Package evaluation to load BayesianTomography on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T08:42:19.219


################################################################################
# Set-up
#


Set-up completed after 0.11s


################################################################################
# Installation
#

Installing BayesianTomography...
   Resolving package versions...
   Installed Rmath_jll ─────────────── v0.5.1+0
   Installed HypergeometricFunctions ─ v0.3.28
   Installed OnlineStatsBase ───────── v1.7.1
   Installed AbstractTrees ─────────── v0.4.5
   Installed AliasTables ───────────── v1.1.3
   Installed FillArrays ────────────── v1.14.0
   Installed DataStructures ────────── v0.19.3
   Installed StatsBase ─────────────── v0.34.7
   Installed RecipesBase ───────────── v1.3.4
   Installed StatsAPI ──────────────── v1.7.1
   Installed DataAPI ───────────────── v1.16.0
   Installed OrderedCollections ────── v1.8.1
   Installed IrrationalConstants ───── v0.2.6
   Installed Statistics ────────────── v1.11.1
   Installed QuadGK ────────────────── v2.11.2
   Installed PrecompileTools ───────── v1.3.3
   Installed OpenSpecFun_jll ───────── v0.5.6+0
   Installed NaNMath ───────────────── v1.1.3
   Installed DiffRules ─────────────── v1.15.1
   Installed Requires ──────────────── v1.3.1
   Installed LogExpFunctions ───────── v0.3.29
   Installed Tullio ────────────────── v0.3.8
   Installed Rmath ─────────────────── v0.9.0
   Installed PtrArrays ─────────────── v1.3.0
   Installed Reexport ──────────────── v1.2.2
   Installed StatsFuns ─────────────── v1.5.2
   Installed SpecialFunctions ──────── v2.6.1
   Installed Preferences ───────────── v1.5.0
   Installed Distributions ─────────── v0.25.122
   Installed Missings ──────────────── v1.2.0
   Installed JLLWrappers ───────────── v1.7.1
   Installed DocStringExtensions ───── v0.9.5
   Installed SortingAlgorithms ─────── v1.2.2
   Installed PDMats ────────────────── v0.11.36
   Installed OnlineStats ───────────── v1.7.2
   Installed BayesianTomography ────── v0.1.3
  Installing 2 artifacts
   Installed artifact Rmath       121.9 KiB
   Installed artifact OpenSpecFun 194.9 KiB
    Updating `~/.julia/environments/v1.14/Project.toml`
  [ae1f9aa5] + BayesianTomography v0.1.3
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
  [ae1f9aa5] + BayesianTomography v0.1.3
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.3
  [b552c78f] + DiffRules v1.15.1
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [1a297f60] + FillArrays v1.14.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.7.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.3
  [a15396b6] + OnlineStats v1.7.2
  [925886fa] + OnlineStatsBase v1.7.1
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.36
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.7
  [4c63d2b9] + StatsFuns v1.5.2
  [bc48ee85] + Tullio v0.3.8
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 10.56s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
    766.6 ms  ✓ Reexport
   1061.9 ms  ✓ Statistics
    839.5 ms  ✓ DataAPI
   2034.1 ms  ✓ IrrationalConstants
    848.2 ms  ✓ StatsAPI
   1142.9 ms  ✓ Requires
   1218.5 ms  ✓ OrderedCollections
   1121.4 ms  ✓ DocStringExtensions
   1110.2 ms  ✓ AbstractTrees
   2106.5 ms  ✓ FillArrays
    815.8 ms  ✓ PtrArrays
   1225.2 ms  ✓ SuiteSparse
    985.9 ms  ✓ NaNMath
   1105.5 ms  ✓ Preferences
   1394.6 ms  ✓ Statistics → SparseArraysExt
    951.9 ms  ✓ Missings
   3423.8 ms  ✓ DataStructures
   1871.8 ms  ✓ LogExpFunctions
   1599.0 ms  ✓ FillArrays → FillArraysSparseArraysExt
   1264.6 ms  ✓ FillArrays → FillArraysStatisticsExt
    961.7 ms  ✓ AliasTables
   2000.0 ms  ✓ PDMats
   1319.3 ms  ✓ JLLWrappers
   1128.0 ms  ✓ PrecompileTools
   1140.7 ms  ✓ SortingAlgorithms
   2465.4 ms  ✓ QuadGK
   1319.7 ms  ✓ FillArrays → FillArraysPDMatsExt
   1318.5 ms  ✓ Rmath_jll
   1426.2 ms  ✓ OpenSpecFun_jll
   2729.7 ms  ✓ RecipesBase
   4124.2 ms  ✓ StatsBase
   1461.6 ms  ✓ Rmath
   5259.7 ms  ✓ SpecialFunctions
   2594.3 ms  ✓ OnlineStatsBase
   1388.9 ms  ✓ PDMats → StatsBaseExt
   2526.7 ms  ✓ HypergeometricFunctions
   1471.8 ms  ✓ DiffRules
   2879.2 ms  ✓ StatsFuns
ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] getproperty
    @ ./Base_compiler.jl:50 [inlined]
  [2] _precompile_()
    @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77
  [3] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14
  [4] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [5] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3148
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2994
 [11] include_string
    @ ./loading.jl:3004 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [13] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1
in expression starting at stdin:5

Precompilation completed after 81.28s


################################################################################
# Loading
#

Loading BayesianTomography...
ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] getproperty
    @ ./Base_compiler.jl:50 [inlined]
  [2] _precompile_()
    @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77
  [3] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14
  [4] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [5] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3148
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2994
 [11] include_string
    @ ./loading.jl:3004 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [13] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1
in expression starting at stdin:5
WARNING: Constructor for type "Extrema" was extended in `OnlineStats` without explicit qualification or import.
  NOTE: Assumed "Extrema" refers to `OnlineStatsBase.Extrema`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Extrema end`.
  Hint: To silence the warning, qualify `Extrema` as `OnlineStatsBase.Extrema` in the method signature or explicitly `import OnlineStatsBase: Extrema`.

  1 dependency had output during precompilation:
┌ OnlineStats
│  [Output was shown above]
└  
ERROR: LoadError: UndefVarError: `_shrink` not defined in `Base`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] getproperty
    @ ./Base_compiler.jl:50 [inlined]
  [2] _precompile_()
    @ Tullio._Precompile_Base ~/.julia/packages/Tullio/2zyFP/src/precompile/precompile_Base.jl:77
  [3] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/precompile.jl:14
  [4] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [5] top-level scope
    @ ~/.julia/packages/Tullio/2zyFP/src/Tullio.jl:27
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3148
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2994
 [11] include_string
    @ ./loading.jl:3004 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [13] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Tullio/2zyFP/src/Tullio.jl:1
in expression starting at stdin:5

  1 dependency had output during precompilation:
┌ Tullio
│  [Output was shown above]
└  
ERROR: LoadError: The following 1 package failed to precompile:

Tullio 
Failed to precompile Tullio [bc48ee85-29a4-5162-ae0b-a64e1601d4bc] to "/home/pkgeval/.julia/compiled/v1.14/Tullio/jl_5mONwP" (ProcessExited(1)).

in expression starting at /home/pkgeval/.julia/packages/BayesianTomography/ilGPC/src/BayesianTomography.jl:1

Loading failed after 36.15s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using BayesianTomography'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 212.51s: package fails to precompile