Package evaluation to load ChemometricsData on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T10:29:01.116 ################################################################################ # Set-up # Set-up completed after 0.1s ################################################################################ # Installation # Installing ChemometricsData... Resolving package versions... Installed Lz4_jll ───────────────────── v1.10.1+0 Installed libaec_jll ────────────────── v1.1.4+0 Installed InlineStrings ─────────────── v1.4.5 Installed URIs ──────────────────────── v1.6.1 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed FilePathsBase ─────────────── v0.9.24 Installed DataDeps ──────────────────── v0.7.13 Installed DataStructures ────────────── v0.18.22 Installed CodecZlib ─────────────────── v0.7.8 Installed ExceptionUnwrapping ───────── v0.1.11 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed ConcurrentUtilities ───────── v2.5.0 Installed OrderedCollections ────────── v1.8.1 Installed Compat ────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed TranscodingStreams ────────── v0.11.3 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.3 Installed Blosc ─────────────────────── v0.7.3 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed DataValueInterfaces ───────── v1.0.0 Installed InvertedIndices ───────────── v1.3.1 Installed MbedTLS ───────────────────── v1.1.9 Installed StatsAPI ──────────────────── v1.7.1 Installed SentinelArrays ────────────── v1.4.8 Installed OpenSSL ───────────────────── v1.6.0 Installed LoggingExtras ─────────────── v1.2.0 Installed Blosc_jll ─────────────────── v1.21.7+0 Installed Distances ─────────────────── v0.10.12 Installed JSON3 ─────────────────────── v1.14.3 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed StringManipulation ────────── v0.4.1 Installed HTTP ──────────────────────── v1.10.19 Installed BitFlags ──────────────────── v0.1.9 Installed MD5 ───────────────────────── v0.2.3 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed PrettyTables ──────────────── v3.1.0 Installed BufferedStreams ───────────── v1.2.2 Installed Parsers ───────────────────── v2.8.3 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed Tables ────────────────────── v1.12.1 Installed XML2_jll ──────────────────── v2.13.9+0 Installed Scratch ───────────────────── v1.3.0 Installed Reexport ──────────────────── v1.2.2 Installed CSV ───────────────────────── v0.10.15 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed SimpleBufferStream ────────── v1.2.0 Installed MPIPreferences ────────────── v0.1.11 Installed WeakRefStrings ────────────── v1.4.2 Installed HDF5 ──────────────────────── v0.13.6 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed DataFrames ────────────────── v1.8.1 Installed MbedTLS_jll ───────────────── v2.28.10+0 Installed Crayons ───────────────────── v4.1.1 Installed StructTypes ───────────────── v1.11.0 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed SortingAlgorithms ─────────── v1.2.2 Installed ProgressBars ──────────────── v0.7.1 Installed MAT ───────────────────────── v0.8.1 Installed WorkerUtilities ───────────── v1.6.1 Installed StringDistances ───────────── v0.9.1 Installed ChemometricsData ──────────── v0.1.4 Installing 10 artifacts Installed artifact libaec 49.6 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact Blosc 44.2 KiB Installed artifact Lz4 239.7 KiB Installed artifact Libiconv 1.9 MiB Installed artifact MbedTLS 2.2 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact XML2 2.5 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.14/Project.toml` [fc65c5b3] + ChemometricsData v0.1.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [d1d4a3ce] + BitFlags v0.1.9 [a74b3585] + Blosc v0.7.3 [e1450e63] + BufferedStreams v1.2.2 [336ed68f] + CSV v0.10.15 [fc65c5b3] + ChemometricsData v0.1.4 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 ⌅ [f67ccb44] + HDF5 v0.13.6 [cd3eb016] + HTTP v1.10.19 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [23992714] + MAT v0.8.1 [6ac74813] + MD5 v0.2.3 [3da0fdf6] + MPIPreferences v0.1.11 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [4d8831e6] + OpenSSL v1.6.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 ⌅ [49802e3a] + ProgressBars v0.7.1 [189a3867] + Reexport v1.2.2 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [88034a9c] + StringDistances v0.9.1 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [0b7ba130] + Blosc_jll v1.21.7+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.10+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0713cbabdf855852dfab3ce6447c87145f3d9ea8/build.log` Installation completed after 23.39s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 1826.3 ms ✓ InlineStrings 808.3 ms ✓ Reexport 1142.7 ms ✓ Statistics 888.2 ms ✓ DataAPI ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module MD5 in package MD5 because package MD5 does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have MD5 checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with MD5 Stacktrace:  [1] macro expansion  @ ./loading.jl:2488 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [4] require  @ ./loading.jl:2444 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/MD5/MwEAX/src/MD5.jl:4  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [15] include_string  @ ./loading.jl:3004 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/MD5/MwEAX/src/MD5.jl:1 in expression starting at stdin:5 Precompilation completed after 18.97s ################################################################################ # Loading # Loading ChemometricsData... ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module MD5 in package MD5 because package MD5 does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have MD5 checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with MD5 Stacktrace:  [1] macro expansion  @ ./loading.jl:2488 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [4] require  @ ./loading.jl:2444 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/MD5/MwEAX/src/MD5.jl:4  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [15] include_string  @ ./loading.jl:3004 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/MD5/MwEAX/src/MD5.jl:1 in expression starting at stdin:5 ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module MD5 in package MD5 because package MD5 does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have MD5 checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with MD5 Stacktrace:  [1] macro expansion  @ ./loading.jl:2488 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [4] require  @ ./loading.jl:2444 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/MD5/MwEAX/src/MD5.jl:4  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [15] include_string  @ ./loading.jl:3004 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/MD5/MwEAX/src/MD5.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ MD5 │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: MD5 Failed to precompile MD5 [6ac74813-4b46-53a4-afec-0b5dc9d7885c] to "/home/pkgeval/.julia/compiled/v1.14/MD5/jl_WiYae4" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/ChemometricsData/FU8VI/src/ChemometricsData.jl:1 Loading failed after 9.07s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using ChemometricsData'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 68.59s: package fails to precompile