Package evaluation to test AlphaShapes on Julia 1.14.0-DEV.1352 (749bc618c5*) started at 2025-12-09T21:57:14.241 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.69s ################################################################################ # Installation # Installing AlphaShapes... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [23a43136] + AlphaShapes v0.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [23a43136] + AlphaShapes v0.3.0 [a134a8b2] + BlackBoxOptim v0.6.3 [a9c8d775] + CPUTime v1.0.0 [34da2185] + Compat v4.18.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.15.0 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [978d7f02] + MiniQhull v0.4.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [a2af1166] + SortingAlgorithms v1.2.2 [d4ead438] + SpatialIndexing v0.1.6 [276daf66] + SpecialFunctions v2.6.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.9 [4c63d2b9] + StatsFuns v1.5.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [460c41e3] + QhullMiniWrapper_jll v1.0.0+1 ⌅ [784f63db] + Qhull_jll v8.0.1004+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.68s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 13.15s ################################################################################ # Testing # Testing AlphaShapes Status `/tmp/jl_uNNrkt/Project.toml` [23a43136] AlphaShapes v0.3.0 [a134a8b2] BlackBoxOptim v0.6.3 [b4f34e82] Distances v0.10.12 [978d7f02] MiniQhull v0.4.0 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_uNNrkt/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [23a43136] AlphaShapes v0.3.0 [a134a8b2] BlackBoxOptim v0.6.3 [a9c8d775] CPUTime v1.0.0 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.15.0 [34004b35] HypergeometricFunctions v0.3.28 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [2ab3a3ac] LogExpFunctions v0.3.29 [978d7f02] MiniQhull v0.4.0 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [a2af1166] SortingAlgorithms v1.2.2 [d4ead438] SpatialIndexing v0.1.6 [276daf66] SpecialFunctions v2.6.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.9 [4c63d2b9] StatsFuns v1.5.2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [460c41e3] QhullMiniWrapper_jll v1.0.0+1 ⌅ [784f63db] Qhull_jll v8.0.1004+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Running tests: ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for AlphaShapes [23a43136-1936-4ec7-b2ed-3a5dbec7203f] │ exception = Required dependency Base.PkgId(Base.UUID("34da2185-b29b-5c13-b0c7-acf172513d20"), "Compat") failed to load from a cache file. └ @ Base loading.jl:2891 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for BlackBoxOptim [a134a8b2-14d6-55f6-9291-3336d3ab0209] │ exception = Required dependency Base.PkgId(Base.UUID("34da2185-b29b-5c13-b0c7-acf172513d20"), "Compat") failed to load from a cache file. └ @ Base loading.jl:2891 Test Summary: | Pass Total Time Test Circum Sphere | 3 3 4.0s Test Summary: | Pass Total Time Test Volume | 1 1 0.4s Finding the optimum α value... Starting optimization with optimizer BlackBoxOptim.DiffEvoOpt{BlackBoxOptim.FitPopulation{Float64}, BlackBoxOptim.RadiusLimitedSelector, BlackBoxOptim.AdaptiveDiffEvoRandBin{3}, BlackBoxOptim.RandomBound{BlackBoxOptim.ContinuousRectSearchSpace}} 0.00 secs, 0 evals, 0 steps 0.54 secs, 10 evals, 5 steps, improv/step: 0.600 (last = 0.6000), fitness=11.642472685 1.10 secs, 20 evals, 10 steps, improv/step: 0.600 (last = 0.6000), fitness=11.626627121 1.64 secs, 32 evals, 16 steps, improv/step: 0.500 (last = 0.3333), fitness=9.837548992 2.22 secs, 47 evals, 24 steps, improv/step: 0.500 (last = 0.5000), fitness=9.837548992 2.74 secs, 60 evals, 32 steps, improv/step: 0.469 (last = 0.3750), fitness=9.735726656 3.30 secs, 72 evals, 39 steps, improv/step: 0.436 (last = 0.2857), fitness=9.735726656 3.80 secs, 84 evals, 46 steps, improv/step: 0.413 (last = 0.2857), fitness=9.314627865 4.33 secs, 96 evals, 53 steps, improv/step: 0.472 (last = 0.8571), fitness=9.314627865 4.86 secs, 107 evals, 60 steps, improv/step: 0.483 (last = 0.5714), fitness=9.314627865 5.44 secs, 120 evals, 68 steps, improv/step: 0.500 (last = 0.6250), fitness=9.314627865 6.01 secs, 133 evals, 77 steps, improv/step: 0.494 (last = 0.4444), fitness=9.314627865 6.51 secs, 145 evals, 85 steps, improv/step: 0.494 (last = 0.5000), fitness=9.314627865 7.09 secs, 158 evals, 94 steps, improv/step: 0.489 (last = 0.4444), fitness=9.314627865 Optimization stopped after 101 steps and 7.50 seconds Termination reason: Max number of steps (100) reached Steps per second = 13.47 Function evals per second = 22.40 Improvements/step = 0.50000 Total function evaluations = 168 Best candidate found: [0.2744] Fitness: 9.314627865 Finding the optimum α value... Starting optimization with optimizer BlackBoxOptim.DiffEvoOpt{BlackBoxOptim.FitPopulation{Float64}, BlackBoxOptim.RadiusLimitedSelector, BlackBoxOptim.AdaptiveDiffEvoRandBin{3}, BlackBoxOptim.RandomBound{BlackBoxOptim.ContinuousRectSearchSpace}} 0.00 secs, 0 evals, 0 steps 0.58 secs, 12 evals, 6 steps, improv/step: 0.667 (last = 0.6667), fitness=11.626627121 1.15 secs, 26 evals, 13 steps, improv/step: 0.538 (last = 0.4286), fitness=11.626627121 1.67 secs, 38 evals, 19 steps, improv/step: 0.474 (last = 0.3333), fitness=9.565805311 2.23 secs, 51 evals, 26 steps, improv/step: 0.577 (last = 0.8571), fitness=9.438489197 2.74 secs, 63 evals, 33 steps, improv/step: 0.545 (last = 0.4286), fitness=9.438489197 3.26 secs, 75 evals, 40 steps, improv/step: 0.575 (last = 0.7143), fitness=9.438489197 3.78 secs, 87 evals, 47 steps, improv/step: 0.596 (last = 0.7143), fitness=9.438489197 4.29 secs, 98 evals, 54 steps, improv/step: 0.556 (last = 0.2857), fitness=9.438489197 4.80 secs, 109 evals, 61 steps, improv/step: 0.541 (last = 0.4286), fitness=9.438489197 5.34 secs, 121 evals, 69 steps, improv/step: 0.536 (last = 0.5000), fitness=9.438489197 5.88 secs, 135 evals, 80 steps, improv/step: 0.500 (last = 0.2727), fitness=9.438489197 6.40 secs, 147 evals, 89 steps, improv/step: 0.494 (last = 0.4444), fitness=9.438489197 6.92 secs, 159 evals, 97 steps, improv/step: 0.505 (last = 0.6250), fitness=9.314627865 Optimization stopped after 101 steps and 7.22 seconds Termination reason: Max number of steps (100) reached Steps per second = 14.00 Function evals per second = 23.00 Improvements/step = 0.51000 Total function evaluations = 166 Best candidate found: [0.27143] Fitness: 9.314627865 [ Info: ("Runtime for 1000 2D points and 100 optimisation steps", 7.291489739) Test Summary: | Total Time Test Alpha Shape 2D | 0 34.7s Testing AlphaShapes tests passed Testing completed after 102.26s PkgEval succeeded after 140.85s