Package evaluation to load MolecularGraphKernels on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T10:57:39.770 ################################################################################ # Set-up # Set-up completed after 0.14s ################################################################################ # Installation # Installing MolecularGraphKernels... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [bf3818bd] + MolecularGraphKernels v0.11.0 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [ec485272] + ArnoldiMethod v0.2.0 [159f3aea] + Cairo v1.1.1 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.3 [34da2185] + Compat v4.18.1 [a81c6b42] + Compose v0.9.6 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [5789e2e9] + FileIO v1.17.1 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [a2cc645c] + GraphPlot v0.5.2 [a2bd30eb] + Graphics v1.1.3 ⌃ [86223c79] + Graphs v1.9.0 [d25df0c9] + Inflate v0.1.5 [c8e1da08] + IterTools v1.10.0 ⌅ [033835bb] + JLD2 v0.4.55 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [fc18253b] + LazyJSON v0.2.2 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.3 [6fafb56a] + Memoization v0.2.2 ⌅ [626554b9] + MetaGraphs v0.7.2 [e1d29d7a] + Missings v1.2.0 ⌅ [6c89ec66] + MolecularGraph v0.13.0 [bf3818bd] + MolecularGraphKernels v0.11.0 [77ba4419] + NaNMath v1.1.3 [4d1e1d77] + Nullables v1.0.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [91cefc8d] + PrecompileSignatures v3.0.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [92933f4c] + ProgressMeter v1.11.0 ⌅ [f8a19df8] + PropertyDicts v0.1.2 [44044271] + RDKitMinimalLib v1.2.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [69024149] + StringEncodings v0.3.7 [3bb67fe8] + TranscodingStreams v0.11.3 [1986cc42] + Unitful v1.25.1 [cbff2730] + Unmarshal v0.4.4 [ddb6d928] + YAML v0.4.15 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [2e619515] + Expat_jll v2.7.3+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [7746bdde] + Glib_jll v2.86.0+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [36c8627f] + Pango_jll v1.56.4+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [03d1d220] + RDKit_jll v2022.9.5+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 ⌅ [28df3c45] + boost_jll v1.76.0+1 [f6050b86] + coordgenlibs_jll v3.0.2+0 [172afb32] + libinchi_jll v1.6.0+0 [b53b4c65] + libpng_jll v1.6.50+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 8.24s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 6714.7 ms ✓ ColorTypes 2122.6 ms ✓ TranscodingStreams 4068.3 ms ✓ DataStructures 1862.0 ms ✓ boost_jll 5051.9 ms ✓ ArnoldiMethod 4125.5 ms ✓ JSON 2672.4 ms ✓ HarfBuzz_jll 7303.3 ms ✓ Colors 43066.0 ms ✓ JLD2 1385.5 ms ✓ RDKit_jll 9694.7 ms ✓ Graphs 4117.9 ms ✓ LazyJSON 1526.7 ms ✓ Pango_jll 1290.7 ms ✓ Graphics 6162.9 ms ✓ Compose 1115.4 ms ✓ RDKitMinimalLib 8679.1 ms ✓ MetaGraphs WARNING: method definition for unmarshal at /home/pkgeval/.julia/packages/Unmarshal/2eEFB/src/Unmarshal.jl:67 declares type variable N but does not use it. 1276.6 ms ✓ Unmarshal 2404.3 ms ✓ Cairo 4656.4 ms ✓ GraphPlot 14183.2 ms ✓ MolecularGraph WARNING: Constructor for type "MetaGraph" was extended in `MolecularGraphKernels` without explicit qualification or import.  NOTE: Assumed "MetaGraph" refers to `MetaGraphs.MetaGraph`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function MetaGraph end`.  Hint: To silence the warning, qualify `MetaGraph` as `MetaGraphs.MetaGraph` in the method signature or explicitly `import MetaGraphs: MetaGraph`. WARNING: Constructor for type "SimpleGraph" was extended in `MolecularGraphKernels` without explicit qualification or import.  NOTE: Assumed "SimpleGraph" refers to `Graphs.SimpleGraph`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function SimpleGraph end`.  Hint: To silence the warning, qualify `SimpleGraph` as `Graphs.SimpleGraph` in the method signature or explicitly `import Graphs: SimpleGraph`. 18500.1 ms ✓ MolecularGraphKernels 22 dependencies successfully precompiled in 152 seconds. 97 already precompiled. 2 dependencies had output during precompilation: ┌ MolecularGraphKernels │ WARNING: Constructor for type "MetaGraph" was extended in `MolecularGraphKernels` without explicit qualification or import. │ NOTE: Assumed "MetaGraph" refers to `MetaGraphs.MetaGraph`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MetaGraph end`. │ Hint: To silence the warning, qualify `MetaGraph` as `MetaGraphs.MetaGraph` in the method signature or explicitly `import MetaGraphs: MetaGraph`. │ WARNING: Constructor for type "SimpleGraph" was extended in `MolecularGraphKernels` without explicit qualification or import. │ NOTE: Assumed "SimpleGraph" refers to `Graphs.SimpleGraph`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SimpleGraph end`. │ Hint: To silence the warning, qualify `SimpleGraph` as `Graphs.SimpleGraph` in the method signature or explicitly `import Graphs: SimpleGraph`. └ ┌ Unmarshal │ WARNING: method definition for unmarshal at /home/pkgeval/.julia/packages/Unmarshal/2eEFB/src/Unmarshal.jl:67 declares type variable N but does not use it. └ Precompilation completed after 152.64s ################################################################################ # Loading # Loading MolecularGraphKernels... Loading completed after 13.38s PkgEval succeeded after 195.28s