Package evaluation of ManifoldDiff on Julia 1.13.0-DEV.417 (813bcf3aa6*) started at 2025-04-21T23:12:53.743 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.83s ################################################################################ # Installation # Installing ManifoldDiff... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [af67fdf4] + ManifoldDiff v0.4.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [a0c0ee7d] + DifferentiationInterface v0.6.52 [af67fdf4] + ManifoldDiff v0.4.2 [3362f125] + ManifoldsBase v1.0.3 [ae029012] + Requires v1.3.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 4.05s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 4 direct dependencies failed to precompile: RecursiveArrayToolsZygoteExt Failed to precompile RecursiveArrayToolsZygoteExt [6283b665-1224-52f5-a8f0-5953a1198cc4] to "/home/pkgeval/.julia/compiled/v1.13/RecursiveArrayToolsZygoteExt/jl_1yujVN" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_qWKsjU" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#233 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/RecursiveArrayTools/0YWDD/ext/RecursiveArrayToolsZygoteExt.jl:6 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/RecursiveArrayTools/0YWDD/ext/RecursiveArrayToolsZygoteExt.jl:1 in expression starting at stdin:5 RecursiveArrayToolsReverseDiffExt Failed to precompile RecursiveArrayToolsReverseDiffExt [c5f39a36-1949-51cd-b5fc-0f226c89d745] to "/home/pkgeval/.julia/compiled/v1.13/RecursiveArrayToolsReverseDiffExt/jl_4J8xVw" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_JsZddP" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#233 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/RecursiveArrayTools/0YWDD/ext/RecursiveArrayToolsReverseDiffExt.jl:5 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/RecursiveArrayTools/0YWDD/ext/RecursiveArrayToolsReverseDiffExt.jl:1 in expression starting at stdin:5 Zygote Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_63CNaq" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 DifferentiationInterfaceZygoteExt Failed to precompile DifferentiationInterfaceZygoteExt [bbc9ae08-70e9-50a1-83a4-36e0af391677] to "/home/pkgeval/.julia/compiled/v1.13/DifferentiationInterfaceZygoteExt/jl_2oPjfm" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_kqMafB" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#233 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/DifferentiationInterface/Yk2Kt/ext/DifferentiationInterfaceZygoteExt/DifferentiationInterfaceZygoteExt.jl:6 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/DifferentiationInterface/Yk2Kt/ext/DifferentiationInterfaceZygoteExt/DifferentiationInterfaceZygoteExt.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2508.11s ################################################################################ # Testing # Testing ManifoldDiff Status `/tmp/jl_5IH2ay/Project.toml` [47edcb42] ADTypes v1.14.0 [082447d4] ChainRules v1.72.3 [d360d2e6] ChainRulesCore v1.25.1 [a0c0ee7d] DifferentiationInterface v0.6.52 [497a8b3b] DoubleFloats v1.4.3 [6a86dc24] FiniteDiff v2.27.0 [26cc04aa] FiniteDifferences v0.12.32 ⌅ [f6369f11] ForwardDiff v0.10.38 [af67fdf4] ManifoldDiff v0.4.2 [1cead3c2] Manifolds v0.10.16 [3362f125] ManifoldsBase v1.0.3 [1dea7af3] OrdinaryDiffEq v6.93.0 [731186ca] RecursiveArrayTools v3.31.2 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 [90137ffa] StaticArrays v1.9.13 [e88e6eb3] Zygote v0.7.6 [37e2e46d] LinearAlgebra v1.12.0 [d6f4376e] Markdown v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_5IH2ay/Manifest.toml` [47edcb42] ADTypes v1.14.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.18.0 [4c555306] ArrayLayouts v1.11.1 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.1.3 [2a0fbf3d] CPUSummary v0.2.6 [082447d4] ChainRules v1.72.3 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.5.8 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.167.2 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.52 [ffbed154] DocStringExtensions v0.9.4 [497a8b3b] DoubleFloats v1.4.3 [b7d42ee7] Einsum v0.4.1 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.8 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.0.2 [a4df4552] FastPower v1.1.2 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [26cc04aa] FiniteDifferences v0.12.32 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [14197337] GenericLinearAlgebra v0.3.15 [c145ed77] GenericSchur v0.5.5 [86223c79] Graphs v1.12.1 [7869d1d1] IRTools v0.4.14 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [ae98c720] Jieko v0.2.1 [2c470bb0] Kronecker v0.5.5 [ba0b0d4f] Krylov v0.10.0 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.3.0 [7a12625a] LinearMaps v3.11.4 [7ed4a6bd] LinearSolve v3.8.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [af67fdf4] ManifoldDiff v0.4.2 [1cead3c2] Manifolds v0.10.16 [3362f125] ManifoldsBase v1.0.3 [d125e4d3] ManualMemory v0.1.8 ⌅ [99c1a7ee] MatrixEquations v2.4.2 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.5 [46d2c3a1] MuladdMacro v0.2.4 [d41bc354] NLSolversBase v7.9.1 [77ba4419] NaNMath v1.1.3 [356022a1] NamedDims v1.2.2 [8913a72c] NonlinearSolve v4.6.0 [be0214bd] NonlinearSolveBase v1.5.3 [5959db7a] NonlinearSolveFirstOrder v1.3.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.2.1 [26075421] NonlinearSolveSpectralMethods v1.1.1 [bac558e1] OrderedCollections v1.8.0 [1dea7af3] OrdinaryDiffEq v6.93.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] OrdinaryDiffEqBDF v1.4.0 [bbf590c4] OrdinaryDiffEqCore v1.22.0 [50262376] OrdinaryDiffEqDefault v1.3.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.6.0 [9286f039] OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] OrdinaryDiffEqExponentialRK v1.4.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] OrdinaryDiffEqFIRK v1.10.0 [101fe9f7] OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.1.1 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.1.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.3.0 [521117fe] OrdinaryDiffEqLinear v1.1.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.2.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.6.0 [c9986a66] OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.3.0 [5b33eab2] OrdinaryDiffEqPRK v1.1.0 [04162be5] OrdinaryDiffEqQPRK v1.1.0 [af6ede74] OrdinaryDiffEqRKN v1.1.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.9.0 [2d112036] OrdinaryDiffEqSDIRK v1.3.0 [669c94d9] OrdinaryDiffEqSSPRK v1.2.1 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.1.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.1.1 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 [f517fe37] Polyester v0.7.16 [1d0040c9] PolyesterWeave v0.2.2 [f27b6e38] Polynomials v4.0.19 [d236fae5] PreallocationTools v0.4.26 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [be4d8f0f] Quadmath v0.5.11 [94ee1d12] Quaternions v0.7.6 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.31.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 [708f8203] Richardson v1.4.2 [7e49a35a] RuntimeGeneratedFunctions v0.5.13 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.85.0 [19f34311] SciMLJacobianOperators v0.1.2 [c0aeaf25] SciMLOperators v0.3.13 [53ae85a6] SciMLStructures v1.7.0 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.2.2 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [47aef6b3] SimpleWeightedGraphs v1.5.0 [a2af1166] SortingAlgorithms v1.2.1 [47a9eef4] SparseDiffTools v2.24.0 [dc90abb0] SparseInverseSubset v0.1.2 [0a514795] SparseMatrixColorings v0.4.18 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [2efcf032] SymbolicIndexingInterface v0.3.39 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [8290d209] ThreadingUtilities v0.5.3 [a759f4b9] TimerOutputs v0.5.28 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [19fa3120] VertexSafeGraphs v0.2.0 [e88e6eb3] Zygote v0.7.6 [700de1a5] ZygoteRules v0.2.7 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 4062.7 ms ✓ ManifoldsBase → ManifoldsBaseRecursiveArrayToolsExt 1 dependency successfully precompiled in 4 seconds. 48 already precompiled. Precompiling packages... 10858.9 ms ✓ Manifolds → ManifoldsRecursiveArrayToolsExt 1 dependency successfully precompiled in 11 seconds. 119 already precompiled. Precompiling packages... 8714.1 ms ✓ ArrayInterface → ArrayInterfaceReverseDiffExt 1 dependency successfully precompiled in 9 seconds. 39 already precompiled. Precompiling packages... 6503.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceReverseDiffExt 1 dependency successfully precompiled in 7 seconds. 39 already precompiled. Precompiling packages... 9940.1 ms ✓ ChainRules ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 757 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x74f5763d5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Info Given Zygote was explicitly requested, output will be shown live  WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x000074f56b10bd00 Total snapshots: 407. Utilization: 0% ╎407 @Base/task.jl:1150 wait_forever() 406╎ 407 @Base/task.jl:1216 wait() Thread 2 (default) Task 0x000074f56c3fc100 Total snapshots: 407. Utilization: 0% ╎407 @Base/task.jl:1150 wait_forever() 406╎ 407 @Base/task.jl:1216 wait() ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [3] top-level scope  @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67  [4] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [5] macro expansion  @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]  [6] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [8] top-level scope  @ stdin:5  [9] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [11] include_string  @ ./loading.jl:2834 [inlined]  [12] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [13] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ✗ Zygote 1 dependency successfully precompiled in 38 seconds. 64 already precompiled. 1 dependency had output during precompilation: ┌ ChainRules │ ====================================================================================== │ Information request received. A stacktrace will print followed by a 1.0 second profile │ ====================================================================================== │ │ cmd: /opt/julia/bin/julia 778 running 1 of 1 │ │ signal (10): User defined signal 1 │ gc_page_data at /source/src/gc-stock.h:332 [inlined] │ jl_gc_small_alloc_inner at /source/src/gc-stock.c:737 │ ijl_gc_small_alloc at /source/src/gc-stock.c:774 │ j_Future_81956.1 at /opt/julia/lib/julia/sys.so (unknown line) │ abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3062 [inlined] │ abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3400 │ abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3764 │ abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3721 [inlined] │ typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4270 │ jfptr_typeinf_local_81874.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4428 │ const_prop_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1354 │ abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:904 │ abstract_call_method_with_const_args at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:874 │ handle1 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:178 │ jfptr_handle1_82121.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ doworkloop at ./../usr/share/julia/Compiler/src/inferencestate.jl:1205 │ jfptr_doworkloop_83044.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4419 │ typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1324 │ typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1416 [inlined] │ typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1424 │ jfptr_typeinf_ext_toplevel_81735.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ jl_apply at /source/src/julia.h:2353 [inlined] │ jl_type_infer at /source/src/gf.c:453 │ jl_compile_method_internal at /source/src/gf.c:3001 │ _jl_invoke at /source/src/gf.c:3490 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ @scalar_rule at /home/pkgeval/.julia/packages/ChainRulesCore/U6wNx/src/rule_definition_tools.jl:105 │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_invoke at /source/src/gf.c:3505 │ jl_invoke_julia_macro at /source/src/ast.c:1138 │ jl_expand_macros at /source/src/ast.c:1200 │ ijl_expand_with_loc_warn at /source/src/ast.c:1314 │ jl_toplevel_eval_flex at /source/src/toplevel.c:975 │ ijl_toplevel_eval at /source/src/toplevel.c:1050 │ ijl_toplevel_eval_in at /source/src/toplevel.c:1095 │ eval at ./boot.jl:489 │ include_string at ./loading.jl:2824 │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ _include at ./loading.jl:2884 │ include at ./Base.jl:304 │ IncludeInto at ./Base.jl:305 │ jfptr_IncludeInto_71723.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ jl_apply at /source/src/julia.h:2353 [inlined] │ do_call at /source/src/interpreter.c:124 │ eval_value at /source/src/interpreter.c:242 │ eval_stmt_value at /source/src/interpreter.c:193 [inlined] │ eval_body at /source/src/interpreter.c:707 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 │ jl_toplevel_eval_flex at /source/src/toplevel.c:1038 │ jl_eval_module_expr at /source/src/toplevel.c:201 [inlined] │ jl_toplevel_eval_flex at /source/src/toplevel.c:817 │ jl_toplevel_eval_flex at /source/src/toplevel.c:978 │ ijl_toplevel_eval at /source/src/toplevel.c:1050 │ ijl_toplevel_eval_in at /source/src/toplevel.c:1095 │ eval at ./boot.jl:489 │ include_string at ./loading.jl:2824 │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ _include at ./loading.jl:2884 │ include at ./Base.jl:303 │ include_package_for_output at ./loading.jl:2978 │ jfptr_include_package_for_output_21861.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ jl_apply at /source/src/julia.h:2353 [inlined] │ do_call at /source/src/interpreter.c:124 │ eval_value at /source/src/interpreter.c:242 │ eval_stmt_value at /source/src/interpreter.c:193 [inlined] │ eval_body at /source/src/interpreter.c:707 │ jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 │ jl_toplevel_eval_flex at /source/src/toplevel.c:1038 │ jl_toplevel_eval_flex at /source/src/toplevel.c:978 │ ijl_toplevel_eval at /source/src/toplevel.c:1050 │ ijl_toplevel_eval_in at /source/src/toplevel.c:1095 │ eval at ./boot.jl:489 │ include_string at ./loading.jl:2824 │ include_string at ./loading.jl:2834 [inlined] │ exec_options at ./client.jl:329 │ _start at ./client.jl:563 │ jfptr__start_19771.1 at /opt/julia/lib/julia/sys.so (unknown line) │ _jl_invoke at /source/src/gf.c:3498 [inlined] │ ijl_apply_generic at /source/src/gf.c:3698 │ jl_apply at /source/src/julia.h:2353 [inlined] │ true_main at /source/src/jlapi.c:950 │ jl_repl_entrypoint at /source/src/jlapi.c:1110 │ main at /source/cli/loader_exe.c:58 │ unknown function (ip: 0x7afee721e249) at /lib/x86_64-linux-gnu/libc.so.6 │ __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) │ unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S │ unknown function (ip: (nil)) at (unknown file) │ │ ============================================================== │ Profile collected. A report will print at the next yield point │ ============================================================== └ Differentiation backend: Error During Test at /home/pkgeval/.julia/packages/ManifoldDiff/ZFIzo/test/differentiation.jl:35 Got exception outside of a @test The following 1 direct dependency failed to precompile: Zygote Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_ChCcAs" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:67 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin: ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x73feb3b6ff14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x000073fe866260e0 Total snapshots: 378. Utilization: 0% ╎378 @Base/task.jl:1150 wait_forever() 377╎ 378 @Base/task.jl:1216 wait() Thread 2 (default) Task 0x000073fea99fc100 Total snapshots: 378. Utilization: 0% ╎378 @Base/task.jl:1150 wait_forever() 377╎ 378 @Base/task.jl:1216 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 unknown function (ip: 0x73feb3b6ff14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [757] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ManifoldDiff/ZFIzo/test/differentiation.jl:212 unknown function (ip: 0x74f5763d5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 wait_forever at ./task.jl:1150 jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) unknown function (ip: 0x74f5763e770d) at /lib/x86_64-linux-gnu/libc.so.6 malloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) posix_memalign at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) aligned_alloc at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:78 [inlined] operator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:149 wait at ./task.jl:1216 _ZN4llvm20BumpPtrAllocatorImplINS_15MallocAllocatorELm4096ELm4096ELm128EE12AllocateSlowEmmNS_5AlignE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) wait_forever at ./task.jl:1150 _ZN12_GLOBAL__N_121MachineBlockPlacement14buildCFGChainsEv at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) jfptr_wait_forever_29765.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 27477971 (Pool: 27477405; Big: 566); GC: 36 _ZN12_GLOBAL__N_121MachineBlockPlacement20runOnMachineFunctionERN4llvm15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1556 addModule at /source/src/jitlayers.cpp:2032 jl_compile_codeinst_now at /source/src/jitlayers.cpp:630 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:819 jl_compile_method_internal at /source/src/gf.c:3014 _jl_invoke at /source/src/gf.c:3490 [inlined] ijl_apply_generic at /source/src/gf.c:3698 _gradient at /home/pkgeval/.julia/packages/ManifoldDiff/ZFIzo/src/differentiationinterface.jl:10 unknown function (ip: 0x74f544270ccd) at (unknown file) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 gradient at /home/pkgeval/.julia/packages/ManifoldDiff/ZFIzo/src/riemannian_diff.jl:161 unknown function (ip: 0x74f54426fd67) at (unknown file) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:707 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1038 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 include_string at ./loading.jl:2824 _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 _include at ./loading.jl:2884 include at ./Base.jl:304 IncludeInto at ./Base.jl:305 jfptr_IncludeInto_71723.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:707 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1038 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 include_string at ./loading.jl:2824 _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 _include at ./loading.jl:2884 include at ./Base.jl:304 IncludeInto at ./Base.jl:305 jfptr_IncludeInto_71723.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:707 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1038 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 exec_options at ./client.jl:297 _start at ./client.jl:563 jfptr__start_19771.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] true_main at /source/src/jlapi.c:950 jl_repl_entrypoint at /source/src/jlapi.c:1110 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74f576377249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 69192636 (Pool: 69191748; Big: 888); GC: 33 PkgEval terminated after 2755.37s: test duration exceeded the time limit