Package evaluation to test ProfileLikelihood on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T22:59:19.840 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.92s ################################################################################ # Installation # Installing ProfileLikelihood... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [3fca794e] + ProfileLikelihood v0.4.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.1 [4fba245c] + ArrayInterface v7.25.0 [13072b0f] + AxisAlgorithms v1.1.0 [70df07ce] + BracketingNonlinearSolve v1.12.1 [d360d2e6] + ChainRulesCore v1.26.1 ⌅ [ae650224] + ChunkSplitters v2.6.0 [38540f10] + CommonSolve v0.2.7 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.4 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 ⌅ [2b5f629d] + DiffEqBase v6.218.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 ⌅ [a0c0ee7d] + DifferentiationInterface v0.6.54 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.20 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v1.3.2 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [6a86dc24] + FiniteDiff v2.31.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v1.9.1 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 ⌅ [a98d9a8b] + Interpolations v0.15.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [ae98c720] + Jieko v0.2.1 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [bb5d69b7] + MaybeInplace v0.1.4 [2e0e35c7] + Moshi v0.3.8 [46d2c3a1] + MuladdMacro v0.2.4 [77ba4419] + NaNMath v1.1.4 ⌃ [be0214bd] + NonlinearSolveBase v2.11.2 [6fe1bfb0] + OffsetArrays v1.17.0 [e4521ec6] + PolygonInbounds v0.2.0 ⌅ [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [3fca794e] + ProfileLikelihood v0.4.1 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.19 ⌅ [0bca4576] + SciMLBase v2.155.1 ⌃ [19f34311] + SciMLJacobianOperators v0.1.11 ⌅ [a6db7da4] + SciMLLogging v1.10.1 [c0aeaf25] + SciMLOperators v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 ⌅ [727e6d20] + SimpleNonlinearSolve v1.12.5 [276daf66] + SpecialFunctions v2.8.0 [aedffcd0] + Static v1.4.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 ⌅ [4c63d2b9] + StatsFuns v1.5.2 [2efcf032] + SymbolicIndexingInterface v0.3.48 [1c621080] + TestItems v1.0.0 [a759f4b9] + TimerOutputs v0.5.29 [781d530d] + TruncatedStacktraces v1.4.0 [efce3f68] + WoodburyMatrices v1.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.29s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 8645.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseConnectivityTracerExt 2352.3 ms ✓ DynamicQuantities → DynamicQuantitiesRecursiveArrayToolsExt 1939.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStructArraysExt 1598.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 46949.2 ms ✓ SciMLBase 70060.6 ms ✓ SymbolicUtils 11741.4 ms ✓ Distributions 5107.1 ms ✓ PreallocationTools 11999.8 ms ✓ NLSolversBase 11432.8 ms ✓ DataInterpolations 2178.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 10385.1 ms ✓ NLopt → NLoptMathOptInterfaceExt 44483.2 ms ✓ SparseDiffTools → SparseDiffToolsPolyesterExt 4567.9 ms ✓ SciMLBase → SciMLBaseMLStyleExt 3649.9 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 8040.0 ms ✓ MovingBoundaryProblems1D 31318.3 ms ✓ OptimizationBase 11535.7 ms ✓ SciMLJacobianOperators 3974.7 ms ✓ SCCNonlinearSolve ✗ DynamicQuantities → DynamicQuantitiesSciMLBaseExt 11298.3 ms ✓ DiffEqBase 11558.3 ms ✓ SymbolicLimits 6053.2 ms ✓ Distributions → DistributionsTestExt 9109.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 30561.8 ms ✓ BlackBoxOptim 16911.7 ms ✓ PreallocationTools → PreallocationToolsSparseConnectivityTracerExt 7837.0 ms ✓ LineSearches 5914.7 ms ✓ DataInterpolations → DataInterpolationsChainRulesCoreExt 6797.8 ms ✓ SparseConnectivityTracer → SparseConnectivityTracerDataInterpolationsExt 181743.8 ms ✓ FiniteVolumeMethod 111811.3 ms ✓ LinearSolve 1426.0 ms ✓ OptimizationBase → OptimizationForwardDiffExt 829.9 ms ✓ OptimizationBase → OptimizationFiniteDiffExt 25919.3 ms ✓ Optimization 79184.4 ms ✓ LineSearch 20767.7 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 5534.5 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 10136.2 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 19854.2 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 4956.1 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 30658.8 ms ✓ DiffEqCallbacks 12063.6 ms ✓ OrdinaryDiffEqCore 7205.2 ms ✓ KernelDensity 204199.7 ms ✓ Symbolics 27994.5 ms ✓ Optim 122037.6 ms ✓ LinearSolve → LinearSolveEnzymeExt 11980.1 ms ✓ LinearSolve → LinearSolveRecursiveArrayToolsExt 33546.6 ms ✓ OptimizationNLopt 51819.8 ms ✓ OptimizationBBO 89497.7 ms ✓ LineSearch → LineSearchLineSearchesExt 149962.1 ms ✓ SimpleNonlinearSolve 150316.5 ms ✓ DiffEqNoiseProcess 43735.4 ms ✓ JumpProcesses 22025.1 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 591802.4 ms ✓ Makie ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000776506943d00 Total snapshots: 323. Utilization: 0% ╎323 @Base/asyncevent.jl:359 (::Base.var"#653#654"{FileWatching.Pidfile.var… ╎ 323 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 323 @Base/condition.jl:136 wait ╎ 323 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 323 @Base/task.jl:1228 wait() 322╎ 323 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_43684.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_finish_task at /source/src/task.c:342 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007eae70399ff0 Total snapshots: 356. Utilization: 0% ╎356 @Base/task.jl:868 task_done_hook(t::Task) ╎ 356 @Base/task.jl:1228 wait() 355╎ 356 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 60492243 (Pool: 60490851; Big: 1392); GC: 69 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:156 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 15023721 (Pool: 15023066; Big: 655); GC: 12 PkgEval terminated after 2753.38s: test duration exceeded the time limit