Package evaluation to test OnlineNMF on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-20T06:39:10.661 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.31s ################################################################################ # Installation # Installing OnlineNMF... Resolving package versions... Installed WebIO ──── v0.8.21 Installed PlotlyJS ─ v0.18.18 Updating `~/.julia/environments/v1.12/Project.toml` [e0c94d91] + OnlineNMF v0.99.6 Updating `~/.julia/environments/v1.12/Manifest.toml` [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [c7e460c6] + ArgParse v1.2.0 [4fba245c] + ArrayInterface v7.25.0 [bf4720bc] + AssetRegistry v0.1.1 [d1d4a3ce] + BitFlags v0.1.10 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [ad839575] + Blink v0.12.9 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.16 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.1 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.5 [f67ccb44] + HDF5 v0.17.3 ⌅ [cd3eb016] + HTTP v1.11.0 [9fb69e20] + Hiccup v0.2.2 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [97c1335a] + JSExpr v0.5.4 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v1.0.1 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.174 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [4d4711f2] + MatrixMarket v0.5.2 [739be429] + MbedTLS v1.1.10 [e1d29d7a] + Missings v1.2.0 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [e0c94d91] + OnlineNMF v0.99.6 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.6.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 ⌅ [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.6 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.23 [f0f68f2c] + PlotlyJS v0.18.18 [f2990250] + PlotlyKaleido v2.3.1 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.3.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.46 [431bcebd] + SciMLPublic v1.0.1 [91c51154] + SentinelArrays v1.4.10 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [aedffcd0] + Static v1.4.0 [0d7ed370] + StaticArrayInterface v1.10.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [3eaba693] + StatsModels v0.7.10 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b718987f] + TextWrap v1.0.2 [8290d209] + ThreadingUtilities v0.5.6 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.74 [ea10d353] + WeakRefStrings v1.4.3 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 [0234f1f7] + HDF5_jll v2.1.2+0 [e33a78d0] + Hwloc_jll v2.14.0+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [b5ada748] + MPIABI_jll v0.1.5+0 [7cb0a576] + MPICH_jll v5.0.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.11+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 ⌅ [2b3700d1] + aws_c_auth_jll v0.9.6+0 [70f11efc] + aws_c_cal_jll v0.9.13+0 [73048d1d] + aws_c_common_jll v0.12.6+0 [73a04cd5] + aws_c_compression_jll v0.3.2+0 [3254fc65] + aws_c_http_jll v0.10.13+0 [13c41daa] + aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] + aws_c_s3_jll v0.11.5+0 [1282aa60] + aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] + aws_checksums_jll v0.2.10+0 [c4b69c83] + dlfcn_win32_jll v1.4.2+0 [477f73a3] + libaec_jll v1.1.7+0 [9aeb927a] + mpif_jll v0.1.7+0 [cddc5d3d] + s2n_tls_jll v1.7.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/4bf6c08295346efba58bb2d5f8c52984efed7f27/build.log` Installation completed after 35.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 18486.0 ms ✓ OnlineNMF 1 dependency successfully precompiled in 30 seconds. 203 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 111 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 56.91s ################################################################################ # Testing # Testing OnlineNMF Status `/tmp/jl_HYOPBx/Project.toml` [c7e460c6] ArgParse v1.2.0 [6b39b394] CodecZstd v0.8.7 [a93c6f00] DataFrames v1.8.2 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.127 [bdcacae8] LoopVectorization v0.12.174 [4d4711f2] MatrixMarket v0.5.2 [e0c94d91] OnlineNMF v0.99.6 [975b03d1] OnlinePCA v0.3.10 [f0f68f2c] PlotlyJS v0.18.18 [92933f4c] ProgressMeter v1.11.0 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_HYOPBx/Manifest.toml` [79e6a3ab] Adapt v4.6.1 [66dad0bd] AliasTables v1.1.3 [c7e460c6] ArgParse v1.2.0 [4fba245c] ArrayInterface v7.25.0 [bf4720bc] AssetRegistry v0.1.1 [d1d4a3ce] BitFlags v0.1.10 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [ad839575] Blink v0.12.9 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.16 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.1 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.127 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 ⌅ [53c48c17] FixedPointNumbers v0.8.6 [de31a74c] FunctionalCollections v0.5.0 [38e38edf] GLM v1.9.5 [f67ccb44] HDF5 v0.17.3 ⌅ [cd3eb016] HTTP v1.11.0 [9fb69e20] Hiccup v0.2.2 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [97c1335a] JSExpr v0.5.4 ⌅ [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [50d2b5c4] Lazy v0.15.1 [2ab3a3ac] LogExpFunctions v1.0.1 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.174 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [4d4711f2] MatrixMarket v0.5.2 [739be429] MbedTLS v1.1.10 [e1d29d7a] Missings v1.2.0 [ffc61752] Mustache v1.0.21 [a975b10e] Mux v1.0.2 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [e0c94d91] OnlineNMF v0.99.6 [975b03d1] OnlinePCA v0.3.10 [4d8831e6] OpenSSL v1.6.1 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.37 ⌅ [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.6 [fa939f87] Pidfile v1.3.0 [a03496cd] PlotlyBase v0.8.23 [f0f68f2c] PlotlyJS v0.18.18 [f2990250] PlotlyKaleido v2.3.1 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.46 [431bcebd] SciMLPublic v1.0.1 [91c51154] SentinelArrays v1.4.10 [1277b4bf] ShiftedArrays v2.0.0 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.8.0 [aedffcd0] Static v1.4.0 [0d7ed370] StaticArrayInterface v1.10.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [3eaba693] StatsModels v0.7.10 [892a3eda] StringManipulation v0.4.4 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [b718987f] TextWrap v1.0.2 [8290d209] ThreadingUtilities v0.5.6 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [3d5dd08c] VectorizationBase v0.21.74 [ea10d353] WeakRefStrings v1.4.3 [0f1e0344] WebIO v0.8.21 [104b5d7c] WebSockets v1.6.0 [cc8bc4a8] Widgets v0.6.7 [76eceee3] WorkerUtilities v1.6.1 [0234f1f7] HDF5_jll v2.1.2+0 [e33a78d0] Hwloc_jll v2.14.0+0 [f7e6163d] Kaleido_jll v0.2.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [b5ada748] MPIABI_jll v0.1.5+0 [7cb0a576] MPICH_jll v5.0.1+0 [f1f71cc9] MPItrampoline_jll v5.5.6+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.11+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.19.0+0 [3161d3a3] Zstd_jll v1.5.7+1 ⌅ [2b3700d1] aws_c_auth_jll v0.9.6+0 [70f11efc] aws_c_cal_jll v0.9.13+0 [73048d1d] aws_c_common_jll v0.12.6+0 [73a04cd5] aws_c_compression_jll v0.3.2+0 [3254fc65] aws_c_http_jll v0.10.13+0 [13c41daa] aws_c_io_jll v0.26.3+0 ⌅ [bd1f34fb] aws_c_s3_jll v0.11.5+0 [1282aa60] aws_c_sdkutils_jll v0.2.4+1 [b2a88e68] aws_checksums_jll v0.2.10+0 [c4b69c83] dlfcn_win32_jll v1.4.2+0 [477f73a3] libaec_jll v1.1.7+0 [9aeb927a] mpif_jll v0.1.7+0 [cddc5d3d] s2n_tls_jll v1.7.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 16209.9 ms ✓ PlotlyBase 1493.7 ms ✓ ColorVectorSpace → SpecialFunctionsExt 21492.8 ms ✓ StatsModels 14253.8 ms ✓ HDF5 166446.8 ms ✓ PlotlyBase → DataFramesExt 26818.4 ms ✓ PlotlyBase → DistributionsExt 75993.7 ms ✓ PlotlyJS 15343.0 ms ✓ GLM 14189.0 ms ✓ PlotlyJS → CSVExt 174033.3 ms ✓ PlotlyJS → DataFramesExt 1.004749e6 ms ✓ OnlinePCA 11 dependencies successfully precompiled in 1542 seconds. 166 already precompiled. 28 dependencies precompiled but different versions are currently loaded (ArgParse, Base64, CodecZstd, Compat, Compat → CompatLinearAlgebraExt, Dates, DelimitedFiles, Distributed, DocStringExtensions, JLLWrappers, JuliaSyntaxHighlighting, Logging, Markdown, Mmap, PrecompileTools, Preferences, Printf, ProgressMeter, Serialization, SparseArrays, StyledStrings, SuiteSparse_jll, TOML, TextWrap, TranscodingStreams, UUIDs, UnPack and Zstd_jll). Restart julia to access the new versions. Otherwise, 97 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 9322.8 ms ✓ LoopVectorization → SpecialFunctionsExt 1 dependency successfully precompiled in 11 seconds. 53 already precompiled. 45 dependencies precompiled but different versions are currently loaded (ArrayInterface, Base64, BitTwiddlingConvenienceFunctions, CPUSummary, CloseOpenIntervals, CommonWorldInvalidations, Compat, Compat → CompatLinearAlgebraExt, CompilerSupportLibraries_jll, CpuId, Dates, DocStringExtensions, HostCPUFeatures, IfElse, IrrationalConstants, JLLWrappers, JuliaSyntaxHighlighting, LayoutPointers, LogExpFunctions, LoopVectorization, ManualMemory, Markdown, OffsetArrays, OpenLibm_jll, OpenSpecFun_jll, PolyesterWeave, PrecompileTools, Preferences, Printf, Requires, SIMDTypes, SLEEFPirates, SciMLPublic, SpecialFunctions, Static, StaticArrayInterface, StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt, Statistics, StyledStrings, TOML, ThreadingUtilities, UUIDs, UnPack, Unicode and VectorizationBase). Restart julia to access the new versions. Otherwise, 7 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 7331.0 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 11 seconds. 48 already precompiled. 48 dependencies precompiled but different versions are currently loaded (AliasTables, Base64, CompilerSupportLibraries_jll, DataAPI, DataStructures, Dates, Distributions, DocStringExtensions, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, HypergeometricFunctions, InteractiveUtils, IrrationalConstants, JLLWrappers, JuliaSyntaxHighlighting, LogExpFunctions, Logging, Markdown, Missings, OpenLibm_jll, OpenSpecFun_jll, OrderedCollections, PDMats, PDMats → StatsBaseExt, Preferences, Printf, PtrArrays, QuadGK, Reexport, Rmath, Rmath_jll, Serialization, SortingAlgorithms, SparseArrays, SpecialFunctions, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, StyledStrings, SuiteSparse, SuiteSparse_jll, TOML, Test and Unicode). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 Running all tests... ####### NMF (Alpha, Julia API) ####### ####### NMF (Beta, Julia API) ####### ####### NMF (Alpha, Command line) ####### Precompiling packages... 340330.8 ms ✓ PlotlyBase → DataFramesExt 40131.8 ms ✓ PlotlyBase → DistributionsExt 3538.6 ms ✓ LoopVectorization → SpecialFunctionsExt 19919.9 ms ✓ PlotlyJS → DataFramesExt 5560.4 ms ✓ OnlineNMF 5 dependencies successfully precompiled in 417 seconds. 199 already precompiled. Parsed args: logdir => "/tmp/jl_B3vJYB" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_B3vJYB" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => "1" l2v => 1.1920929f-7 algorithm => "alpha" input => "/tmp/jl_B3vJYB/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => 2 initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### NMF (Beta, Command line) ####### Parsed args: logdir => "/tmp/jl_B3vJYB" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_B3vJYB" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => 1 l2v => 1.1920929f-7 algorithm => "beta" input => "/tmp/jl_B3vJYB/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### DNMF (Julia API) ####### ####### DNMF (Command line) ####### Parsed args: chunksize => "51" terv => 1.1920929f-7 binu => 1.1920929f-7 logdir => "/tmp/jl_B3vJYB" upper => 1.0f38 l1u => 1.1920929f-7 binv => 1.1920929f-7 outdir => "/tmp/jl_B3vJYB" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 l2v => 1.1920929f-7 input => "/tmp/jl_B3vJYB/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" teru => 1.1920929f-7 Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### Sparse-NMF (Alpha, Julia API) ####### Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### Sparse-NMF (Beta, Julia API) ####### ####### Sparse-NMF (Alpha, Command line) ####### Parsed args: logdir => "/tmp/jl_B3vJYB" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_B3vJYB" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => "1" l2v => 1.1920929f-7 algorithm => "alpha" input => "/tmp/jl_B3vJYB/Data.mtx.zst" l2u => 1.1920929f-7 numepoch => 5 beta => 2 initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### Sparse-NMF (Beta, Command line) ####### Parsed args: logdir => "/tmp/jl_B3vJYB" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_B3vJYB" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => 1 l2v => 1.1920929f-7 algorithm => "beta" input => "/tmp/jl_B3vJYB/Data.mtx.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### Sparse-DNMF (Julia API) ####### Progress: 80%|████████████████████████████████▊ | ETA: 0:00:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### Sparse-DNMF (Command line) ####### ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 439 running 1 of 1 signal (10): User defined signal 1 jl_has_bound_typevars at /source/src/jltypes.c:248 ijl_has_typevar at /source/src/jltypes.c:276 ijl_type_unionall at /source/src/jltypes.c:943 sub_msp at /source/src/subtype.c:5114 type_morespecific_ at /source/src/subtype.c:5379 type_morespecific_ at /source/src/subtype.c:5537 type_morespecific_ at /source/src/subtype.c:5537 type_morespecific_ at /source/src/subtype.c:5537 type_morespecific_ at /source/src/subtype.c:5514 type_morespecific_ at /source/src/subtype.c:5514 type_morespecific_ at /source/src/subtype.c:5489 type_morespecific_ at /source/src/subtype.c:5449 type_morespecific_ at /source/src/subtype.c:5537 type_morespecific_ at /source/src/subtype.c:5514 tuple_morespecific at /source/src/subtype.c:5197 [inlined] type_morespecific_ at /source/src/subtype.c:5365 jl_method_table_activate at /source/src/gf.c:2881 jl_activate_methods at /source/src/staticdata_utils.c:762 [inlined] jl_restore_package_image_from_stream at /source/src/staticdata.c:4478 jl_restore_incremental_from_buf at /source/src/staticdata.c:4520 ijl_restore_package_image_from_file at /source/src/staticdata.c:4587 #_include_from_serialized#887 at ./loading.jl:1300 _include_from_serialized at ./loading.jl:1276 [inlined] #_require_search_from_serialized#903 at ./loading.jl:2103 _require_search_from_serialized at ./loading.jl:2010 [inlined] __require_prelocked at ./loading.jl:2628 _require_prelocked at ./loading.jl:2494 macro expansion at ./loading.jl:2422 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2387 jfptr___require_72496.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:900 require at ./loading.jl:2363 jfptr_require_35976.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 jl_toplevel_eval_flex at /source/src/toplevel.c:830 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x769be5ca1249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 221 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 [inlined] success at ./process.jl:555 #run#724 at ./process.jl:512 run at ./process.jl:509 unknown function (ip: 0x725bba39d4eb) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x725be658f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 jfptr_wait_70429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2556 unknown function (ip: 0x79b01f98cd43) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2496 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2311 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2164 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2278 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x79b01f98013c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2225 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2215 unknown function (ip: 0x79b01f97e829) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2481 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] #test#174 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:529 unknown function (ip: 0x79b01f97e461) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x79b01f97d560) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x79b01f9730bf) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x79b03bdfa249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000079b0215fc010 Total snapshots: 70. Utilization: 0% ╎70 @Base/client.jl:550 _start() ╎ 70 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 70 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 70 @Base/loading.jl:2933 _include(mapexpr::Function, mod::Module, _path:… ╎ 70 @Base/loading.jl:2873 include_string(mapexpr::typeof(identity), mod:… ╎ 70 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 70 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 70 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 70 @Pkg/src/API.jl:157 test ╎ ╎ 70 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.Pai… ╎ ╎ 70 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 70 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOCon… ╎ ╎ ╎ 70 @Pkg/src/API.jl:529 kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 70 @Pkg/src/API.jl:552 test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 70 @Pkg/…perations.jl:2387 test ╎ ╎ ╎ 70 @Pkg/…perations.jl:2481 test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 70 @Pkg/…erations.jl:2215 kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 70 @Pkg/…erations.jl:2225 #sandbox#182 ╎ ╎ ╎ ╎ 70 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 70 @Base/file.jl:932 mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 70 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 70 @Pkg/…ations.jl:2278 (::Pkg.Operations.var"#186#187… ╎ ╎ ╎ ╎ ╎ 70 @Pkg/…ations.jl:2164 with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 70 @Pkg/…tions.jl:2311 (::Pkg.Operations.var"#190#19… ╎ ╎ ╎ ╎ ╎ 70 @Base/env.jl:265 withenv(::Pkg.Operations.var"#2… ╎ ╎ ╎ ╎ ╎ 70 @Pkg/…tions.jl:2496 (::Pkg.Operations.var"#205#… ╎ ╎ ╎ ╎ ╎ ╎ 70 @Pkg/…ions.jl:2556 subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…ess.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…ess.jl:693 wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…on.jl:141 wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…sk.jl:1228 wait() 69╎ ╎ ╎ ╎ ╎ ╎ ╎ 70 @Base/…sk.jl:1216 poptask(W::Base.Intrus… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 [439] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlineNMF/Txaf3/bin/sparse_dnmf:151 ijl_box_int64 at /source/src/datatype.c:1531 getindex at ./essentials.jl:935 [inlined] #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] iterate at ./essentials.jl:941 [inlined] _all at ./anyall.jl:203 [inlined] all at ./anyall.jl:188 [inlined] abstract_call_method at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:609 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:167 start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 36794843 (Pool: 36794076; Big: 767); GC: 23 jfptr_infercalls_79016.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_invoke at /source/src/gf.c:4021 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:338 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2822 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2931 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2924 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3084 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3102 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3431 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3877 [inlined] [221] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlineNMF/Txaf3/test/test_sparse_dnmf.jl:13 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3834 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4388 jfptr_typeinf_local_84207.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4581 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1256 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1439 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1448 jfptr_typeinf_ext_toplevel_82967.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_type_infer at /source/src/gf.c:466 jl_compile_method_internal at /source/src/gf.c:3516 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 annotatedstring at ./strings/annotated.jl:245 tree_format at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1059 print_tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1254 tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1308 print_group at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:389 #print#5 at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:331 print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 _peek_report at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:94 unknown function (ip: 0x769be471c56f) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_f_invokelatest at /source/src/builtins.c:881 profile_printing_listener at ./Base.jl:334 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 13084003 (Pool: 13083891; Big: 112); GC: 9 _ZL13MatchBinaryOpPN4llvm5ValueERKNS_10DataLayoutERNS_15AssumptionCacheERKNS_13DominatorTreeEPKNS_11InstructionE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution10createSCEVEPNS_5ValueE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution14createSCEVIterEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution24computeExitLimitFromICmpEPKNS_4LoopEPNS_8ICmpInstEbbb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution28computeExitLimitFromCondImplERNS0_14ExitLimitCacheEPKNS_4LoopEPNS_5ValueEbbb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution30computeExitLimitFromCondCachedERNS0_14ExitLimitCacheEPKNS_4LoopEPNS_5ValueEbbb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution24computeExitLimitFromCondEPKNS_4LoopEPNS_5ValueEbbb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution16computeExitLimitEPKNS_4LoopEPNS_10BasicBlockEb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution25computeBackedgeTakenCountEPKNS_4LoopEb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution20getBackedgeTakenInfoEPKNS_4LoopE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm15ScalarEvolution25getSmallConstantTripCountEPKNS_4LoopEPKNS_10BasicBlockE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZL15tryToUnrollLoopPN4llvm4LoopERNS_13DominatorTreeEPNS_8LoopInfoERNS_15ScalarEvolutionERKNS_19TargetTransformInfoERNS_15AssumptionCacheERNS_25OptimizationRemarkEmitterEPNS_18BlockFrequencyInfoEPNS_18ProfileSummaryInfoEbibbbSt8optionalIjESK_SJ_IbESL_SL_SL_SL_SK_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14LoopUnrollPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 run at /source/usr/include/llvm/IR/PassManager.h:543 [inlined] run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/src/pipeline.cpp:741 operator() at /source/src/jitlayers.cpp:1459 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1420 [inlined] operator() at /source/src/jitlayers.cpp:1572 [inlined] addModule at /source/src/jitlayers.cpp:2031 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3528 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_f_invokelatest at /source/src/builtins.c:881 profile_printing_listener at ./Base.jl:334 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 128124355 (Pool: 128122998; Big: 1357); GC: 139 PkgEval terminated after 2733.5s: test duration exceeded the time limit