Package evaluation to load AAindex on Julia 1.14.0-DEV.29 (7d6ae45e5a*) started at 2025-11-05T09:32:41.099


################################################################################
# Set-up
#


Set-up completed after 0.12s


################################################################################
# Installation
#

Installing AAindex...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [1cd36ffe] + AAindex v0.3.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1cd36ffe] + AAindex v0.3.0
  [7e6ae17a] + BioSequences v3.5.0
  [3c28c6f8] + BioSymbols v5.2.0
  [d1d4a3ce] + BitFlags v0.1.9
  [336ed68f] + CSV v0.10.15
  [944b1d66] + CodecZlib v0.7.8
  [34da2185] + Compat v4.18.1
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [124859b0] + DataDeps v0.7.13
  [a93c6f00] + DataFrames v1.8.1
  [864edb3b] + DataStructures v0.19.3
  [e2d170a0] + DataValueInterfaces v1.0.0
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [48062228] + FilePathsBase v0.9.24
  [cd3eb016] + HTTP v1.10.19
  [842dd82b] + InlineStrings v1.4.5
  [41ab1584] + InvertedIndices v1.3.1
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [b964fa9f] + LaTeXStrings v1.4.0
  [e6f89c97] + LoggingExtras v1.2.0
  [739be429] + MbedTLS v1.1.9
  [e1d29d7a] + Missings v1.2.0
  [4d8831e6] + OpenSSL v1.6.0
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [08abe8d2] + PrettyTables v3.1.0
  [189a3867] + Reexport v1.2.2
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.8
  [777ac1f9] + SimpleBufferStream v1.2.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [3bb67fe8] + TranscodingStreams v0.11.3
  [7200193e] + Twiddle v1.1.2
  [5c2747f8] + URIs v1.6.1
  [ea10d353] + WeakRefStrings v1.4.2
  [76eceee3] + WorkerUtilities v1.6.1
  [c8ffd9c3] + MbedTLS_jll v2.28.10+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [3f19e933] + p7zip_jll v17.6.0+0

Installation completed after 6.2s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
    933.9 ms  ✓ SortingAlgorithms
   3828.7 ms  ✓ DataDeps
  22748.4 ms  ✓ CSV
  72861.0 ms  ✓ DataFrames
  12341.3 ms  ✓ AAindex
  5 dependencies successfully precompiled in 119 seconds. 70 already precompiled.

Precompilation completed after 118.72s


################################################################################
# Loading
#

Loading AAindex...
ERROR: InitError: DataDeps.DisabledError("DataDeps download disabled, as we appear to be in a CI environment, and the environment variable `DATADEPS_ALWAYS_ACCEPT` is not set.\nIf this is indeed running in a headless CI environment, then set the `DATADEPS_ALWAYS_ACCEPT` environment variable to `true` to bypass the accept download prompt (if you do wish to always accept.)\nIf not, then either unset the `CI` environment variable from true, or set `DATADEPS_ALWAYS_ACCEPT` to `false` for the normal prompt behaviour.")
Stacktrace:
  [1] ensure_download_permitted()
    @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:26
  [2] download(datadep::DataDeps.DataDep, localdir::String; remotepath::Vector{String}, i_accept_the_terms_of_use::Nothing, skip_checksum::Bool)
    @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:70
  [3] download(datadep::DataDeps.DataDep, localdir::String)
    @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:63
  [4] handle_missing
    @ ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:10 [inlined]
  [5] _resolve
    @ ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:83 [inlined]
  [6] resolve(datadep::DataDeps.DataDep, inner_filepath::String, calling_filepath::String)
    @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:29
  [7] resolve(datadep_name::String, inner_filepath::String, calling_filepath::String)
    @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:54
  [8] resolve
    @ ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:73 [inlined]
  [9] __init__()
    @ AAindex ~/.julia/packages/AAindex/rSkuG/src/init.jl:42
 [10] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1458
 [11] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1446
 [12] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1334
 [13] _include_from_serialized
    @ ./loading.jl:1291 [inlined]
 [14] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2166
 [15] _require_search_from_serialized
    @ ./loading.jl:2060 [inlined]
 [16] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2710
 [17] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
 [18] macro expansion
    @ ./loading.jl:2504 [inlined]
 [19] macro expansion
    @ ./lock.jl:376 [inlined]
 [20] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [21] require
    @ ./loading.jl:2444 [inlined]
 [22] eval_import_path
    @ ./module.jl:36 [inlined]
 [23] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [24] _eval_using
    @ ./module.jl:137 [inlined]
 [25] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [26] top-level scope
    @ none:1
 [27] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [28] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [29] _start()
    @ Base ./client.jl:577
during initialization of module AAindex

Loading failed after 36.6s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using AAindex'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 185.03s: there were unidentified errors