╎ ╎ 1 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… Thread 2 (default) Task 0x0000741c7d800100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:349 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:329 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… Status `/tmp/jl_86pF8R/Project.toml` [227ef7b5] ACSets v0.2.21 [4c88cf16] Aqua v0.8.11 [134e5e36] Catlab v0.16.19 [b1c52339] CombinatorialSpaces v0.7.4 [6f00c28b] DiagrammaticEquations v0.1.8 [d8e11817] MLStyle v0.4.17 [d1185830] SymbolicUtils v3.24.1 [37e2e46d] LinearAlgebra v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_86pF8R/Manifest.toml` [227ef7b5] ACSets v0.2.21 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [23cfdc9f] 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SLEEFPirates v0.6.43 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.4 [47aef6b3] SimpleWeightedGraphs v1.5.0 [45858cf5] Sixel v0.1.3 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [cae243ae] StackViews v0.1.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [892a3eda] StringManipulation v0.4.1 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [2efcf032] SymbolicIndexingInterface v0.3.38 [d1185830] SymbolicUtils v3.24.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [ed4db957] TaskLocalValues v0.1.2 [62fd8b95] TensorCore v0.1.1 [8ea1fca8] TermInterface v2.0.0 [8290d209] ThreadingUtilities v0.5.2 [731e570b] TiffImages v0.11.3 [06e1c1a7] TiledIteration v0.5.0 [a759f4b9] TimerOutputs v0.5.28 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [a7c27f48] Unityper v0.1.6 [013be700] UnsafeAtomics v0.3.0 [3d5dd08c] VectorizationBase v0.21.71 [897b6980] WeakValueDicts v0.1.0 [e3aaa7dc] WebP v0.1.3 [efce3f68] WoodburyMatrices v1.0.0 [5ae413db] EarCut_jll v2.2.4+0 [2e619515] Expat_jll v2.6.5+0 [f5851436] FFTW_jll v3.3.10+3 [61579ee1] Ghostscript_jll v9.55.0+4 [59f7168a] Giflib_jll v5.2.3+0 [f8c6e375] Git_jll v2.49.0+0 [c73af94c] ImageMagick_jll v7.1.1+1 [905a6f67] Imath_jll v3.1.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [aacddb02] JpegTurbo_jll v3.1.1+0 ⌅ [88015f11] LERC_jll v3.0.0+1 [d4300ac3] Libgcrypt_jll v1.11.0+0 [7e76a0d4] Libglvnd_jll v1.7.0+0 [7add5ba3] Libgpg_error_jll v1.51.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 ⌅ [89763e89] Libtiff_jll v4.4.0+0 ⌃ [d3a379c0] LittleCMS_jll v2.12.0+0 [856f044c] MKL_jll v2025.0.1+1 [18a262bb] OpenEXR_jll v3.2.4+0 ⌃ [643b3616] OpenJpeg_jll v2.4.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [02c8fc9c] XML2_jll v2.13.6+1 [aed1982a] XSLT_jll v1.1.42+0 [4f6342f7] Xorg_libX11_jll v1.8.6+3 [0c0b7dd1] Xorg_libXau_jll v1.0.12+0 [a3789734] Xorg_libXdmcp_jll v1.1.5+0 [1082639a] Xorg_libXext_jll v1.3.6+3 [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] Xorg_libxcb_jll v1.17.0+3 [c5fb5394] Xorg_xtrans_jll v1.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [b53b4c65] libpng_jll v1.6.47+0 [075b6546] libsixel_jll v1.10.5+0 ⌃ [c5f90fcd] libwebp_jll v1.4.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Core | 1 1 0.1s Precompiling packages... [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 unknown function (ip: 0x741c8b55df14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [748] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/DiagrammaticEquations/e0DTa/test/composition.jl:2 unknown function (ip: 0x7146186fff14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 poptask at ./task.jl:1187 #wait#398 at ./condition.jl:141 wait at ./task.jl:1199 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #wait#398 at ./condition.jl:141 profile_printing_listener at ./Base.jl:329 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #start_profile_listener##0 at ./Base.jl:349 profile_printing_listener at ./Base.jl:329 jfptr_YY.start_profile_listenerYY.YY.0_54285.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 #start_profile_listener##0 at ./Base.jl:349 poptask at ./task.jl:1187 jfptr_YY.start_profile_listenerYY.YY.0_54285.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) wait at ./task.jl:1199 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 #wait#398 at ./condition.jl:141 poptask at ./task.jl:1187 wait at ./task.jl:1199 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 task_done_hook at ./task.jl:839 jfptr_wait_73326.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2383 unknown function (ip: 0x741c81f93ed3) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jfptr_task_done_hook_68203.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 #202 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2323 withenv at ./env.jl:265 #187 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2144 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2002 #183 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2111 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x741c81f7dddc) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] jl_finish_task at /source/src/task.c:345 start_task at /source/src/task.c:1260 unknown function (ip: (nil)) at (unknown file) Allocations: 3938382 (Pool: 3938216; Big: 166); GC: 8 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#179 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2058 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2050 unknown function (ip: 0x741c81f7a481) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 #test#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:465 unknown function (ip: 0x741c81f79511) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x741c81f74988) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x741c81f6e79f) at (unknown file) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:489 include_string at ./loading.jl:2861 _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 _include at ./loading.jl:2921 include at ./Base.jl:303 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_58283.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3462 [inlined] ijl_apply_generic at /source/src/gf.c:3662 jl_apply at /source/src/julia.h:2347 [inlined] true_main at /source/src/jlapi.c:951 jl_repl_entrypoint at /source/src/jlapi.c:1111 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x741c8b4ff249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 24016039 (Pool: 24015521; Big: 518); GC: 26 PkgEval terminated after 2775.9s: test duration exceeded the time limit