Package evaluation to load SpatialEcology on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T08:50:51.938 ################################################################################ # Set-up # Set-up completed after 0.11s ################################################################################ # Installation # Installing SpatialEcology... Resolving package versions... Installed AliasTables ───────────────── v1.1.3 Installed InlineStrings ─────────────── v1.4.5 Installed OrderedCollections ────────── v1.8.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed MacroTools ────────────────── v0.5.16 Installed Compat ────────────────────── v4.18.1 Installed DataStructures ────────────── v0.19.3 Installed StatsBase ─────────────────── v0.34.7 Installed InvertedIndices ───────────── v1.3.1 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed StatsAPI ──────────────────── v1.7.1 Installed EcoBase ───────────────────── v0.1.7 Installed RandomNumbers ─────────────── v1.6.0 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed SentinelArrays ────────────── v1.4.8 Installed IrrationalConstants ───────── v0.2.6 Installed StringManipulation ────────── v0.4.1 Installed Distances ─────────────────── v0.10.12 Installed LogExpFunctions ───────────── v0.3.29 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.3.0 Installed Chain ─────────────────────── v0.5.0 Installed DataFramesMeta ────────────── v0.14.1 Installed PrettyTables ──────────────── v3.1.0 Installed RandomBooleanMatrices ─────── v0.1.2 Installed Reexport ──────────────────── v1.2.2 Installed DataFrames ────────────────── v1.8.1 Installed Missings ──────────────────── v1.2.0 Installed PooledArrays ──────────────── v1.4.3 Installed Preferences ───────────────── v1.5.0 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed Crayons ───────────────────── v4.1.1 Installed DocStringExtensions ───────── v0.9.5 Installed SortingAlgorithms ─────────── v1.2.2 Installed SpatialEcology ────────────── v0.9.16 Updating `~/.julia/environments/v1.14/Project.toml` [348f2d5d] + SpatialEcology v0.9.16 Updating `~/.julia/environments/v1.14/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 ⌅ [8be319e6] + Chain v0.5.0 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [1313f7d8] + DataFramesMeta v0.14.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [a58aae7d] + EcoBase v0.1.7 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [43287f4e] + PtrArrays v1.3.0 [9ae346a0] + RandomBooleanMatrices v0.1.2 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.2 [348f2d5d] + SpatialEcology v0.9.16 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 4017.3 ms ✓ MacroTools 1644.1 ms ✓ InlineStrings 776.2 ms ✓ Reexport 1090.9 ms ✓ Statistics 875.0 ms ✓ DataAPI 2151.2 ms ✓ IrrationalConstants 818.9 ms ✓ Chain 765.2 ms ✓ DataValueInterfaces 835.0 ms ✓ StatsAPI 1241.5 ms ✓ OrderedCollections 850.4 ms ✓ InvertedIndices 1523.0 ms ✓ RandomNumbers 1126.2 ms ✓ DocStringExtensions 1415.4 ms ✓ PtrArrays 812.7 ms ✓ IteratorInterfaceExtensions 1055.3 ms ✓ LaTeXStrings 1833.3 ms ✓ Crayons 2471.3 ms ✓ SentinelArrays 978.5 ms ✓ Compat 1018.7 ms ✓ Preferences 1350.5 ms ✓ Statistics → SparseArraysExt 1034.4 ms ✓ Missings 1032.1 ms ✓ PooledArrays 1393.0 ms ✓ Distances 3561.4 ms ✓ DataStructures 1390.8 ms ✓ LogExpFunctions 987.2 ms ✓ AliasTables 852.2 ms ✓ TableTraits 953.4 ms ✓ Compat → CompatLinearAlgebraExt 1002.6 ms ✓ PrecompileTools 1414.0 ms ✓ Distances → DistancesSparseArraysExt 1112.9 ms ✓ SortingAlgorithms 1811.1 ms ✓ Tables 2930.3 ms ✓ RecipesBase 3162.6 ms ✓ StringManipulation 4560.5 ms ✓ StatsBase 1452.8 ms ✓ EcoBase 38053.5 ms ✓ PrettyTables 1530.4 ms ✓ RandomBooleanMatrices 80346.1 ms ✓ DataFrames 5875.2 ms ✓ DataFramesMeta WARNING: Imported binding DataFrames.aggregate was undeclared at import time during import to SpatialEcology. ERROR: LoadError: invalid method definition in SpatialEcology: exported function DataFrames.aggregate does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/SpatialEcology/2IBpN/src/Operations.jl:4  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/SpatialEcology/2IBpN/src/SpatialEcology.jl:53  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [9] include_string  @ ./loading.jl:3004 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/SpatialEcology/2IBpN/src/Operations.jl:4 in expression starting at /home/pkgeval/.julia/packages/SpatialEcology/2IBpN/src/SpatialEcology.jl:2 in expression starting at stdin:5 Precompilation completed after 195.78s ################################################################################ # Loading # Loading SpatialEcology... WARNING: Imported binding DataFrames.aggregate was undeclared at import time during import to SpatialEcology. ERROR: LoadError: invalid method definition in SpatialEcology: exported function DataFrames.aggregate does not exist Stacktrace:  [1] top-level scope  @ ~/.julia/packages/SpatialEcology/2IBpN/src/Operations.jl:4  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/SpatialEcology/2IBpN/src/SpatialEcology.jl:53  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [9] include_string  @ ./loading.jl:3004 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/SpatialEcology/2IBpN/src/Operations.jl:4 in expression starting at /home/pkgeval/.julia/packages/SpatialEcology/2IBpN/src/SpatialEcology.jl:2 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ SpatialEcology │ [Output was shown above] └ ERROR: The following 1 package failed to precompile: SpatialEcology Failed to precompile SpatialEcology [348f2d5d-71a3-5ad4-b565-8af070f99681] to "/home/pkgeval/.julia/compiled/v1.14/SpatialEcology/jl_xWQyky" (ProcessExited(1)). Loading failed after 9.04s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using SpatialEcology'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 234.32s: package fails to precompile