Package evaluation of MCPhylo on Julia 1.13.0-DEV.417 (813bcf3aa6*) started at 2025-04-22T11:46:07.479 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing MCPhylo... Resolving package versions... Installed libdecor_jll ───────────────────── v0.2.2+0 Installed x265_jll ───────────────────────── v3.5.0+0 Installed JpegTurbo_jll ──────────────────── v3.1.1+0 Installed libfdk_aac_jll ─────────────────── v2.0.3+0 Installed Libmount_jll ───────────────────── v2.41.0+0 Installed GR_jll ─────────────────────────── v0.73.14+0 Installed HypergeometricFunctions ────────── v0.3.28 Installed OffsetArrays ───────────────────── v1.17.0 Installed LERC_jll ───────────────────────── v4.0.1+0 Installed Opus_jll ───────────────────────── v1.3.3+0 Installed Preferences ────────────────────── v1.4.3 Installed StatsFuns ──────────────────────── v1.4.0 Installed LoggingExtras ──────────────────── v1.1.0 Installed FFTW ───────────────────────────── v1.8.1 Installed Accessors ──────────────────────── v0.1.42 Installed Xorg_xkbcomp_jll ───────────────── v1.4.7+0 Installed RelocatableFolders ─────────────── v1.0.1 Installed PDMats ─────────────────────────── v0.11.34 Installed Measures ───────────────────────── v0.3.2 Installed ConcurrentUtilities ────────────── v2.5.0 Installed Unitful ────────────────────────── v1.22.0 Installed Contour ────────────────────────── v0.6.3 Installed ProgressMeter ──────────────────── v1.10.4 Installed StaticArrays ───────────────────── v1.9.13 Installed Grisu ──────────────────────────── v1.0.2 Installed Xorg_xcb_util_wm_jll ───────────── v0.4.1+1 Installed Xorg_xcb_util_image_jll ────────── v0.4.0+1 Installed NearestNeighbors ───────────────── v0.4.21 Installed RecipesPipeline ────────────────── v0.6.12 Installed PlotUtils ──────────────────────── v1.4.3 Installed ScopedValues ───────────────────── v1.3.0 Installed OpenSSL ────────────────────────── v1.4.3 Installed CEnum ──────────────────────────── v0.5.0 Installed Roots ──────────────────────────── v2.2.7 Installed DelimitedFiles ─────────────────── v1.9.1 Installed Xorg_libSM_jll ─────────────────── v1.2.6+0 Installed Cairo_jll ──────────────────────── v1.18.4+0 Installed FunctionWrappers ───────────────── v1.1.3 Installed Xorg_xcb_util_jll ──────────────── v0.4.0+1 Installed Fontconfig_jll ─────────────────── v2.16.0+0 Installed HTTP ───────────────────────────── v1.10.16 Installed IntelOpenMP_jll ────────────────── v2025.0.4+0 Installed ColorSchemes ───────────────────── v3.29.0 Installed Statistics ─────────────────────── v1.11.1 Installed GPUArrays ──────────────────────── v11.2.2 Installed Xorg_libxkbfile_jll ────────────── v1.1.3+0 Installed Xorg_libXinerama_jll ───────────── v1.1.6+0 Installed ZygoteRules ────────────────────── v0.2.7 Installed Static ─────────────────────────── v1.2.0 Installed EpollShim_jll ──────────────────── v0.0.20230411+1 Installed Xorg_libXau_jll ────────────────── v1.0.13+0 Installed SLEEFPirates ───────────────────── v0.6.43 Installed Missings ───────────────────────── v1.2.0 Installed Distances ──────────────────────── v0.10.12 Installed FFMPEG ─────────────────────────── v0.4.2 Installed FiniteDiff ─────────────────────── v2.27.0 Installed RealDot ────────────────────────── v0.1.0 Installed SIMDTypes ──────────────────────── v0.1.0 Installed IRTools ────────────────────────── v0.4.14 Installed IrrationalConstants ────────────── v0.2.4 Installed Bijectors ──────────────────────── v0.10.8 Installed Showoff ────────────────────────── v1.0.3 Installed Functors ───────────────────────── v0.3.0 Installed LLVM ───────────────────────────── v9.2.0 Installed ArnoldiMethod ──────────────────── v0.1.0 Installed Pango_jll ──────────────────────── v1.56.1+0 Installed JSON ───────────────────────────── v0.21.4 Installed PtrArrays ──────────────────────── v1.3.0 Installed CpuId ──────────────────────────── v0.3.1 Installed Xorg_xcb_util_keysyms_jll ──────── v0.4.0+1 Installed xkbcommon_jll ──────────────────── v1.4.1+2 Installed Bzip2_jll ──────────────────────── v1.0.9+0 Installed SpecialFunctions ───────────────── v2.5.1 Installed SimpleBufferStream ─────────────── v1.2.0 Installed XZ_jll ─────────────────────────── v5.8.1+0 Installed SentinelArrays ─────────────────── v1.4.8 Installed HarfBuzz_jll ───────────────────── v8.5.0+0 Installed PlotThemes ─────────────────────── v3.3.0 Installed IfElse ─────────────────────────── v0.1.1 Installed StaticArraysCore ───────────────── v1.4.3 Installed LZO_jll ────────────────────────── v2.10.3+0 Installed NaNMath ────────────────────────── v1.1.3 Installed ThreadingUtilities ─────────────── v0.5.3 Installed Clustering ─────────────────────── v0.15.8 Installed Zygote ─────────────────────────── v0.6.76 Installed fzf_jll ────────────────────────── v0.61.1+0 Installed FriBidi_jll ────────────────────── v1.0.17+0 Installed ManualMemory ───────────────────── v0.1.8 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed UnicodeFun ─────────────────────── v0.4.1 Installed TranscodingStreams ─────────────── v0.11.3 Installed MbedTLS ────────────────────────── v1.1.9 Installed GLFW_jll ───────────────────────── v3.4.0+2 Installed Ratios ─────────────────────────── v0.4.5 Installed CommonSubexpressions ───────────── v0.3.1 Installed x264_jll ───────────────────────── v2021.5.5+0 Installed Colors ─────────────────────────── v0.13.0 Installed DataStructures ─────────────────── v0.18.22 Installed MappedArrays ───────────────────── v0.4.2 Installed FreeType2_jll ──────────────────── v2.13.4+0 Installed ChainRules ─────────────────────── v1.72.3 Installed JLFzf ──────────────────────────── v0.1.11 Installed StatsAPI ───────────────────────── v1.7.0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed Compat ─────────────────────────── v4.16.0 Installed CodecZlib ──────────────────────── v0.7.8 Installed StaticArrayInterface ───────────── v1.8.0 Installed Xorg_libxcb_jll ────────────────── v1.17.1+0 Installed libpng_jll ─────────────────────── v1.6.47+0 Installed libaom_jll ─────────────────────── v3.11.0+0 Installed mtdev_jll ──────────────────────── v1.1.6+0 Installed StatsBase ──────────────────────── v0.33.21 Installed ExceptionUnwrapping ────────────── v0.1.11 Installed gperf_jll ──────────────────────── v3.1.1+1 Installed Dbus_jll ───────────────────────── v1.16.2+0 Installed Scratch ────────────────────────── v1.2.1 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed ColorTypes ─────────────────────── v0.12.1 Installed DiffRules ──────────────────────── v1.15.1 Installed eudev_jll ──────────────────────── v3.2.9+0 Installed oneTBB_jll ─────────────────────── v2022.0.0+0 Installed StatsPlots ─────────────────────── v0.15.7 Installed LayoutPointers ─────────────────── v0.1.17 Installed Xorg_libXext_jll ───────────────── v1.3.7+0 Installed ArgCheck ───────────────────────── v2.5.0 Installed Plots ──────────────────────────── v1.40.13 Installed TensorCore ─────────────────────── v0.1.1 Installed Zstd_jll ───────────────────────── v1.5.7+1 Installed MCPhylo ────────────────────────── v0.9.5 Installed TableTraits ────────────────────── v1.0.1 Installed Xorg_xcb_util_cursor_jll ───────── v0.1.4+0 Installed Expat_jll ──────────────────────── v2.6.5+0 Installed Inflate ────────────────────────── v0.1.5 Installed DiffResults ────────────────────── v1.1.0 Installed MKL_jll ────────────────────────── v2025.0.1+1 Installed HashArrayMappedTries ───────────── v0.2.0 Installed Parsers ────────────────────────── v2.8.2 Installed Setfield ───────────────────────── v1.1.2 Installed Libtiff_jll ────────────────────── v4.7.1+0 Installed Format ─────────────────────────── v1.3.7 Installed JLLWrappers ────────────────────── v1.7.0 Installed AbstractFFTs ───────────────────── v1.5.0 Installed ConstructionBase ───────────────── v1.5.8 Installed ColorVectorSpace ───────────────── v0.11.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed LoopVectorization ──────────────── v0.12.172 Installed Libffi_jll ─────────────────────── v3.2.2+2 Installed LLVMExtra_jll ──────────────────── v0.0.35+0 Installed AbstractTrees ──────────────────── v0.4.5 Installed Xorg_libXrender_jll ────────────── v0.9.12+0 Installed libevdev_jll ───────────────────── v1.11.0+0 Installed OrderedCollections ─────────────── v1.8.0 Installed libinput_jll ───────────────────── v1.18.0+0 Installed Ogg_jll ────────────────────────── v1.3.5+1 Installed KernelDensity ──────────────────── v0.6.9 Installed Xorg_libXi_jll ─────────────────── v1.8.2+0 Installed GR ─────────────────────────────── v0.73.14 Installed Vulkan_Loader_jll ──────────────── v1.3.243+0 Installed ChainRulesCore ─────────────────── v1.25.1 Installed Qt6ShaderTools_jll ─────────────── v6.7.1+1 Installed PolyesterWeave ─────────────────── v0.2.2 Installed ArrayInterface ─────────────────── v7.18.0 Installed Reexport ───────────────────────── v1.2.2 Installed Qt6Declarative_jll ─────────────── v6.7.1+2 Installed LogExpFunctions ────────────────── v0.3.29 Installed Interpolations ─────────────────── v0.15.1 Installed KernelAbstractions ─────────────── v0.9.34 Installed AliasTables ────────────────────── v1.1.3 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed FFTW_jll ───────────────────────── v3.3.11+0 Installed MbedTLS_jll ────────────────────── v2.28.6+2 Installed MacroTools ─────────────────────── v0.5.16 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed CompositionsBase ───────────────── v0.1.2 Installed UnPack ─────────────────────────── v1.0.2 Installed UnsafeAtomics ──────────────────── v0.3.0 Installed Xorg_libXcursor_jll ────────────── v1.2.3+0 Installed SparseInverseSubset ────────────── v0.1.2 Installed InverseFunctions ───────────────── v0.1.17 Installed MCPhyloTree ────────────────────── v1.1.7 Installed Libuuid_jll ────────────────────── v2.41.0+0 Installed CommonSolve ────────────────────── v0.2.4 Installed SimpleTraits ───────────────────── v0.9.4 Installed MultivariateStats ──────────────── v0.10.3 Installed GPUArraysCore ──────────────────── v0.2.0 Installed Wayland_protocols_jll ──────────── v1.36.0+0 Installed Atomix ─────────────────────────── v1.1.1 Installed DocStringExtensions ────────────── v0.9.4 Installed Xorg_xcb_util_renderutil_jll ───── v0.3.9+1 Installed Xorg_libICE_jll ────────────────── v1.1.2+0 Installed StableRNGs ─────────────────────── v1.0.2 Installed Adapt ──────────────────────────── v4.3.0 Installed Graphite2_jll ──────────────────── v1.3.15+0 Installed Pixman_jll ─────────────────────── v0.44.2+0 Installed libass_jll ─────────────────────── v0.15.2+0 Installed Widgets ────────────────────────── v0.6.7 Installed XML2_jll ───────────────────────── v2.13.6+1 Installed Rmath ──────────────────────────── v0.8.0 Installed Wayland_jll ────────────────────── v1.21.0+2 Installed Gettext_jll ────────────────────── v0.21.0+0 Installed Arpack_jll ─────────────────────── v3.5.1+1 Installed VectorizationBase ──────────────── v0.21.71 Installed Latexify ───────────────────────── v0.16.7 Installed Xorg_xtrans_jll ────────────────── v1.6.0+0 Installed BitFlags ───────────────────────── v0.1.9 Installed FFMPEG_jll ─────────────────────── v4.4.4+1 Installed Tables ─────────────────────────── v1.12.0 Installed CPUSummary ─────────────────────── v0.2.6 Installed Xorg_xkeyboard_config_jll ──────── v2.39.0+0 Installed LightGraphs ────────────────────── v1.3.5 Installed DataAPI ────────────────────────── v1.16.0 Installed LLVMOpenMP_jll ─────────────────── v18.1.7+0 Installed FixedPointNumbers ──────────────── v0.8.5 Installed Xorg_libXrandr_jll ─────────────── v1.5.5+0 Installed RecipesBase ────────────────────── v1.3.4 Installed Xorg_libXfixes_jll ─────────────── v6.0.1+0 Installed TableOperations ────────────────── v1.2.0 Installed LAME_jll ───────────────────────── v3.100.2+0 Installed Qt6Wayland_jll ─────────────────── v6.7.1+1 Installed ReverseDiff ────────────────────── v1.16.1 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed Qt6Base_jll ────────────────────── v6.7.1+1 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed URIs ───────────────────────────── v1.5.2 Installed StructArrays ───────────────────── v0.7.1 Installed PrecompileTools ────────────────── v1.3.2 Installed LaTeXStrings ───────────────────── v1.4.0 Installed HostCPUFeatures ────────────────── v0.1.17 Installed libvorbis_jll ──────────────────── v1.3.7+2 Installed Glib_jll ───────────────────────── v2.82.4+0 Installed Arpack ─────────────────────────── v0.5.4 Installed Libglvnd_jll ───────────────────── v1.7.1+1 Installed AxisAlgorithms ─────────────────── v1.1.0 Installed QuadGK ─────────────────────────── v2.11.2 Installed Xorg_libX11_jll ────────────────── v1.8.12+0 Installed FillArrays ─────────────────────── v1.13.0 Installed ForwardDiff ────────────────────── v0.10.38 Installed Requires ───────────────────────── v1.3.1 Installed Xorg_libXdmcp_jll ──────────────── v1.1.6+0 Installed Observables ────────────────────── v0.5.5 Installed Unzip ──────────────────────────── v0.2.0 Installed WoodburyMatrices ───────────────── v1.0.0 Installed Distributions ──────────────────── v0.25.119 Installed ChangesOfVariables ─────────────── v0.1.9 Installed UnitfulLatexify ────────────────── v1.6.4 Installed SortingAlgorithms ──────────────── v1.2.1 Installing 84 artifacts Installed artifact Expat 271.4 KiB Installed artifact gperf 119.3 KiB Installed artifact LZO 208.9 KiB Installed artifact Ogg 257.2 KiB Installed artifact Pixman 372.2 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Xorg_xcb_util_keysyms 25.8 KiB Installed artifact libinput 853.5 KiB Installed artifact x265 1.1 MiB Installed artifact Xorg_xcb_util 46.4 KiB Installed artifact FFMPEG 10.6 MiB Installed artifact oneTBB 435.6 KiB Installed artifact libdecor 44.1 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact LAME 292.5 KiB Installed artifact Zstd 646.0 KiB Installed artifact libaom 6.4 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact Qt6Wayland 2.0 MiB Installed artifact Libmount 6.4 MiB Installed artifact Xorg_xcb_util_image 61.6 KiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact Libuuid 3.5 MiB Installed artifact LLVMExtra 3.1 MiB Installed artifact Xorg_xkeyboard_config 544.2 KiB Installed artifact libevdev 121.2 KiB Installed artifact Glib 7.6 MiB Installed artifact Qt6Declarative 18.6 MiB Installed artifact Fontconfig 522.5 KiB Installed artifact Xorg_xcb_util_cursor 57.0 KiB Installed artifact xkbcommon 509.6 KiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact Wayland_protocols 129.5 KiB Installed artifact Wayland 406.1 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact Pango 1.1 MiB Installed artifact MbedTLS 2.1 MiB Installed artifact Libffi 34.1 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact eudev 3.1 MiB Installed artifact Cairo 2.2 MiB Installed artifact Xorg_xcb_util_wm 155.8 KiB Installed artifact Xorg_libXfixes 195.9 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact x264 2.0 MiB Installed artifact Rmath 121.9 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact fzf 3.3 MiB Installed artifact Libiconv 1.9 MiB Installed artifact FFTW 2.2 MiB Installed artifact Gettext 4.5 MiB Installed artifact LERC 272.9 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact libvorbis 271.0 KiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact Libtiff 3.2 MiB Installed artifact GLFW 180.1 KiB Installed artifact Qt6Base 19.8 MiB Installed artifact Xorg_xcb_util_renderutil 39.0 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact libass 372.4 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Bzip2 503.5 KiB Installed artifact Arpack 147.2 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact mtdev 86.4 KiB Installed artifact Opus 908.1 KiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Dbus 489.8 KiB Installed artifact FreeType2 1.5 MiB Installed artifact FriBidi 78.9 KiB Installed artifact Graphite2 120.2 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact XML2 2.5 MiB Installed artifact libpng 328.5 KiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact XZ 1.5 MiB Installed artifact Qt6ShaderTools 2.0 MiB Installed artifact GR 17.1 MiB Installed artifact Xorg_libxcb 2.1 MiB Updating `~/.julia/environments/v1.13/Project.toml` [af0ac7d2] + MCPhylo v0.9.5 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 ⌅ [ec485272] + ArnoldiMethod v0.1.0 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.18.0 [a9b6321e] + Atomix v1.1.1 [13072b0f] + AxisAlgorithms v1.1.0 ⌅ [76274a88] + Bijectors v0.10.8 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [9e997f8a] + ChangesOfVariables v0.1.9 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.29.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.0 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.2 [7a1cc6ca] + FFTW v1.8.1 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 ⌅ [d9f16b24] + Functors v0.3.0 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [28b8d3ca] + GR v0.73.14 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.16 [076d061b] + HashArrayMappedTries v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.14 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [a98d9a8b] + Interpolations v0.15.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [63c18a36] + KernelAbstractions v0.9.34 [5ab0869b] + KernelDensity v0.6.9 [929cbde3] + LLVM v9.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.7 [10f19ff3] + LayoutPointers v0.1.17 [093fc24a] + LightGraphs v1.3.5 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [bdcacae8] + LoopVectorization v0.12.172 [af0ac7d2] + MCPhylo v0.9.5 [e53f0ae0] + MCPhyloTree v1.1.7 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.2 [e1d29d7a] + Missings v1.2.0 [6f286f6a] + MultivariateStats v0.10.3 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.21 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.4.3 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.34 [69de0a69] + Parsers v2.8.2 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.3 [91a5bcdd] + Plots v1.40.13 [1d0040c9] + PolyesterWeave v0.2.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [37e2e3b7] + ReverseDiff v1.16.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.7 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [7e506255] + ScopedValues v1.3.0 [6c6a2e73] + Scratch v1.2.1 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.1 [860ef19b] + StableRNGs v1.0.2 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.4.0 [f3b207a7] + StatsPlots v0.15.7 [09ab397b] + StructArrays v0.7.1 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.3 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.5.2 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.22.0 [45397f5d] + UnitfulLatexify v1.6.4 [013be700] + UnsafeAtomics v0.3.0 [41fe7b60] + Unzip v0.2.0 [3d5dd08c] + VectorizationBase v0.21.71 [cc8bc4a8] + Widgets v0.6.7 [efce3f68] + WoodburyMatrices v1.0.0 ⌅ [e88e6eb3] + Zygote v0.6.76 [700de1a5] + ZygoteRules v0.2.7 ⌅ [68821587] + Arpack_jll v3.5.1+1 [6e34b625] + Bzip2_jll v1.0.9+0 ⌃ [83423d85] + Cairo_jll v1.18.4+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.6.5+0 ⌅ [b22a6f82] + FFMPEG_jll v4.4.4+1 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.16.0+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.0+2 [d2c73de3] + GR_jll v0.73.14+0 [78b55507] + Gettext_jll v0.21.0+0 ⌃ [7746bdde] + Glib_jll v2.82.4+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [c1c5ebd0] + LAME_jll v3.100.2+0 [88015f11] + LERC_jll v4.0.1+0 [dad2f222] + LLVMExtra_jll v0.0.35+0 [1d63c593] + LLVMOpenMP_jll v18.1.7+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.2.2+2 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.0+0 [89763e89] + Libtiff_jll v4.7.1+0 [38a345b3] + Libuuid_jll v2.41.0+0 [856f044c] + MKL_jll v2025.0.1+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [e7412a2a] + Ogg_jll v1.3.5+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.3.3+0 [36c8627f] + Pango_jll v1.56.1+0 [30392449] + Pixman_jll v0.44.2+0 ⌅ [c0090381] + Qt6Base_jll v6.7.1+1 ⌅ [629bc702] + Qt6Declarative_jll v6.7.1+2 ⌅ [ce943373] + Qt6ShaderTools_jll v6.7.1+1 ⌃ [e99dba38] + Qt6Wayland_jll v6.7.1+1 [f50d1b31] + Rmath_jll v0.5.1+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 ⌃ [a2964d1f] + Wayland_jll v1.21.0+2 [2381bf8a] + Wayland_protocols_jll v1.36.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.3+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] + Xorg_libXi_jll v1.8.2+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.4+0 [12413925] + Xorg_xcb_util_image_jll v0.4.0+1 [2def613f] + Xorg_xcb_util_jll v0.4.0+1 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.39.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [35ca27e7] + eudev_jll v3.2.9+0 [214eeab7] + fzf_jll v0.61.1+0 [1a1c6b14] + gperf_jll v3.1.1+1 [a4ae2306] + libaom_jll v3.11.0+0 [0ac62f75] + libass_jll v0.15.2+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.11.0+0 [f638f0a6] + libfdk_aac_jll v2.0.3+0 [36db933b] + libinput_jll v1.18.0+0 [b53b4c65] + libpng_jll v1.6.47+0 [f27f6e37] + libvorbis_jll v1.3.7+2 [009596ad] + mtdev_jll v1.1.6+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 ⌅ [1270edf5] + x264_jll v2021.5.5+0 ⌅ [dfaa095f] + x265_jll v3.5.0+0 [d8fb68d0] + xkbcommon_jll v1.4.1+2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 66.69s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 1753.5 ms ✓ FunctionWrappers 891.8 ms ✓ ChangesOfVariables 1086.5 ms ✓ AbstractFFTs 922.3 ms ✓ LaTeXStrings 3760.6 ms ✓ UnsafeAtomics 721.4 ms ✓ IteratorInterfaceExtensions 916.3 ms ✓ TensorCore 848.4 ms ✓ StatsAPI 872.1 ms ✓ Contour 918.4 ms ✓ CEnum 1740.2 ms ✓ OffsetArrays 2410.6 ms ✓ Format 778.9 ms ✓ UnPack 4380.4 ms ✓ FillArrays 1229.3 ms ✓ Measures 888.3 ms ✓ InverseFunctions 1197.6 ms ✓ Statistics 747.9 ms ✓ CommonSolve 865.7 ms ✓ ArgCheck 4386.6 ms ✓ MacroTools 1283.2 ms ✓ Grisu 867.8 ms ✓ ManualMemory 1219.6 ms ✓ OrderedCollections 1022.7 ms ✓ Observables 1182.4 ms ✓ Requires 729.1 ms ✓ DataValueInterfaces 840.3 ms ✓ RealDot 1034.6 ms ✓ StableRNGs 1018.7 ms ✓ Unzip 739.0 ms ✓ Reexport 703.4 ms ✓ SIMDTypes 1052.1 ms ✓ DocStringExtensions 1033.7 ms ✓ AbstractTrees 2165.8 ms ✓ IrrationalConstants 1179.4 ms ✓ URIs 810.1 ms ✓ SimpleBufferStream 837.1 ms ✓ CompositionsBase 784.3 ms ✓ PtrArrays 1187.1 ms ✓ TranscodingStreams 863.3 ms ✓ HashArrayMappedTries 993.1 ms ✓ NaNMath 981.2 ms ✓ DelimitedFiles 937.4 ms ✓ Inflate 736.3 ms ✓ IfElse 1041.2 ms ✓ ConstructionBase 767.5 ms ✓ CommonWorldInvalidations 852.3 ms ✓ DataAPI 831.1 ms ✓ BitFlags 988.0 ms ✓ Functors 908.5 ms ✓ StaticArraysCore 942.2 ms ✓ MappedArrays 1373.4 ms ✓ SuiteSparse 1848.4 ms ✓ ConcurrentUtilities 1886.6 ms ✓ ProgressMeter 1457.2 ms ✓ WoodburyMatrices 4067.7 ms ✓ SentinelArrays 36149.5 ms ✓ Unitful 952.1 ms ✓ Scratch 1135.0 ms ✓ LoggingExtras 4393.1 ms ✓ CpuId 1250.8 ms ✓ Preferences 1202.5 ms ✓ Compat 3960.5 ms ✓ UnicodeFun 2290.2 ms ✓ ExceptionUnwrapping 3976.4 ms ✓ ChangesOfVariables → ChangesOfVariablesTestExt 4184.4 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1018.4 ms ✓ Atomix 825.3 ms ✓ TableTraits 4641.8 ms ✓ FillArrays → FillArraysSparseArraysExt 2068.8 ms ✓ InverseFunctions → InverseFunctionsTestExt 963.5 ms ✓ InverseFunctions → InverseFunctionsDatesExt 892.8 ms ✓ ChangesOfVariables → ChangesOfVariablesInverseFunctionsExt 3835.9 ms ✓ FixedPointNumbers 1502.2 ms ✓ Distances 1387.8 ms ✓ Statistics → SparseArraysExt 995.1 ms ✓ FillArrays → FillArraysStatisticsExt 1576.0 ms ✓ CommonSubexpressions 6453.9 ms ✓ IRTools 4322.7 ms ✓ SimpleTraits 965.5 ms ✓ Showoff 1837.6 ms ✓ ThreadingUtilities 852.6 ms ✓ Ratios 992.4 ms ✓ Adapt 7038.3 ms ✓ Latexify 1534.9 ms ✓ LogExpFunctions 946.1 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1047.4 ms ✓ AliasTables 1014.9 ms ✓ CodecZlib 822.4 ms ✓ ScopedValues 915.2 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1079.4 ms ✓ Missings 4090.7 ms ✓ OpenSSL 900.7 ms ✓ DiffResults 1733.2 ms ✓ PDMats 1291.7 ms ✓ SparseInverseSubset 1421.4 ms ✓ AxisAlgorithms 2560.4 ms ✓ Unitful → ConstructionBaseUnitfulExt 2501.0 ms ✓ Unitful → InverseFunctionsUnitfulExt 1219.1 ms ✓ RelocatableFolders 1152.3 ms ✓ JLLWrappers 1001.9 ms ✓ PrecompileTools 925.3 ms ✓ Compat → CompatLinearAlgebraExt 1659.5 ms ✓ Tables 2718.8 ms ✓ ColorTypes 1400.4 ms ✓ Distances → DistancesSparseArraysExt 992.3 ms ✓ Ratios → RatiosFixedPointNumbersExt 1353.8 ms ✓ Adapt → AdaptSparseArraysExt 1177.5 ms ✓ ArrayInterface 1182.8 ms ✓ GPUArraysCore 959.5 ms ✓ OffsetArrays → OffsetArraysAdaptExt 3011.5 ms ✓ Latexify → SparseArraysExt 7337.8 ms ✓ UnitfulLatexify 943.4 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 932.4 ms ✓ LogExpFunctions → LogExpFunctionsChangesOfVariablesExt 3403.7 ms ✓ Setfield 5082.6 ms ✓ Accessors 1462.7 ms ✓ FillArrays → FillArraysPDMatsExt 1343.9 ms ✓ Graphite2_jll 1477.6 ms ✓ Libmount_jll 1148.9 ms ✓ EpollShim_jll 1384.5 ms ✓ LLVMOpenMP_jll 1363.1 ms ✓ Bzip2_jll 1393.3 ms ✓ Rmath_jll 1363.9 ms ✓ Xorg_libICE_jll 1345.3 ms ✓ Xorg_libXau_jll 1358.2 ms ✓ libpng_jll 1312.8 ms ✓ libfdk_aac_jll 6638.6 ms ✓ IntelOpenMP_jll 1408.6 ms ✓ LAME_jll 1396.9 ms ✓ LERC_jll 1332.0 ms ✓ fzf_jll 1400.0 ms ✓ JpegTurbo_jll 1598.8 ms ✓ XZ_jll 1340.7 ms ✓ Ogg_jll 1364.5 ms ✓ mtdev_jll 1370.7 ms ✓ gperf_jll 1374.3 ms ✓ oneTBB_jll 1324.9 ms ✓ Xorg_libXdmcp_jll 1322.8 ms ✓ x265_jll 1390.4 ms ✓ x264_jll 7098.1 ms ✓ LLVMExtra_jll 1335.8 ms ✓ libaom_jll 1382.1 ms ✓ MbedTLS_jll 1395.6 ms ✓ Arpack_jll 1399.0 ms ✓ Zstd_jll 1386.2 ms ✓ Expat_jll 1356.4 ms ✓ LZO_jll 1324.4 ms ✓ Opus_jll 1246.5 ms ✓ Xorg_xtrans_jll 1393.7 ms ✓ libevdev_jll 1408.8 ms ✓ Libiconv_jll 1360.5 ms ✓ Libffi_jll 1219.8 ms ✓ Wayland_protocols_jll 1343.2 ms ✓ FFTW_jll 1315.8 ms ✓ OpenSpecFun_jll 1355.2 ms ✓ Libuuid_jll 1378.7 ms ✓ FriBidi_jll 14094.6 ms ✓ StaticArrays 2907.9 ms ✓ RecipesBase 18128.7 ms ✓ Parsers 7029.7 ms ✓ Static 6373.4 ms ✓ DataStructures 2860.9 ms ✓ ChainRulesCore 1696.2 ms ✓ StructArrays 4004.9 ms ✓ TableOperations 3940.8 ms ✓ ColorVectorSpace 1534.3 ms ✓ ColorTypes → StyledStringsExt 9102.4 ms ✓ Colors 1315.5 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 853.2 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 918.0 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 2191.2 ms ✓ Accessors → LinearAlgebraExt 2213.7 ms ✓ Accessors → TestExt 2861.6 ms ✓ Accessors → UnitfulExt 1409.4 ms ✓ Pixman_jll 1617.6 ms ✓ FreeType2_jll 1820.4 ms ✓ Rmath 1646.9 ms ✓ Xorg_libSM_jll 3710.5 ms ✓ JLFzf 1650.9 ms ✓ libvorbis_jll 1598.4 ms ✓ eudev_jll 10000.7 ms ✓ MKL_jll 1623.3 ms ✓ Xorg_libxcb_jll 22449.2 ms ✓ LLVM 2350.3 ms ✓ MbedTLS 1621.3 ms ✓ Arpack 1825.7 ms ✓ Libtiff_jll 2348.9 ms ✓ Dbus_jll 2355.9 ms ✓ XML2_jll 5677.9 ms ✓ SpecialFunctions 4002.9 ms ✓ ArnoldiMethod 1675.2 ms ✓ StaticArrays → StaticArraysStatisticsExt 1683.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1670.5 ms ✓ Adapt → AdaptStaticArraysExt 1891.4 ms ✓ Accessors → StaticArraysExt 3985.5 ms ✓ JSON 1036.3 ms ✓ BitTwiddlingConvenienceFunctions 5327.3 ms ✓ CPUSummary 14250.5 ms ✓ StaticArrayInterface 2807.4 ms ✓ SortingAlgorithms 3833.7 ms ✓ QuadGK 4308.5 ms ✓ MCPhyloTree 1416.5 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2644.3 ms ✓ ZygoteRules 1008.6 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 1031.5 ms ✓ Distances → DistancesChainRulesCoreExt 3426.4 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 988.6 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1738.1 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 999.0 ms ✓ StructArrays → StructArraysAdaptExt 1472.1 ms ✓ StructArrays → StructArraysSparseArraysExt 1918.3 ms ✓ StructArrays → StructArraysStaticArraysExt 1104.0 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1333.6 ms ✓ Accessors → StructArraysExt 2045.9 ms ✓ Widgets 7693.7 ms ✓ ColorSchemes 1371.5 ms ✓ FiniteDiff 6745.6 ms ✓ Roots 1726.1 ms ✓ Fontconfig_jll 1662.9 ms ✓ libinput_jll 7099.7 ms ✓ FFTW 1619.4 ms ✓ Xorg_xcb_util_jll 1615.7 ms ✓ Xorg_libX11_jll 9974.6 ms ✓ UnsafeAtomics → UnsafeAtomicsLLVM HTTP Waiting for background task / IO / timer. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1257] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. 158517.6 ms ✓ HTTP 1599.6 ms ✓ Gettext_jll 1609.5 ms ✓ Wayland_jll 4356.0 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2645.0 ms ✓ HypergeometricFunctions 1347.2 ms ✓ DiffRules 1937.4 ms ✓ ColorVectorSpace → SpecialFunctionsExt 4130.7 ms ✓ NearestNeighbors 12074.9 ms ✓ LightGraphs 9527.0 ms ✓ KernelAbstractions 3732.4 ms ✓ HostCPUFeatures 5139.3 ms ✓ PolyesterWeave 3494.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 2853.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 3705.8 ms ✓ CloseOpenIntervals 3546.2 ms ✓ LayoutPointers 9886.2 ms ✓ StatsBase 4607.9 ms ✓ Interpolations 12641.4 ms ✓ ChainRules 17968.8 ms ✓ PlotUtils 1330.4 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1617.0 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1406.4 ms ✓ Roots → RootsChainRulesCoreExt 1595.6 ms ✓ Xorg_xcb_util_image_jll 1596.3 ms ✓ Xorg_xcb_util_keysyms_jll 1604.0 ms ✓ Xorg_xcb_util_renderutil_jll 1585.8 ms ✓ Xorg_xcb_util_wm_jll 1730.6 ms ✓ Xorg_libXrender_jll 1587.4 ms ✓ Xorg_libXext_jll 1597.2 ms ✓ Xorg_libXfixes_jll 1577.0 ms ✓ Xorg_libxkbfile_jll 1660.4 ms ✓ Glib_jll 3293.7 ms ✓ StatsFuns 9498.9 ms ✓ ForwardDiff 3390.1 ms ✓ KernelAbstractions → SparseArraysExt 2954.7 ms ✓ KernelAbstractions → LinearAlgebraExt 3068.9 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 19058.2 ms ✓ VectorizationBase 9358.5 ms ✓ Clustering 4145.0 ms ✓ Interpolations → InterpolationsUnitfulExt 2007.7 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 9946.0 ms ✓ PlotThemes 9810.7 ms ✓ RecipesPipeline 1575.6 ms ✓ Xorg_xcb_util_cursor_jll 1566.4 ms ✓ Xorg_libXinerama_jll 1570.5 ms ✓ Xorg_libXrandr_jll 1583.1 ms ✓ Libglvnd_jll 1565.7 ms ✓ Xorg_libXcursor_jll 1564.7 ms ✓ Xorg_libXi_jll 1570.6 ms ✓ Xorg_xkbcomp_jll 1776.2 ms ✓ Cairo_jll 1324.1 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3817.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 14631.9 ms ✓ Distributions 4067.9 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1887.7 ms ✓ Roots → RootsForwardDiffExt 16869.7 ms ✓ GPUArrays 6264.8 ms ✓ SLEEFPirates 1396.9 ms ✓ Xorg_xkeyboard_config_jll 1655.2 ms ✓ HarfBuzz_jll 6164.5 ms ✓ Distributions → DistributionsTestExt 5802.3 ms ✓ Distributions → DistributionsChainRulesCoreExt 8719.5 ms ✓ MultivariateStats 39622.6 ms ✓ ReverseDiff ✗ Zygote 48391.6 ms ✓ LoopVectorization 1646.3 ms ✓ xkbcommon_jll 1755.1 ms ✓ libass_jll 1726.8 ms ✓ Pango_jll 7889.3 ms ✓ KernelDensity 13193.9 ms ✓ Bijectors 9573.0 ms ✓ ArrayInterface → ArrayInterfaceReverseDiffExt ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt 6124.3 ms ✓ LoopVectorization → SpecialFunctionsExt 6425.3 ms ✓ LoopVectorization → ForwardDiffExt 1647.1 ms ✓ Vulkan_Loader_jll 1804.8 ms ✓ FFMPEG_jll 1740.1 ms ✓ libdecor_jll 1788.8 ms ✓ Qt6Base_jll 1521.7 ms ✓ FFMPEG 1726.8 ms ✓ GLFW_jll 1761.6 ms ✓ Qt6ShaderTools_jll 2039.5 ms ✓ GR_jll 1855.7 ms ✓ Qt6Declarative_jll 1827.4 ms ✓ Qt6Wayland_jll 6771.1 ms ✓ GR 117569.3 ms ✓ Plots 24408.9 ms ✓ Plots → UnitfulExt 28028.0 ms ✓ StatsPlots ✗ MCPhylo 311 dependencies successfully precompiled in 1494 seconds. 39 already precompiled. 5 dependencies had output during precompilation: ┌ VectorizationBase │ WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. │ Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. │ WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. │ Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. │ WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. │ Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. │ WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. │ Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. │ WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. │ Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. │ WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. │ Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. │ WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. │ WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Bool end`. │ Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. │ WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. │ Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. │ WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. │ Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. │ WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. │ Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. │ WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. │ Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. └ ┌ StableRNGs │ WARNING: Constructor for type "Sampler" was extended in `StableRNGs` without explicit qualification or import. │ NOTE: Assumed "Sampler" refers to `Random.Sampler`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Sampler end`. │ Hint: To silence the warning, qualify `Sampler` as `Random.Sampler` in the method signature or explicitly `import Random: Sampler`. └ ┌ IRTools │ WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Inner. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ┌ HTTP │ ┌ Info: Ignoring an error that occurred during the precompilation workload │ │ exception = │ │ HTTP.ConnectError for url = `https://localhost:57813`: TimeoutException: try_with_timeout timed out after 30.0 seconds │ │ Stacktrace: │ │ [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:88 │ │ [2] connections │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:60 [inlined] │ │ [3] (::Base.var"#47#48"{Base.var"#49#50"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ Base ./error.jl:311 │ │ [4] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.RetryRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:75 │ │ [5] manageretries │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:30 [inlined] │ │ [6] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.CookieRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:42 │ │ [7] managecookies │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:19 [inlined] │ │ [8] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Nothing, decompress::Nothing, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.HeadersRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:71 │ │ [9] defaultheaders │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:14 [inlined] │ │ [10] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.RedirectRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:25 │ │ [11] redirects │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:14 [inlined] │ │ [12] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Nothing, body::Vector{UInt8}; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{}) │ │ @ HTTP.MessageRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:35 │ │ [13] makerequest │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:24 [inlined] │ │ [14] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing; headers::Nothing, body::Vector{UInt8}, query::Nothing, kw::@Kwargs{}) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:457 │ │ [15] request(stack::Function, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:455 │ │ [16] #request#21 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:315 [inlined] │ │ [17] request (repeats 2 times) │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:313 [inlined] │ │ [18] get │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:518 [inlined] │ │ [19] #51 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:36 [inlined] │ │ [20] withenv(::HTTP.var"#51#52"{String}, ::Pair{String, Union{Nothing, String}}, ::Vararg{Pair{String, Union{Nothing, String}}}) │ │ @ Base ./env.jl:265 │ │ [21] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:35 [inlined] │ │ [22] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] │ │ [23] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:34 [inlined] │ │ [24] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] │ │ [25] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:4 │ │ [26] include(mapexpr::Function, mod::Module, _path::String) │ │ @ Base ./Base.jl:304 │ │ [27] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:643 │ │ [28] include(mod::Module, _path::String) │ │ @ Base ./Base.jl:303 │ │ [29] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ │ @ Base ./loading.jl:2978 │ │ [30] top-level scope │ │ @ stdin:5 │ │ [31] eval(m::Module, e::Any) │ │ @ Core ./boot.jl:489 │ │ [32] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ │ @ Base ./loading.jl:2824 │ │ [33] include_string │ │ @ ./loading.jl:2834 [inlined] │ │ [34] exec_options(opts::Base.JLOptions) │ │ @ Base ./client.jl:329 │ │ [35] _start() │ └ @ Base ./client.jl:563 │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1257] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. └ ERROR: LoadError: The following 1 direct dependency failed to precompile: MCPhylo Failed to precompile MCPhylo [af0ac7d2-842d-415f-bd76-8183c117c674] to "/home/pkgeval/.julia/compiled/v1.13/MCPhylo/jl_1jMK0P" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] IncludeInto @ ./Base.jl:305 [inlined] [4] macro expansion @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined] [5] precompile() @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63 [6] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84 [7] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [8] include(mod::Module, _path::String) @ Base ./Base.jl:303 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [13] include_string @ ./loading.jl:2834 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_gmJHE0" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#233 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:23 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1369.9s ################################################################################ # Loading # Loading MCPhylo... Precompiling packages... ✗ Zygote ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt Info Given MCPhylo was explicitly requested, output will be shown live  WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [3] IncludeInto  @ ./Base.jl:305 [inlined]  [4] macro expansion  @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined]  [5] precompile()  @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63  [6] top-level scope  @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84  [7] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [8] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2978  [10] top-level scope  @ stdin:5  [11] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [13] include_string  @ ./loading.jl:2834 [inlined]  [14] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [15] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_UD3AeL" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3265  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2651  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1279  [8] #invokelatest_gr#233  @ ./reflection.jl:1287 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1281 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3836  [11] maybe_cachefile_lock  @ ./loading.jl:3833 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2637  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2465  [14] macro expansion  @ ./loading.jl:2393 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2358  [17] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2334  [18] top-level scope  @ ~/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:23  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [24] include_string  @ ./loading.jl:2834 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [26] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:1 in expression starting at stdin:5 ✗ MCPhylo 0 dependencies successfully precompiled in 164 seconds. 350 already precompiled. ERROR: The following 1 direct dependency failed to precompile: MCPhylo Failed to precompile MCPhylo [af0ac7d2-842d-415f-bd76-8183c117c674] to "/home/pkgeval/.julia/compiled/v1.13/MCPhylo/jl_o8TpZ5" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] IncludeInto @ ./Base.jl:305 [inlined] [4] macro expansion @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined] [5] precompile() @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63 [6] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84 [7] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [8] include(mod::Module, _path::String) @ Base ./Base.jl:303 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [13] include_string @ ./loading.jl:2834 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_UD3AeL" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#233 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:23 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MCPhylo/KWPlY/src/MCPhylo.jl:1 in expression starting at stdin: Loading failed after 166.17s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using MCPhylo'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1771.21s: package fails to precompile