Package evaluation to test PortHamiltonianBenchmarkSystems on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T19:51:42.158 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.47s ################################################################################ # Installation # Installing PortHamiltonianBenchmarkSystems... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [a30e1a9a] + PortHamiltonianBenchmarkSystems v0.2.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [4c555306] + ArrayLayouts v1.12.2 [8e7c35d0] + BlockArrays v1.9.3 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [1a297f60] + FillArrays v1.16.0 [f67ccb44] + HDF5 v0.17.3 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.8.0 ⌅ [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.12 [a30e1a9a] + PortHamiltonianBenchmarkSystems v0.2.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [3bb67fe8] + TranscodingStreams v0.11.3 [0234f1f7] + HDF5_jll v2.1.2+0 [e33a78d0] + Hwloc_jll v2.14.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [b5ada748] + MPIABI_jll v0.1.5+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 ⌅ [2b3700d1] + aws_c_auth_jll v0.9.6+0 [70f11efc] + aws_c_cal_jll v0.9.13+0 [73048d1d] + aws_c_common_jll v0.12.6+0 [73a04cd5] + aws_c_compression_jll v0.3.2+0 [3254fc65] + aws_c_http_jll v0.10.13+0 [13c41daa] + aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] + aws_c_s3_jll v0.11.5+0 [1282aa60] + aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] + aws_checksums_jll v0.2.10+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [477f73a3] + libaec_jll v1.1.7+0 [9aeb927a] + mpif_jll v0.1.7+0 [cddc5d3d] + s2n_tls_jll v1.7.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 9244.0 ms ✓ PortHamiltonianBenchmarkSystems 1 dependency successfully precompiled in 10 seconds. 78 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 43 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 37.27s ################################################################################ # Testing # Testing PortHamiltonianBenchmarkSystems Status `/tmp/jl_t2aoY2/Project.toml` [4c88cf16] Aqua v0.8.16 [8e7c35d0] BlockArrays v1.9.3 [c8e1da08] IterTools v1.10.0 ⌅ [23992714] MAT v0.10.7 [a30e1a9a] PortHamiltonianBenchmarkSystems v0.2.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_t2aoY2/Manifest.toml` [4c88cf16] Aqua v0.8.16 [4c555306] ArrayLayouts v1.12.2 [8e7c35d0] BlockArrays v1.9.3 [e1450e63] BufferedStreams v1.2.2 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [1a297f60] FillArrays v1.16.0 [f67ccb44] HDF5 v0.17.3 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.8.0 ⌅ [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.12 [a30e1a9a] PortHamiltonianBenchmarkSystems v0.2.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [ae029012] Requires v1.3.1 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [3bb67fe8] TranscodingStreams v0.11.3 [0234f1f7] HDF5_jll v2.1.2+0 [e33a78d0] Hwloc_jll v2.14.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [b5ada748] MPIABI_jll v0.1.5+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 ⌅ [2b3700d1] aws_c_auth_jll v0.9.6+0 [70f11efc] aws_c_cal_jll v0.9.13+0 [73048d1d] aws_c_common_jll v0.12.6+0 [73a04cd5] aws_c_compression_jll v0.3.2+0 [3254fc65] aws_c_http_jll v0.10.13+0 [13c41daa] aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] aws_c_s3_jll v0.11.5+0 [1282aa60] aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] aws_checksums_jll v0.2.10+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.7+0 [9aeb927a] mpif_jll v0.1.7+0 [cddc5d3d] s2n_tls_jll v1.7.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 207 running 1 of 1 signal (10): User defined signal 1 unknown function (ip: 0x792bd4e22b6f) at /lib/x86_64-linux-gnu/libc.so.6 memmove at ./cmem.jl:28 [inlined] unsafe_copyto! at ./genericmemory.jl:125 [inlined] unsafe_copyto! at ./genericmemory.jl:143 [inlined] _growat! at ./array.jl:1191 _insert! at ./array.jl:1786 [inlined] insert! at ./array.jl:1781 [inlined] _insert! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3230 [inlined] _setindex_scalar! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3218 setindex! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3192 [inlined] setindex! at ./subarray.jl:386 [inlined] transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:123 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transpose_f! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:114 adjoint! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:76 [inlined] copyto_unaliased! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:252 [inlined] copyto! at ./abstractarray.jl:1070 copyto! at ./broadcast.jl:988 [inlined] copyto! at ./broadcast.jl:947 [inlined] materialize! at ./broadcast.jl:905 [inlined] materialize! at ./broadcast.jl:902 [inlined] construct_system at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/src/DampedWaveNet.jl:166 unknown function (ip: 0x792baa5dad2d) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 macro expansion at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/test/DampedWaveNetTests.jl:26 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] top-level scope at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/test/DampedWaveNetTests.jl:2 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_invoke at /source/src/gf.c:4021 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x792bd4cf7249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 jfptr_wait_70429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2556 unknown function (ip: 0x7d8294b81543) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2496 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2311 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2164 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2278 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7d8294b7775c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2225 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2215 unknown function (ip: 0x7d8294b6cb59) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2481 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] #test#174 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:529 unknown function (ip: 0x7d8294b6c0b1) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7d8294b67e00) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7d8294b61a7f) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7d82af439249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d8294bfc010 Total snapshots: 316. Utilization: 0% ╎316 @Base/client.jl:550 _start() ╎ 316 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 316 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 316 @Base/loading.jl:2933 _include(mapexpr::Function, mod::Module, _pat… ╎ 316 @Base/loading.jl:2873 include_string(mapexpr::typeof(identity), mo… ╎ 316 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 316 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 316 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 316 @Pkg/src/API.jl:157 test ╎ ╎ 316 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 316 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 316 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 316 @Pkg/src/API.jl:529 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 316 @Pkg/src/API.jl:552 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 316 @Pkg/…erations.jl:2387 test ╎ ╎ ╎ 316 @Pkg/…erations.jl:2481 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 316 @Pkg/…rations.jl:2215 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 316 @Pkg/…rations.jl:2225 #sandbox#182 ╎ ╎ ╎ ╎ 316 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 316 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 316 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 316 @Pkg/…tions.jl:2278 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 316 @Pkg/…tions.jl:2164 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 316 @Pkg/…tions.jl:2311 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 316 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 316 @Pkg/…ions.jl:2496 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 316 @Pkg/…ons.jl:2556 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…ss.jl:693 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…sk.jl:1228 wait() 315╎ ╎ ╎ ╎ ╎ ╎ ╎ 316 @Base/…sk.jl:1216 poptask(W::Base.Intr… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 24277436 (Pool: 24276714; Big: 722); GC: 17 [207] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/test/DampedWaveNetTests.jl:1 unknown function (ip: 0x792bd4e22b73) at /lib/x86_64-linux-gnu/libc.so.6 memmove at ./cmem.jl:28 [inlined] unsafe_copyto! at ./genericmemory.jl:125 [inlined] unsafe_copyto! at ./genericmemory.jl:143 [inlined] _growat! at ./array.jl:1191 _insert! at ./array.jl:1786 [inlined] insert! at ./array.jl:1781 [inlined] _insert! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3230 [inlined] _setindex_scalar! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3218 setindex! at /source/usr/share/julia/stdlib/v1.12/SparseArrays/src/sparsematrix.jl:3192 [inlined] setindex! at ./subarray.jl:386 [inlined] transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:123 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:133 transpose_f! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:114 adjoint! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:76 [inlined] copyto_unaliased! at /source/usr/share/julia/stdlib/v1.12/LinearAlgebra/src/transpose.jl:252 [inlined] copyto! at ./abstractarray.jl:1070 copyto! at ./broadcast.jl:988 [inlined] copyto! at ./broadcast.jl:947 [inlined] materialize! at ./broadcast.jl:905 [inlined] materialize! at ./broadcast.jl:902 [inlined] construct_system at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/src/DampedWaveNet.jl:166 unknown function (ip: 0x792baa5dad2d) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 macro expansion at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/test/DampedWaveNetTests.jl:26 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] top-level scope at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/KgrkM/test/DampedWaveNetTests.jl:2 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_invoke at /source/src/gf.c:4021 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x792bd4cf7249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 94603485 (Pool: 94601989; Big: 1496); GC: 41 PkgEval terminated after 2722.24s: test duration exceeded the time limit