Package evaluation to test PeriodicGraphs on Julia 1.14.0-DEV.1352 (749bc618c5*) started at 2025-12-09T20:05:08.412 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.6s ################################################################################ # Installation # Installing PeriodicGraphs... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [18c5b727] + PeriodicGraphs v0.10.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [864edb3b] + DataStructures v0.19.3 [86223c79] + Graphs v1.13.2 [d25df0c9] + Inflate v0.1.5 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [18c5b727] + PeriodicGraphs v0.10.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 1.13s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 13.13s ################################################################################ # Testing # Testing PeriodicGraphs Status `/tmp/jl_FMbFfh/Project.toml` ⌅ [4c88cf16] Aqua v0.5.6 [861a8166] Combinatorics v1.0.3 [86223c79] Graphs v1.13.2 [18c5b727] PeriodicGraphs v0.10.4 [90137ffa] StaticArrays v1.9.15 [8dfed614] Test v1.11.0 Status `/tmp/jl_FMbFfh/Manifest.toml` ⌅ [4c88cf16] Aqua v0.5.6 [ec485272] ArnoldiMethod v0.4.0 [861a8166] Combinatorics v1.0.3 [34da2185] Compat v4.18.1 [864edb3b] DataStructures v0.19.3 [86223c79] Graphs v1.13.2 [d25df0c9] Inflate v0.1.5 [1914dd2f] MacroTools v0.5.16 [bac558e1] OrderedCollections v1.8.1 [18c5b727] PeriodicGraphs v0.10.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [699a6c99] SimpleTraits v0.9.5 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PeriodicGraphs [18c5b727-b240-4874-878a-f2e242435bab] │ exception = Required dependency Base.PkgId(Base.UUID("10745b16-79ce-11e8-11f9-7d13ad32a3b2"), "Statistics") failed to load from a cache file. └ @ Base loading.jl:2891 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for Graphs [86223c79-3864-5bf0-83f7-82e725a168b6] │ exception = Required dependency Base.PkgId(Base.UUID("10745b16-79ce-11e8-11f9-7d13ad32a3b2"), "Statistics") failed to load from a cache file. └ @ Base loading.jl:2891 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("8e59a23b-d1ef-5b43-a010-76e7ae578401"), "StaticArraysStatisticsExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2813  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2665  [4] _require_prelocked  @ ./loading.jl:2659 [inlined]  [5] run_extension_callbacks(extid::Base.ExtensionId)  @ Base ./loading.jl:1711  [6] run_extension_callbacks(pkgid::Base.PkgId)  @ Base ./loading.jl:1748  [7] run_package_callbacks(modkey::Base.PkgId)  @ Base ./loading.jl:1564  [8] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2673  [9] macro expansion  @ ./loading.jl:2593 [inlined]  [10] macro expansion  @ ./lock.jl:376 [inlined]  [11] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [12] require  @ ./loading.jl:2533 [inlined]  [13] eval_import_path  @ ./module.jl:36 [inlined]  [14] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [15] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [16] top-level scope  @ ~/.julia/packages/Graphs/lNprZ/src/Graphs.jl:7  [17] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3250  [19] top-level scope  @ stdin:5  [20] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3092  [22] include_string  @ ./loading.jl:3102 [inlined]  [23] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [24] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Graphs/lNprZ/src/Graphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("86223c79-3864-5bf0-83f7-82e725a168b6"), "Graphs") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2813  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2665  [4] macro expansion  @ ./loading.jl:2593 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2557  [7] require  @ ./loading.jl:2533 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/PeriodicGraphs/jkIeq/src/PeriodicGraphs.jl:5  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3250  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3092  [18] include_string  @ ./loading.jl:3102 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/PeriodicGraphs/jkIeq/src/PeriodicGraphs.jl:1 in expression starting at stdin:5 2 dependencies had output during precompilation: ┌ PeriodicGraphs │ [Output was shown above] └ ┌ Graphs │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("8e59a23b-d1ef-5b43-a010-76e7ae578401"), "StaticArraysStatisticsExt") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] __require_prelocked(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2813 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2665 │ [4] _require_prelocked │ @ ./loading.jl:2659 [inlined] │ [5] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1711 │ [6] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1748 │ [7] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1564 │ [8] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2673 │ [9] macro expansion │ @ ./loading.jl:2593 [inlined] │ [10] macro expansion │ @ ./lock.jl:376 [inlined] │ [11] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2557 │ [12] require │ @ ./loading.jl:2533 [inlined] │ [13] eval_import_path │ @ ./module.jl:36 [inlined] │ [14] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [15] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [16] top-level scope │ @ ~/.julia/packages/Graphs/lNprZ/src/Graphs.jl:7 │ [17] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3250 │ [19] top-level scope │ @ stdin:5 │ [20] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3092 │ [22] include_string │ @ ./loading.jl:3102 [inlined] │ [23] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [24] _start() │ @ Base ./client.jl:577 │ in expression starting at /home/pkgeval/.julia/packages/Graphs/lNprZ/src/Graphs.jl:1 │ in expression starting at stdin:5 └ ERROR: The following 2 packages failed to precompile: PeriodicGraphs Failed to precompile PeriodicGraphs [18c5b727-b240-4874-878a-f2e242435bab] to "/home/pkgeval/.julia/compiled/v1.14/PeriodicGraphs/jl_Diz2WU" (ProcessExited(1)). Graphs Failed to precompile Graphs [86223c79-3864-5bf0-83f7-82e725a168b6] to "/home/pkgeval/.julia/compiled/v1.14/Graphs/jl_g5yGEl" (ProcessExited(1)). Method ambiguity: Test Failed at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:117 Expression: success(pipeline(cmd; stdout = stdout, stderr = stderr)) Evaluated: success(pipeline(pipeline(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --pkgimages=existing -g1 --startup-file=no --startup-file=no -e 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/usr/local/share/julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia"]) append!(empty!(Base.DL_LOAD_PATH), String[]) append!(empty!(Base.LOAD_PATH), ["/tmp/jl_FMbFfh/Project.toml"]) ENV["JULIA_LOAD_PATH"] = "/tmp/jl_FMbFfh/Project.toml" Base.set_active_project(nothing) using Aqua Aqua.test_ambiguities_impl( [ Base.PkgId(Base.UUID(0x18c5b727b2404874878af2e242435bab), "PeriodicGraphs") Base.PkgId("Base") Base.PkgId("Core") ] , (recursive = true,), Aqua.ExcludeSpec[], ) || exit(1) '`, stdout>Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)), stderr>Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting))) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] [2] _test_ambiguities(packages::Vector{Base.PkgId}; color::Nothing, exclude::Vector{Any}, detect_ambiguities_options::@Kwargs{}) @ Aqua ~/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:117 [3] _test_ambiguities @ ~/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:90 [inlined] [4] test_ambiguities @ ~/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:27 [inlined] [5] macro expansion @ ~/.julia/packages/Aqua/bqhPD/src/Aqua.jl:96 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [7] test_all(testtarget::Module; ambiguities::Bool, unbound_args::Bool, undefined_exports::Bool, project_extras::Bool, stale_deps::Bool, deps_compat::Bool, project_toml_formatting::Bool) @ Aqua ~/.julia/packages/Aqua/bqhPD/src/Aqua.jl:90 Test Summary: | Fail Total Time Method ambiguity | 1 1 20.3s RNG of the outermost testset: Random.Xoshiro(0x7fcd29f14f4d0652, 0xfc7c7a47b3ab272d, 0x2720986fc1216be8, 0xc963236146e7244f, 0xba9b8aa02047958a) ERROR: LoadError: Some tests did not pass: 0 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PeriodicGraphs/jkIeq/test/runtests.jl:5 Testing failed after 168.47s ERROR: LoadError: Package PeriodicGraphs errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3053 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2902 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 208.59s: package fails to precompile