Package evaluation to load ADCMEKit on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T10:25:55.407 ################################################################################ # Set-up # Set-up completed after 0.1s ################################################################################ # Installation # Installing ADCMEKit... Resolving package versions... Installed Lz4_jll ─────────────── v1.10.1+0 Installed VersionParsing ──────── v1.3.0 Installed MKL_jll ─────────────── v2025.2.0+0 Installed libaec_jll ──────────── v1.1.4+0 Installed MacroTools ──────────── v0.5.16 Installed oneTBB_jll ──────────── v2022.0.0+1 Installed MPICH_jll ───────────── v4.3.2+0 Installed CodecZlib ───────────── v0.7.8 Installed Blosc ───────────────── v0.7.3 Installed Xorg_libpciaccess_jll ─ v0.18.1+0 Installed IntelOpenMP_jll ─────── v2025.2.0+0 Installed MicrosoftMPI_jll ────── v10.1.4+3 Installed Statistics ──────────── v1.11.1 Installed TranscodingStreams ──── v0.11.3 Installed PrecompileTools ─────── v1.3.3 Installed Colors ──────────────── v0.13.1 Installed Conda ───────────────── v1.10.3 Installed Blosc_jll ───────────── v1.21.7+0 Installed ColorTypes ──────────── v0.12.1 Installed StructUtils ─────────── v2.5.1 Installed AbstractFFTs ────────── v1.5.0 Installed OpenSpecFun_jll ─────── v0.5.6+0 Installed PyCall ──────────────── v1.96.4 Installed PyPlot ──────────────── v2.11.6 Installed HDF5_jll ────────────── v1.14.6+0 Installed OpenMPI_jll ─────────── v5.0.8+0 Installed CMake ───────────────── v1.2.0 Installed Parsers ─────────────── v2.8.3 Installed BufferedStreams ─────── v1.2.2 Installed JSON ────────────────── v1.2.0 Installed Hwloc_jll ───────────── v2.12.2+0 Installed URIParser ───────────── v0.4.1 Installed XML2_jll ────────────── v2.13.9+0 Installed Reexport ────────────── v1.2.2 Installed FixedPointNumbers ───── v0.8.5 Installed Preferences ─────────── v1.5.0 Installed SpecialFunctions ────── v0.10.3 Installed HDF5 ────────────────── v0.13.6 Installed MPIPreferences ──────── v0.1.11 Installed FFTW ────────────────── v1.10.0 Installed FFTW_jll ────────────── v3.3.11+0 Installed JLLWrappers ─────────── v1.7.1 Installed Libiconv_jll ────────── v1.18.0+0 Installed BinDeps ─────────────── v1.0.2 Installed LaTeXStrings ────────── v1.4.0 Installed MPItrampoline_jll ───── v5.5.4+0 Installed ADCMEKit ────────────── v0.2.3 Installed MAT ─────────────────── v0.8.1 Installed ADCME ───────────────── v0.5.13 Installing 11 artifacts Installed artifact Blosc 44.2 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Lz4 239.7 KiB Installed artifact FFTW 2.2 MiB Installed artifact Hwloc 3.5 MiB Installed artifact XML2 2.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.14/Project.toml` [b6719975] + ADCMEKit v0.2.3 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [07b341a0] + ADCME v0.5.13 [b6719975] + ADCMEKit v0.2.3 [621f4979] + AbstractFFTs v1.5.0 [9e28174c] + BinDeps v1.0.2 [a74b3585] + Blosc v0.7.3 [e1450e63] + BufferedStreams v1.2.2 [631607c0] + CMake v1.2.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [8f4d0f93] + Conda v1.10.3 [7a1cc6ca] + FFTW v1.10.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f67ccb44] + HDF5 v0.13.6 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.0 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [23992714] + MAT v0.8.1 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [438e738f] + PyCall v1.96.4 [d330b81b] + PyPlot v2.11.6 [189a3867] + Reexport v1.2.2 ⌅ [276daf66] + SpecialFunctions v0.10.3 [10745b16] + Statistics v1.11.1 [ec057cc2] + StructUtils v2.5.1 [3bb67fe8] + TranscodingStreams v0.11.3 [30578b45] + URIParser v0.4.1 [81def892] + VersionParsing v1.3.0 [0b7ba130] + Blosc_jll v1.21.7+0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building HDF5 ────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0713cbabdf855852dfab3ce6447c87145f3d9ea8/build.log` Building CMake ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/50a8b41d2c562fccd9ab841085fc7d1e2706da82/build.log` Building ADCME ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/aec60a2a458732aa0bd3e518b3f5a0d741b4c9ad/build.log` Building ADCMEKit → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/e61342ce0edf8177479315b8a861c6927593c647/build.log` Installation completed after 1479.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 4217.0 ms ✓ MacroTools 723.2 ms ✓ Reexport 1053.1 ms ✓ Statistics 838.9 ms ✓ VersionParsing 969.6 ms ✓ AbstractFFTs 1045.4 ms ✓ BufferedStreams 1319.1 ms ✓ TranscodingStreams 760.1 ms ✓ LaTeXStrings 1052.1 ms ✓ URIParser 1364.7 ms ✓ StructUtils 1068.2 ms ✓ Preferences 3757.2 ms ✓ FixedPointNumbers 1508.8 ms ✓ Statistics → SparseArraysExt 3553.6 ms ✓ AbstractFFTs → AbstractFFTsTestExt 915.5 ms ✓ CodecZlib 5492.7 ms ✓ BinDeps 1242.0 ms ✓ JLLWrappers 1454.3 ms ✓ MPIPreferences 842.8 ms ✓ PrecompileTools 2664.3 ms ✓ ColorTypes 739.9 ms ✓ CMake 1394.0 ms ✓ libaec_jll 4976.7 ms ✓ IntelOpenMP_jll 1384.8 ms ✓ Xorg_libpciaccess_jll 1380.4 ms ✓ Libiconv_jll 1398.2 ms ✓ Lz4_jll 5095.7 ms ✓ oneTBB_jll 1519.6 ms ✓ FFTW_jll 1326.2 ms ✓ MicrosoftMPI_jll 1365.3 ms ✓ OpenSpecFun_jll 4941.8 ms ✓ MPItrampoline_jll 16012.5 ms ✓ Parsers 1247.2 ms ✓ ColorTypes → StyledStringsExt 7991.6 ms ✓ Colors 1404.0 ms ✓ XML2_jll 1413.8 ms ✓ Blosc_jll  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10251.1 ms ✓ MKL_jll 3657.5 ms ✓ SpecialFunctions 7206.0 ms ✓ JSON 1411.5 ms ✓ Hwloc_jll 1060.2 ms ✓ Blosc 6552.5 ms ✓ FFTW 2401.5 ms ✓ Conda 4979.2 ms ✓ MPICH_jll 4776.7 ms ✓ OpenMPI_jll 23034.4 ms ✓ PyCall 5870.7 ms ✓ HDF5_jll 9509.4 ms ✓ PyPlot WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import.  NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Array end`.  Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. 11100.1 ms ✓ HDF5 8193.0 ms ✓ MAT WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:411 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:565 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:639 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/JzSON/src/variable.jl:212. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 12655.6 ms ? ADCME ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("07b341a0-ce75-57c6-b2de-414ffdc00be5"), "ADCME") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2717  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2576  [4] macro expansion  @ ./loading.jl:2504 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [7] require  @ ./loading.jl:2444 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/ADCMEKit/Iikxe/src/ADCMEKit.jl:7  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [18] include_string  @ ./loading.jl:3004 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/ADCMEKit/Iikxe/src/ADCMEKit.jl:1 in expression starting at stdin:5 3 dependencies had output during precompilation: ┌ ADCME │ WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:411 declares type variable T but does not use it. │ WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:565 declares type variable T but does not use it. │ WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:639 declares type variable T but does not use it. │ WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/JzSON/src/variable.jl:212. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ HDF5 │ WARNING: Constructor for type "Array" was extended in `HDF5` without explicit qualification or import. │ NOTE: Assumed "Array" refers to `Base.Array`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Array end`. │ Hint: To silence the warning, qualify `Array` as `Base.Array` in the method signature or explicitly `import Base: Array`. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 218.24s ################################################################################ # Loading # Loading ADCMEKit... WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:411 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:565 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:639 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/JzSON/src/variable.jl:212. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("07b341a0-ce75-57c6-b2de-414ffdc00be5"), "ADCME") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2717  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2576  [4] macro expansion  @ ./loading.jl:2504 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [7] require  @ ./loading.jl:2444 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/ADCMEKit/Iikxe/src/ADCMEKit.jl:7  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [18] include_string  @ ./loading.jl:3004 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/ADCMEKit/Iikxe/src/ADCMEKit.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ ADCME │ WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:411 declares type variable T but does not use it. │ WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:565 declares type variable T but does not use it. │ WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/JzSON/src/optim.jl:639 declares type variable T but does not use it. │ WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/JzSON/src/variable.jl:212. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ ADCMEKit │ [Output was shown above] └ ERROR: The following 1 package failed to precompile: ADCMEKit Failed to precompile ADCMEKit [b6719975-6fcd-4453-92fa-4206f52c3839] to "/home/pkgeval/.julia/compiled/v1.14/ADCMEKit/jl_7AfZQv" (ProcessExited(1)). Loading failed after 23.84s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using ADCMEKit'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1822.11s: illegal method overwrites during precompilation