Package evaluation to load Catlab on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T09:20:39.182 ################################################################################ # Set-up # Set-up completed after 0.15s ################################################################################ # Installation # Installing Catlab... Resolving package versions... Installed AlgebraicInterfaces ───────── v0.1.4 Installed LightXML ──────────────────── v0.9.3 Installed MacroTools ────────────────── v0.5.16 Installed NameResolution ────────────── v0.1.5 Installed CompTime ──────────────────── v0.1.2 Installed JuliaVariables ────────────── v0.2.4 Installed DataStructures ────────────── v0.18.22 Installed GATlab ────────────────────── v0.2.1 Installed DataAPI ───────────────────── v1.16.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Combinatorics ─────────────── v1.0.3 Installed Statistics ────────────────── v1.11.1 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed Measures ──────────────────── v0.3.3 Installed PrettyPrint ───────────────── v0.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed PEG ───────────────────────── v1.0.4 Installed Colors ────────────────────── v0.13.1 Installed StaticArrays ──────────────── v1.9.15 Installed Requires ──────────────────── v1.3.1 Installed StringManipulation ────────── v0.4.1 Installed ColorTypes ────────────────── v0.12.1 Installed JSON3 ─────────────────────── v1.14.3 ┌ Warning: tarball content of url https://api.github.com/repos/AlgebraicJulia/ACSets.jl/tarball/80ca69d6844aa5a1e67338b5362e393007c4c168 does not match git-tree-sha1, expected 80ca69d6844aa5a1e67338b5362e393007c4c168, got UInt8[0xd1, 0x1b, 0xa5, 0x13, 0x1c, 0x10, 0xde, 0x7a, 0x07, 0x55, 0x00, 0x30, 0xe6, 0x80, 0xaf, 0xa0, 0x1e, 0x32, 0xbf, 0xfb] └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1060 Installed JSON ──────────────────────── v0.21.4 Installed Parsers ───────────────────── v2.8.3 Installed GeneralizedGenerated ──────── v0.3.3 Installed XML2_jll ──────────────────── v2.15.1+0 Installed StructEquality ────────────── v2.1.0 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed PrettyTables ──────────────── v2.4.0 Installed FixedPointNumbers ─────────── v0.8.5 Installed Preferences ───────────────── v1.5.0 Installed JLLWrappers ───────────────── v1.7.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed StructTypes ───────────────── v1.11.0 Installed IterTools ─────────────────── v1.10.0 Installed MLStyle ───────────────────── v0.4.17 Installed Permutations ──────────────── v0.4.23 Installed Compose ───────────────────── v0.9.6 Installed Catlab ────────────────────── v0.17.2 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ────────────────────── v0.2.26 Installing 2 artifacts Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [134e5e36] + Catlab v0.17.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [227ef7b5] + ACSets v0.2.26 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [134e5e36] + Catlab v0.17.2 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.0.3 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.18.1 [a81c6b42] + Compose v0.9.6 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [53c48c17] + FixedPointNumbers v0.8.5 [f0ffcf3b] + GATlab v0.2.1 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [9c8b4983] + LightXML v0.9.3 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.3 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.15.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.42s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 4398.0 ms ✓ MacroTools 1087.2 ms ✓ Reexport 1477.1 ms ✓ Statistics 1339.5 ms ✓ DataAPI 1073.1 ms ✓ Measures 876.0 ms ✓ PrettyPrint 777.8 ms ✓ DataValueInterfaces 976.1 ms ✓ StaticArraysCore 1153.8 ms ✓ Requires 1271.7 ms ✓ OrderedCollections 25321.1 ms ✓ MLStyle 733.7 ms ✓ AlgebraicInterfaces 852.5 ms ✓ PEG 1117.9 ms ✓ IterTools 2012.9 ms ✓ Combinatorics 706.5 ms ✓ IteratorInterfaceExtensions 802.4 ms ✓ LaTeXStrings 1816.6 ms ✓ Crayons 1554.1 ms ✓ StructTypes 1131.0 ms ✓ Compat 1099.8 ms ✓ Preferences 3884.4 ms ✓ FixedPointNumbers 1299.0 ms ✓ Statistics → SparseArraysExt 803.3 ms ✓ NameResolution 10324.8 ms ✓ CompTime 1083.2 ms ✓ Permutations 740.3 ms ✓ TableTraits 807.2 ms ✓ Compat → CompatLinearAlgebraExt 1180.4 ms ✓ JLLWrappers 895.9 ms ✓ PrecompileTools 2720.8 ms ✓ ColorTypes 11219.9 ms ✓ JuliaVariables 2209.7 ms ✓ Tables 1242.3 ms ✓ StructEquality 3819.5 ms ✓ DataStructures 1415.0 ms ✓ Libiconv_jll 13488.5 ms ✓ StaticArrays 3063.4 ms ✓ StringManipulation 16516.8 ms ✓ Parsers 1201.4 ms ✓ ColorTypes → StyledStringsExt 7719.0 ms ✓ Colors 11740.7 ms ✓ GeneralizedGenerated 1442.2 ms ✓ XML2_jll 1367.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 26600.5 ms ✓ PrettyTables 13314.6 ms ✓ JSON3 3731.0 ms ✓ JSON 807.0 ms ✓ LightXML 27918.7 ms ✓ ACSets 6880.0 ms ✓ Compose 67962.5 ms ✓ GATlab julia: /source/src/module.c:109: update_implicit_resolution: Assertion `resolution.binding_or_const' failed.  [277] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/gfcLO/src/Catlab.jl:25 unknown function (ip: 0x76114e977ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x76114e913394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:109 [inlined] jl_resolve_implicit_import at /source/src/module.c:339 jl_resolve_implicit_import at /source/src/module.c:1762 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1763 ijl_module_using at /source/src/module.c:1442 jl_f__using at /source/src/builtins.c:1590 _eval_using at ./module.jl:138 [inlined] _eval_using at ./module.jl:137 jfptr__eval_using_56536.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:650 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2994 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3054 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3148 jfptr_include_package_for_output_65705.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2994 include_string at ./loading.jl:3004 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:577 jfptr__start_74988.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x76114e914249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 86779282 (Pool: 86778034; Big: 1248); GC: 25 Precompilation completed after 435.09s ################################################################################ # Loading # Loading Catlab... julia: /source/src/module.c:109: update_implicit_resolution: Assertion `resolution.binding_or_const' failed.  [285] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/gfcLO/src/Catlab.jl:25 unknown function (ip: 0x7776e8ea7ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7776e8e43394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:109 [inlined] jl_resolve_implicit_import at /source/src/module.c:339 jl_resolve_implicit_import at /source/src/module.c:1762 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1763 ijl_module_using at /source/src/module.c:1442 jl_f__using at /source/src/builtins.c:1590 _eval_using at ./module.jl:138 [inlined] _eval_using at ./module.jl:137 jfptr__eval_using_56536.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:650 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2994 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3054 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3148 jfptr_include_package_for_output_65705.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2994 include_string at ./loading.jl:3004 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:577 jfptr__start_74988.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7776e8e44249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 86880463 (Pool: 86879216; Big: 1247); GC: 27 1 dependency had output during precompilation: ┌ Catlab │ [Output was shown above] └ ERROR: The following 1 package failed to precompile: Catlab Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.14/Catlab/jl_MKg22M" (ProcessSignaled(6)). Loading failed after 86.53s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using Catlab'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 555.98s: package fails to precompile