Package evaluation to test KmerAnalysis on Julia 1.14.0-DEV.1352 (749bc618c5*) started at 2025-12-09T19:59:43.973


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 10.04s


################################################################################
# Installation
#

Installing KmerAnalysis...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [a20136b7] + KmerAnalysis v0.4.4
    Updating `~/.julia/environments/v1.14/Manifest.toml`
⌅ [67c07d97] + Automa v0.8.4
  [47718e42] + BioGenerics v0.1.5
⌅ [7e6ae17a] + BioSequences v2.0.6
⌅ [3c28c6f8] + BioSymbols v4.0.4
  [861a8166] + Combinatorics v1.0.3
⌅ [c2308a5c] + FASTX v1.2.0
  [1cb3b9ac] + IndexableBitVectors v1.0.0
  [a20136b7] + KmerAnalysis v0.4.4
  [70a005b8] + ReadDatastores v0.4.0
⌅ [860ef19b] + StableRNGs v0.1.2
⌅ [3bb67fe8] + TranscodingStreams v0.9.13
  [7200193e] + Twiddle v1.1.2
  [2a0f44e3] + Base64 v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.13.0
  [8dfed614] + Test v1.11.0
  [4ec0a83e] + Unicode v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 3.79s


################################################################################
# Precompilation
#

ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:10
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/precompile.jl:6

caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:7
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577

Precompilation failed after 13.0s



################################################################################
# Testing
#

     Testing KmerAnalysis
      Status `/tmp/jl_enbXgJ/Project.toml`
⌅ [7e6ae17a] BioSequences v2.0.6
  [a20136b7] KmerAnalysis v0.4.4
  [70a005b8] ReadDatastores v0.4.0
  [8ba89e20] Distributed v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_enbXgJ/Manifest.toml`
⌅ [67c07d97] Automa v0.8.4
  [47718e42] BioGenerics v0.1.5
⌅ [7e6ae17a] BioSequences v2.0.6
⌅ [3c28c6f8] BioSymbols v4.0.4
  [861a8166] Combinatorics v1.0.3
⌅ [c2308a5c] FASTX v1.2.0
  [1cb3b9ac] IndexableBitVectors v1.0.0
  [a20136b7] KmerAnalysis v0.4.4
  [70a005b8] ReadDatastores v0.4.0
⌅ [860ef19b] StableRNGs v0.1.2
⌅ [3bb67fe8] TranscodingStreams v0.9.13
  [7200193e] Twiddle v1.1.2
  [2a0f44e3] Base64 v1.11.0
  [8ba89e20] Distributed v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [f489334b] StyledStrings v1.13.0
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
WARNING: method definition for IndexedCounts at /home/pkgeval/.julia/packages/KmerAnalysis/67DRc/src/IndexedCounts.jl:18 declares type variable M but does not use it.

  1 dependency had output during precompilation:
┌ KmerAnalysis
│  [Output was shown above]
└  
Test Summary: | Pass  Total  Time
Count Mode    |    2      2  0.5s
Test Summary: | Pass  Total  Time
MerCount      |    9      9  2.1s
Test Summary: | Pass  Total  Time
Counters      |    1      1  0.1s
     Testing KmerAnalysis tests passed 

Testing completed after 16.23s

PkgEval succeeded after 53.25s