Package evaluation to load PhyloTools on Julia 1.14.0-DEV.2226 (797a5ef2b0*) started at 2026-05-23T22:45:51.796


################################################################################
# Set-up
#


Set-up completed after 0.13s


################################################################################
# Installation
#

Installing PhyloTools...
   Resolving package versions...
   Installed RecipesBase ─────── v1.3.4
   Installed Reexport ────────── v1.2.2
   Installed FixedPointNumbers ─ v0.8.5
   Installed AbstractTrees ───── v0.4.5
   Installed Statistics ──────── v1.11.1
   Installed Colors ──────────── v0.12.11
   Installed Preferences ─────── v1.5.2
   Installed PrecompileTools ─── v1.3.4
   Installed Observables ─────── v0.5.5
   Installed ColorTypes ──────── v0.11.5
   Installed MakieCore ───────── v0.5.2
   Installed PhyloTools ──────── v0.1.0
    Updating `~/.julia/environments/v1.14/Project.toml`
  [b795de74] + PhyloTools v0.1.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
⌅ [3da002f7] + ColorTypes v0.11.5
⌅ [5ae59095] + Colors v0.12.11
  [53c48c17] + FixedPointNumbers v0.8.5
⌅ [20f20a25] + MakieCore v0.5.2
  [510215fc] + Observables v0.5.5
  [b795de74] + PhyloTools v0.1.0
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [10745b16] + Statistics v1.11.1
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [fa267f1f] + TOML v1.0.3
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.1+0
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 8.62s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling project...
   0.5 s  ✓ Reexport
  77.4 s  ✓ AbstractTrees
   1.0 s  ✓ Statistics
   1.0 s  ✓ Observables
   2.1 s  ✓ Preferences
  39.2 s  ✓ FixedPointNumbers
┌ Info: JuliaLowering threw given input:
│   code =
│    :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =# @recipe Wireframe do scene
│          #= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:602 =#
│          Attributes(; default_theme(scene, LineSegments)..., depth_shift = -1.0f-5)
│      end)
│   st0 =
│    SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source,__macro_ctx__
│    [do]                                                         │ 
│      [macrocall]                                                │ 
│        @recipe                              :: Identifier       │ 
│        :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =#) :: Value │ 
│        Wireframe                            :: Identifier       │ 
│      [->]                                                       │ 
│        [tuple]                                                  │ 
│          scene                              :: Identifier       │ 
│        [block]                                                  │ 
│          [call]                                                 │ 
│            Attributes                       :: Identifier       │ 
│            [parameters]                                         │ 
│              [...]                                              │ 
│                [call]                                           │ 
│                  default_theme              :: Identifier       │ 
│                  scene                      :: Identifier       │ 
│                  LineSegments               :: Identifier       │ 
│              [kw]                                               │ 
│                depth_shift                  :: Identifier       │ 
│                -1.0f-5                      :: Value            │ 
│    
│   st1 = nothing
│   file = "/home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl"
│   line = 600
└   mod = MakieCore
ERROR: LoadError: MethodError: no method matching iterate(::Nothing)
The function `iterate` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  iterate(!Matched::Compiler.AbsIntCycle, !Matched::Int64)
   @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1088
  iterate(!Matched::Compiler.AbsIntCycle)
   @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1087
  iterate(!Matched::Compiler.BitSetBoundedMinPrioritySet, Any...)
   @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:68
  ...

Stacktrace:
  [1] isempty(itr::Nothing)
    @ Base ./essentials.jl:1197
  [2] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:345
  [3] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
  [4] #expand_forms_1##2
    @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
  [5] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
    @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
  [6] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
  [7] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
  [8] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
  [9] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:327
 [10] top-level scope
    @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
 [11] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [13] top-level scope
    @ stdin:5
 [14] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [16] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [17] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [18] _start()
    @ Base ./client.jl:596
in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600
in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:1
in expression starting at stdin:5

caused by: MethodError: no method matching var"@recipe"(::LineNumberNode, ::Module, ::Symbol)
The function `@recipe` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  var"@recipe"(::LineNumberNode, ::Module, ::Any, !Matched::Symbol, !Matched::Symbol...)
   @ MakieCore ~/.julia/packages/MakieCore/77C6Z/src/recipes.jl:167

Stacktrace:
  [1] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:342
  [2] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
  [3] #expand_forms_1##2
    @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
  [4] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
    @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
  [5] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
  [6] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
  [7] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
  [8] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:327
  [9] top-level scope
    @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [11] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [12] top-level scope
    @ stdin:5
 [13] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [15] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [16] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [17] _start()
    @ Base ./client.jl:596
              ✗ MakieCore
   2.3 s  ✓ PrecompileTools
  42.3 s  ✓ ColorTypes
   4.2 s  ✓ RecipesBase
  83.4 s  ✓ Colors
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("20f20a25-4f0e-4fdf-b5d1-57303727442b"), "MakieCore") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2818
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2672
  [4] macro expansion
    @ ./loading.jl:2599 [inlined]
  [5] string(::String, ::Union{Char, SubString{String}, String, Symbol}, ::Symbol, ::String)
    @ Base ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2563
  [7] require
    @ ./loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:207
 [12] top-level scope
    @ ~/.julia/packages/PhyloTools/FfY4P/src/PhyloTools.jl:6
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [18] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [20] _start()
    @ Base ./client.jl:596
in expression starting at /home/pkgeval/.julia/packages/PhyloTools/FfY4P/src/PhyloTools.jl:1
in expression starting at stdin:5
              ✗ PhyloTools
  10 dependencies successfully precompiled in 316 seconds. 4 already precompiled.

Precompilation completed after 330.69s


################################################################################
# Loading
#

Loading PhyloTools...
┌ Info: JuliaLowering threw given input:
│   code =
│    :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =# @recipe Wireframe do scene
│          #= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:602 =#
│          Attributes(; default_theme(scene, LineSegments)..., depth_shift = -1.0f-5)
│      end)
│   st0 =
│    SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source,__macro_ctx__
│    [do]                                                         │ 
│      [macrocall]                                                │ 
│        @recipe                              :: Identifier       │ 
│        :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =#) :: Value │ 
│        Wireframe                            :: Identifier       │ 
│      [->]                                                       │ 
│        [tuple]                                                  │ 
│          scene                              :: Identifier       │ 
│        [block]                                                  │ 
│          [call]                                                 │ 
│            Attributes                       :: Identifier       │ 
│            [parameters]                                         │ 
│              [...]                                              │ 
│                [call]                                           │ 
│                  default_theme              :: Identifier       │ 
│                  scene                      :: Identifier       │ 
│                  LineSegments               :: Identifier       │ 
│              [kw]                                               │ 
│                depth_shift                  :: Identifier       │ 
│                -1.0f-5                      :: Value            │ 
│    
│   st1 = nothing
│   file = "/home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl"
│   line = 600
└   mod = MakieCore
ERROR: LoadError: MethodError: no method matching iterate(::Nothing)
The function `iterate` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  iterate(!Matched::MakieCore.Attributes, Any...)
   @ MakieCore ~/.julia/packages/MakieCore/77C6Z/src/attributes.jl:36
  iterate(!Matched::Compiler.AbsIntCycle, !Matched::Int64)
   @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1088
  iterate(!Matched::Compiler.AbsIntCycle)
   @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1087
  ...

Stacktrace:
  [1] isempty(itr::Nothing)
    @ Base ./essentials.jl:1197
  [2] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:345
  [3] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
  [4] #expand_forms_1##2
    @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
  [5] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
    @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
  [6] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
  [7] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
  [8] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
  [9] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:327
 [10] top-level scope
    @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
 [11] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [13] top-level scope
    @ stdin:5
 [14] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [16] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [17] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [18] _start()
    @ Base ./client.jl:596
in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600
in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:1
in expression starting at stdin:5

caused by: MethodError: no method matching var"@recipe"(::LineNumberNode, ::Module, ::Symbol)
The function `@recipe` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  var"@recipe"(::LineNumberNode, ::Module, ::Any, !Matched::Symbol, !Matched::Symbol...)
   @ MakieCore ~/.julia/packages/MakieCore/77C6Z/src/recipes.jl:167

Stacktrace:
  [1] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:342
  [2] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
  [3] #expand_forms_1##2
    @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
  [4] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
    @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
  [5] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
  [6] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
  [7] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
  [8] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:327
  [9] top-level scope
    @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [11] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [12] top-level scope
    @ stdin:5
 [13] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [15] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [16] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [17] _start()
    @ Base ./client.jl:596
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("20f20a25-4f0e-4fdf-b5d1-57303727442b"), "MakieCore") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:56
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2818
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2672
  [4] macro expansion
    @ ./loading.jl:2599 [inlined]
  [5] string(::String, ::Union{Char, SubString{String}, String, Symbol}, ::Symbol, ::String)
    @ Base ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2563
  [7] require
    @ ./loading.jl:2539 [inlined]
  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [10] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [11] eval_using(to::Module, path::Expr)
    @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:207
 [12] top-level scope
    @ ~/.julia/packages/PhyloTools/FfY4P/src/PhyloTools.jl:6
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [15] top-level scope
    @ stdin:5
 [16] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [18] push!(a::Vector{SubString{String}}, item::String)
    @ Base ./loading.jl:3123 [inlined]
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:353
 [20] _start()
    @ Base ./client.jl:596
in expression starting at /home/pkgeval/.julia/packages/PhyloTools/FfY4P/src/PhyloTools.jl:1
in expression starting at stdin:5
  2 dependencies had output during precompilation:
┌ PhyloTools
│  [Output was shown above]
└  
┌ MakieCore
│  ┌ Info: JuliaLowering threw given input:
│  │   code =
│  │    :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =# @recipe Wireframe do scene
│  │          #= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:602 =#
│  │          Attributes(; default_theme(scene, LineSegments)..., depth_shift = -1.0f-5)
│  │      end)
│  │   st0 =
│  │    SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source,__macro_ctx__
│  │    [do]                                                         │ 
│  │      [macrocall]                                                │ 
│  │        @recipe                              :: Identifier       │ 
│  │        :(#= /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600 =#) :: Value │ 
│  │        Wireframe                            :: Identifier       │ 
│  │      [->]                                                       │ 
│  │        [tuple]                                                  │ 
│  │          scene                              :: Identifier       │ 
│  │        [block]                                                  │ 
│  │          [call]                                                 │ 
│  │            Attributes                       :: Identifier       │ 
│  │            [parameters]                                         │ 
│  │              [...]                                              │ 
│  │                [call]                                           │ 
│  │                  default_theme              :: Identifier       │ 
│  │                  scene                      :: Identifier       │ 
│  │                  LineSegments               :: Identifier       │ 
│  │              [kw]                                               │ 
│  │                depth_shift                  :: Identifier       │ 
│  │                -1.0f-5                      :: Value            │ 
│  │    
│  │   st1 = nothing
│  │   file = "/home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl"
│  │   line = 600
│  └   mod = MakieCore
│  ERROR: LoadError: MethodError: no method matching iterate(::Nothing)
│  The function `iterate` exists, but no method is defined for this combination of argument types.
│  
│  Closest candidates are:
│    iterate(!Matched::MakieCore.Attributes, Any...)
│     @ MakieCore ~/.julia/packages/MakieCore/77C6Z/src/attributes.jl:36
│    iterate(!Matched::Compiler.AbsIntCycle, !Matched::Int64)
│     @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1088
│    iterate(!Matched::Compiler.AbsIntCycle)
│     @ Base /opt/julia/share/julia/Compiler/src/inferencestate.jl:1087
│    ...
│  
│  Stacktrace:
│    [1] isempty(itr::Nothing)
│      @ Base ./essentials.jl:1197
│    [2] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:345
│    [3] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
│    [4] #expand_forms_1##2
│      @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
│    [5] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
│      @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
│    [6] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
│    [7] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
│    [8] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
│    [9] include(mapexpr::Function, mod::Module, _path::String)
│      @ Base ./Base.jl:327
│   [10] top-level scope
│      @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
│   [11] include(mod::Module, _path::String)
│      @ Base ./Base.jl:326
│   [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3271
│   [13] top-level scope
│      @ stdin:5
│   [14] eval(m::Module, e::Any)
│      @ Core ./boot.jl:517
│   [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3113
│   [16] push!(a::Vector{SubString{String}}, item::String)
│      @ Base ./loading.jl:3123 [inlined]
│   [17] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:353
│   [18] _start()
│      @ Base ./client.jl:596
│  in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/basic_plots.jl:600
│  in expression starting at /home/pkgeval/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:1
│  in expression starting at stdin:5
│  
│  caused by: MethodError: no method matching var"@recipe"(::LineNumberNode, ::Module, ::Symbol)
│  The function `@recipe` exists, but no method is defined for this combination of argument types.
│  
│  Closest candidates are:
│    var"@recipe"(::LineNumberNode, ::Module, ::Any, !Matched::Symbol, !Matched::Symbol...)
│     @ MakieCore ~/.julia/packages/MakieCore/77C6Z/src/recipes.jl:167
│  
│  Stacktrace:
│    [1] expand_macro(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, outer_sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:342
│    [2] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:427
│    [3] #expand_forms_1##2
│      @ /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447 [inlined]
│    [4] mapchildren(f::Base.JuliaLowering.var"#expand_forms_1##2#expand_forms_1##3"{Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, Base.JuliaLowering.ScopeLayer}, ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})
│      @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707
│    [5] expand_forms_1(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, sl::Base.JuliaLowering.ScopeLayer)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:447
│    [6] expand_forms_1(mod::Module, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, expr_compat_mode::Bool, macro_world::UInt64)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/macro_expansion.jl:471
│    [7] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)
│      @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:29
│    [8] include(mapexpr::Function, mod::Module, _path::String)
│      @ Base ./Base.jl:327
│    [9] top-level scope
│      @ ~/.julia/packages/MakieCore/77C6Z/src/MakieCore.jl:16
│   [10] include(mod::Module, _path::String)
│      @ Base ./Base.jl:326
│   [11] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│      @ Base ./loading.jl:3271
│   [12] top-level scope
│      @ stdin:5
│   [13] eval(m::Module, e::Any)
│      @ Core ./boot.jl:517
│   [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│      @ Base ./loading.jl:3113
│   [15] push!(a::Vector{SubString{String}}, item::String)
│      @ Base ./loading.jl:3123 [inlined]
│   [16] exec_options(opts::Base.JLOptions)
│      @ Base ./client.jl:353
│   [17] _start()
│      @ Base ./client.jl:596
└  
ERROR: The following 2 packages failed to precompile:

PhyloTools 
Failed to precompile PhyloTools [b795de74-0e0b-491f-a34a-f5524d7c246d] to "/home/pkgeval/.julia/compiled/v1.14/PhyloTools/jl_DqUkfG" (ProcessExited(1)).

MakieCore 
Failed to precompile MakieCore [20f20a25-4f0e-4fdf-b5d1-57303727442b] to "/home/pkgeval/.julia/compiled/v1.14/MakieCore/jl_yQfUjt" (ProcessExited(1)).


Loading failed after 71.39s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --check-bounds=yes --pkgimages=existing -e 'using PhyloTools'`, ProcessExited(1)) [1]

Stacktrace:
 [1] spawn_opts_inherit()
   @ Base ./process.jl:612 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:525
 [3] run(::Cmd)
   @ Base ./process.jl:522
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:197
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:326
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:355
 [7] _start()
   @ Base ./client.jl:596
in expression starting at /PkgEval.jl/scripts/evaluate.jl:188

PkgEval failed after 433.0s: package fails to precompile