Package evaluation to test LaplacianExpectationMaximization on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T22:08:41.433 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.43s ################################################################################ # Installation # Installing LaplacianExpectationMaximization... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [610349f3] + LaplacianExpectationMaximization v0.1.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.25.0 [d360d2e6] + ChainRulesCore v1.26.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b0b7db55] + ComponentArrays v0.15.39 [2569d6c7] + ConcreteStructs v0.2.4 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [a0c0ee7d] + DifferentiationInterface v0.7.18 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [5789e2e9] + FileIO v1.19.0 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.31.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [d9f16b24] + Functors v0.5.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.6 ⌅ [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.8.0 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌃ [d3d80556] + LineSearches v7.5.1 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.4 ⌅ [429524aa] + Optim v1.13.3 [3bd65402] + Optimisers v0.4.7 [65fa8838] + OptimizationCallbacks v0.1.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [431bcebd] + SciMLPublic v1.0.1 [7e506255] + ScopedValues v1.6.2 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [aedffcd0] + Static v1.4.0 [0d7ed370] + StaticArrayInterface v1.10.0 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [3bb67fe8] + TranscodingStreams v0.11.3 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.46s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 1365.6 ms ✓ OptimizationBase → OptimizationForwardDiffExt 38179.4 ms ✓ OptimizationBase → OptimizationEnzymeExt 87523.4 ms ✓ LaplacianExpectationMaximization 123405.1 ms ✓ OptimizationOptimJL 80621.9 ms ✓ LaplacianExpectationMaximization → OptimizationExt 105278.9 ms ✓ LaplacianExpectationMaximization → EnzymeExt 10861.2 ms ✓ LaplacianExpectationMaximization → NLoptExt 7 dependencies successfully precompiled in 456 seconds. 233 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 126 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 472.93s ################################################################################ # Testing # Testing LaplacianExpectationMaximization Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_c4nrwc/Project.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.22.0 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.16 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.39 [2569d6c7] ↑ ConcreteStructs v0.2.3 ⇒ v0.2.4 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.127 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.162 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.31.0 ⌅ [f6369f11] ↑ ForwardDiff v0.10.38 ⇒ v0.10.39 [c3a54625] ↑ JET v0.9.12 ⇒ v0.11.4 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌅ [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.7 ⌅ [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.8.0 ⌃ [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.5 Updating `/tmp/jl_c4nrwc/Manifest.toml` [47edcb42] ↑ ADTypes v1.11.0 ⇒ v1.22.0 [7d9f7c33] ↑ Accessors v0.1.38 ⇒ v0.1.44 [79e6a3ab] ↑ Adapt v4.1.1 ⇒ v4.6.1 [4c88cf16] ↑ Aqua v0.8.9 ⇒ v0.8.16 [4fba245c] ↑ ArrayInterface v7.17.1 ⇒ v7.25.0 [d360d2e6] ↑ ChainRulesCore v1.25.0 ⇒ v1.26.1 [da1fd8a2] ↑ CodeTracking v1.3.6 ⇒ v3.0.2 [38540f10] ↑ CommonSolve v0.2.4 ⇒ v0.2.7 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.1 [807dbc54] + Compiler v0.1.1 [b0b7db55] ↑ ComponentArrays v0.15.19 ⇒ v0.15.39 [2569d6c7] ↑ ConcreteStructs v0.2.3 ⇒ v0.2.4 [187b0558] ↑ ConstructionBase v1.5.8 ⇒ v1.6.0 [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.19.5 [e2d170a0] - DataValueInterfaces v1.0.0 [b552c78f] ↑ DiffRules v1.15.1 ⇒ v1.16.0 [a0c0ee7d] ↑ DifferentiationInterface v0.6.23 ⇒ v0.7.18 [31c24e10] ↑ Distributions v0.25.113 ⇒ v0.25.127 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [4e289a0a] ↑ EnumX v1.0.4 ⇒ v1.0.7 [7da242da] ↑ Enzyme v0.13.16 ⇒ v0.13.162 [f151be2c] ↑ EnzymeCore v0.8.6 ⇒ v0.8.20 [6b7a57c9] - Expronicon v0.8.5 [55351af7] + ExproniconLite v0.10.14 [5789e2e9] ↑ FileIO v1.16.6 ⇒ v1.19.0 [1a297f60] ↑ FillArrays v1.13.0 ⇒ v1.16.0 [6a86dc24] ↑ FiniteDiff v2.26.2 ⇒ v2.31.0 ⌅ [f6369f11] ↑ ForwardDiff v0.10.38 ⇒ v0.10.39 [77dc65aa] ↑ FunctionWrappersWrappers v0.1.3 ⇒ v1.9.1 [d9f16b24] ↑ Functors v0.5.1 ⇒ v0.5.2 [61eb1bfa] ↑ GPUCompiler v1.0.1 ⇒ v1.22.1 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.25 ⇒ v0.3.28 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [c3a54625] ↑ JET v0.9.12 ⇒ v0.11.4 ⌅ [033835bb] ↑ JLD2 v0.5.10 ⇒ v0.5.15 [692b3bcd] ↑ JLLWrappers v1.6.1 ⇒ v1.8.0 [ae98c720] + Jieko v0.2.1 [aa1ae85d] ↑ JuliaInterpreter v0.9.38 ⇒ v0.10.12 [70703baa] + JuliaSyntax v1.0.2 [929cbde3] ↑ LLVM v9.1.3 ⇒ v9.9.0 [610349f3] + LaplacianExpectationMaximization v0.1.0 ⌅ [1d6d02ad] ↑ LeftChildRightSiblingTrees v0.2.0 ⇒ v0.2.1 ⌃ [d3d80556] ↑ LineSearches v7.3.0 ⇒ v7.5.1 ⌅ [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [e6f89c97] ↑ LoggingExtras v1.1.0 ⇒ v1.2.0 ⌅ [6f1432cf] ↑ LoweredCodeUtils v3.1.0 ⇒ v3.5.3 [d8e11817] - MLStyle v0.4.17 [1914dd2f] ↑ MacroTools v0.5.13 ⇒ v0.5.16 [2e0e35c7] + Moshi v0.3.8 ⌅ [d41bc354] ↑ NLSolversBase v7.8.3 ⇒ v7.10.0 [76087f3c] ↑ NLopt v1.1.1 ⇒ v1.2.1 [77ba4419] ↑ NaNMath v1.0.2 ⇒ v1.1.4 [d8793406] ↑ ObjectFile v0.4.2 ⇒ v0.5.0 ⌅ [429524aa] ↑ Optim v1.10.0 ⇒ v1.13.3 [3bd65402] ↑ Optimisers v0.4.1 ⇒ v0.4.7 ⌅ [7f7a1694] ↑ Optimization v4.0.5 ⇒ v4.8.0 ⌅ [bca83a33] ↑ OptimizationBase v2.4.0 ⇒ v2.14.0 [65fa8838] + OptimizationCallbacks v0.1.0 ⌃ [36348300] ↑ OptimizationOptimJL v0.4.1 ⇒ v0.4.5 ⌅ [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.2 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.37 [d96e819e] - Parameters v0.12.3 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] ↑ PrecompileTools v1.2.1 ⇒ v1.3.4 [21216c6a] ↑ Preferences v1.4.3 ⇒ v1.5.2 [33c8b6b6] ↑ ProgressLogging v0.1.4 ⇒ v0.1.6 [92933f4c] ↑ ProgressMeter v1.10.2 ⇒ v1.11.0 [43287f4e] ↑ PtrArrays v1.2.1 ⇒ v1.4.0 [1fd47b50] ↑ QuadGK v2.11.1 ⇒ v2.11.3 ⌅ [731186ca] ↑ RecursiveArrayTools v3.27.4 ⇒ v3.54.0 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [295af30f] + Revise v3.15.1 [79098fc4] ↑ Rmath v0.8.0 ⇒ v0.9.0 [7e49a35a] ↑ RuntimeGeneratedFunctions v0.5.13 ⇒ v0.5.19 ⌅ [0bca4576] ↑ SciMLBase v2.64.0 ⇒ v2.155.1 ⌅ [a6db7da4] + SciMLLogging v1.10.1 [c0aeaf25] ↑ SciMLOperators v0.3.12 ⇒ v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] ↑ SciMLStructures v1.6.1 ⇒ v1.10.0 [7e506255] + ScopedValues v1.6.2 [6c6a2e73] ↑ Scratch v1.2.1 ⇒ v1.3.0 [efcf1570] ↑ Setfield v1.1.1 ⇒ v1.1.2 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [9f842d2f] ↑ SparseConnectivityTracer v0.6.9 ⇒ v1.2.1 [0a514795] ↑ SparseMatrixColorings v0.4.10 ⇒ v0.4.27 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.8.0 [aedffcd0] ↑ Static v1.1.1 ⇒ v1.4.0 [0d7ed370] ↑ StaticArrayInterface v1.8.0 ⇒ v1.10.0 [1e83bf80] ↑ StaticArraysCore v1.4.3 ⇒ v1.4.4 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.8.0 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.12 [4c63d2b9] ↑ StatsFuns v1.3.2 ⇒ v2.2.0 [2efcf032] ↑ SymbolicIndexingInterface v0.3.35 ⇒ v0.3.48 [3783bdb8] - TableTraits v1.0.1 [bd369af6] - Tables v1.12.0 [a759f4b9] - TimerOutputs v0.5.25 [e689c965] + Tracy v0.1.6 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] - UnPack v1.0.2 ⌅ [7cc45869] ↑ Enzyme_jll v0.0.165+0 ⇒ v0.0.269+0 [dad2f222] ↑ LLVMExtra_jll v0.0.34+0 ⇒ v0.0.43+1 [ad6e5548] + LibTracyClient_jll v0.13.1+0 [c8ffd9c3] - MbedTLS_jll v2.28.6+0 [079eb43e] ↑ NLopt_jll v2.8.0+0 ⇒ v2.11.0+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [8bf52ea8] + CRC32c v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [37e2e46d] ↑ LinearAlgebra v1.11.0 ⇒ v1.12.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.11.0 ⇒ v1.12.1 [3fa0cd96] + REPL v1.11.0 [2f01184e] ↑ SparseArrays v1.11.0 ⇒ v1.12.0 [f489334b] + StyledStrings v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.6.0+0 ⇒ v8.15.0+0 [e37daf67] ↑ LibGit2_jll v1.7.2+0 ⇒ v1.9.0+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.12.12 ⇒ v2025.11.4 [4536629a] ↑ OpenBLAS_jll v0.3.27+1 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] ↑ SuiteSparse_jll v7.7.0+0 ⇒ v7.8.3+2 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [8e850b90] ↑ libblastrampoline_jll v5.11.0+0 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.59.0+0 ⇒ v1.64.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_c4nrwc/Project.toml` [47edcb42] ADTypes v1.22.0 [4c88cf16] Aqua v0.8.16 [b0b7db55] ComponentArrays v0.15.39 [2569d6c7] ConcreteStructs v0.2.4 [31c24e10] Distributions v0.25.127 [7da242da] Enzyme v0.13.162 [6a86dc24] FiniteDiff v2.31.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [c3a54625] JET v0.11.4 ⌅ [033835bb] JLD2 v0.5.15 [610349f3] LaplacianExpectationMaximization v0.1.0 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [76087f3c] NLopt v1.2.1 [3bd65402] Optimisers v0.4.7 ⌅ [7f7a1694] Optimization v4.8.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_c4nrwc/Manifest.toml` [47edcb42] ADTypes v1.22.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.6.1 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.16 [4fba245c] ArrayInterface v7.25.0 [fa961155] CEnum v0.5.0 [d360d2e6] ChainRulesCore v1.26.1 [da1fd8a2] CodeTracking v3.0.2 [38540f10] CommonSolve v0.2.7 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [b0b7db55] ComponentArrays v0.15.39 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.4 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.5 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [a0c0ee7d] DifferentiationInterface v0.7.18 [31c24e10] Distributions v0.25.127 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [7da242da] Enzyme v0.13.162 [f151be2c] EnzymeCore v0.8.20 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [9aa1b823] FastClosures v0.3.2 [5789e2e9] FileIO v1.19.0 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.31.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v1.9.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.22.1 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.11.4 ⌅ [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.8.0 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.12 [70703baa] JuliaSyntax v1.0.2 [5be7bae1] LBFGSB v0.4.1 [929cbde3] LLVM v9.9.0 [610349f3] LaplacianExpectationMaximization v0.1.0 ⌅ [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌃ [d3d80556] LineSearches v7.5.1 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [6f1432cf] LoweredCodeUtils v3.5.3 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.8 ⌅ [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.4 [d8793406] ObjectFile v0.5.0 ⌅ [429524aa] Optim v1.13.3 [3bd65402] Optimisers v0.4.7 ⌅ [7f7a1694] Optimization v4.8.0 ⌅ [bca83a33] OptimizationBase v2.14.0 [65fa8838] OptimizationCallbacks v0.1.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.37 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v1.2.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [295af30f] Revise v3.15.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.19 ⌅ [0bca4576] SciMLBase v2.155.1 ⌅ [a6db7da4] SciMLLogging v1.10.1 [c0aeaf25] SciMLOperators v1.22.0 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [7e506255] ScopedValues v1.6.2 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [9f842d2f] SparseConnectivityTracer v1.2.1 [0a514795] SparseMatrixColorings v0.4.27 [276daf66] SpecialFunctions v2.8.0 [aedffcd0] Static v1.4.0 [0d7ed370] StaticArrayInterface v1.10.0 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [53d494c1] StructIO v0.3.1 [2efcf032] SymbolicIndexingInterface v0.3.48 [5d786b92] TerminalLoggers v0.1.7 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 ⌅ [7cc45869] Enzyme_jll v0.0.269+0 [dad2f222] LLVMExtra_jll v0.0.43+1 [81d17ec3] L_BFGS_B_jll v3.0.1+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [079eb43e] NLopt_jll v2.11.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 42032.1 ms ✓ SciMLBase 4059.1 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 7721.1 ms ✓ OptimizationBase 9782.4 ms ✓ Optimization 4 dependencies successfully precompiled in 65 seconds. 104 already precompiled. 57 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, Adapt, Adapt → AdaptSparseArraysExt, ArgTools, ArrayInterface, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CompilerSupportLibraries_jll, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, Distributed, DocStringExtensions, Downloads, EnumX, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, JLLWrappers, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, MacroTools, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, PDMats, Pkg, PrecompileTools, Preferences, Printf, Reexport, SciMLPublic, Serialization, SparseArrays, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StyledStrings, SuiteSparse, SuiteSparse_jll, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 37 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 1295.6 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 1 dependency successfully precompiled in 2 seconds. 21 already precompiled. 20 dependencies precompiled but different versions are currently loaded (CompilerSupportLibraries_jll, Dates, DocStringExtensions, HypergeometricFunctions, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, JLLWrappers, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, OpenLibm_jll, OpenSpecFun_jll, Preferences, Printf, Reexport, Rmath, Rmath_jll, SpecialFunctions, StatsFuns and TOML). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 2081.6 ms ✓ ComponentArrays → ComponentArraysRecursiveArrayToolsExt 1 dependency successfully precompiled in 3 seconds. 40 already precompiled. 39 dependencies precompiled but different versions are currently loaded (Accessors, Accessors → LinearAlgebraExt, Adapt, ArrayInterface, ArrayInterface → ArrayInterfaceChainRulesCoreExt, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, ChainRulesCore, CommonWorldInvalidations, Compat, Compat → CompatLinearAlgebraExt, ComponentArrays, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, DocStringExtensions, ExprTools, Functors, GPUArraysCore, IfElse, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, MacroTools, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RuntimeGeneratedFunctions, SciMLPublic, Serialization, Static, StaticArrayInterface, StaticArraysCore, SymbolicIndexingInterface, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 4606.8 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 4068.5 ms ✓ ComponentArrays → ComponentArraysSciMLBaseExt 2 dependencies successfully precompiled in 9 seconds. 70 already precompiled. 69 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesChainRulesCoreExt, ADTypes → ADTypesConstructionBaseExt, Accessors, Accessors → LinearAlgebraExt, Adapt, ArrayInterface, ArrayInterface → ArrayInterfaceChainRulesCoreExt, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, ChainRulesCore, CommonSolve, CommonWorldInvalidations, Compat, Compat → CompatLinearAlgebraExt, ComponentArrays, ComponentArrays → ComponentArraysRecursiveArrayToolsExt, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, Distributed, DocStringExtensions, EnumX, ExprTools, ExproniconLite, FunctionWrappers, FunctionWrappersWrappers, Functors, GPUArraysCore, IfElse, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IteratorInterfaceExtensions, Jieko, JuliaSyntaxHighlighting, Logging, LoggingExtras, MacroTools, Markdown, Moshi, PreallocationTools, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, Static, StaticArrayInterface, StaticArraysCore, Statistics, StyledStrings, SymbolicIndexingInterface, TOML, TruncatedStacktraces and UUIDs). Restart julia to access the new versions. Otherwise, 2 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 6962.2 ms ✓ SciMLBase → SciMLBaseDistributionsExt 1 dependency successfully precompiled in 9 seconds. 95 already precompiled. 94 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, AliasTables, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CommonSolve, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, DataAPI, DataStructures, Dates, Distributed, Distributions, DocStringExtensions, EnumX, ExprTools, ExproniconLite, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, HypergeometricFunctions, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Missings, Moshi, OpenLibm_jll, OpenSpecFun_jll, OrderedCollections, PDMats, PDMats → StatsBaseExt, PreallocationTools, PrecompileTools, Preferences, Printf, PtrArrays, QuadGK, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, Rmath, Rmath_jll, RuntimeGeneratedFunctions, SciMLBase, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, SortingAlgorithms, SparseArrays, SpecialFunctions, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, StatsFuns → StatsFunsInverseFunctionsExt, StyledStrings, SuiteSparse, SuiteSparse_jll, SymbolicIndexingInterface, TOML and TruncatedStacktraces). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 9899.0 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 1 dependency successfully precompiled in 11 seconds. 72 already precompiled. 71 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, Accessors, Accessors → LinearAlgebraExt, Adapt, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CommonSolve, CommonSubexpressions, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, DiffResults, DiffRules, Distributed, DocStringExtensions, EnumX, ExprTools, ExproniconLite, ForwardDiff, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Moshi, NaNMath, OpenLibm_jll, OpenSpecFun_jll, PreallocationTools, PreallocationTools → PreallocationToolsForwardDiffExt, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, SpecialFunctions, StaticArraysCore, Statistics, StyledStrings, SymbolicIndexingInterface, TOML and TruncatedStacktraces). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 4204.3 ms ✓ Distributions → DistributionsSparseConnectivityTracerExt 1 dependency successfully precompiled in 6 seconds. 45 already precompiled. 42 dependencies precompiled but different versions are currently loaded (ADTypes, AliasTables, CompilerSupportLibraries_jll, DataAPI, DataStructures, Dates, Distributions, DocStringExtensions, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, HypergeometricFunctions, IrrationalConstants, JLLWrappers, LogExpFunctions, Missings, OpenLibm_jll, OpenSpecFun_jll, OrderedCollections, PDMats, PDMats → StatsBaseExt, Preferences, Printf, PtrArrays, QuadGK, Reexport, Rmath, Rmath_jll, Serialization, SortingAlgorithms, SparseArrays, SparseConnectivityTracer, SpecialFunctions, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, SuiteSparse, SuiteSparse_jll and TOML). Restart julia to access the new versions. Otherwise, 3 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 1710.8 ms ✓ SparseConnectivityTracer → SparseConnectivityTracerChainRulesCoreExt 1 dependency successfully precompiled in 2 seconds. 18 already precompiled. 17 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesChainRulesCoreExt, ChainRulesCore, ChainRulesCore → ChainRulesCoreSparseArraysExt, Compat, Compat → CompatLinearAlgebraExt, Dates, DocStringExtensions, FillArrays, FillArrays → FillArraysSparseArraysExt, Printf, Serialization, SparseArrays, SparseConnectivityTracer, SuiteSparse_jll, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 13965.4 ms ✓ LaplacianExpectationMaximization → OptimizationExt 1 dependency successfully precompiled in 18 seconds. 190 already precompiled. 186 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesChainRulesCoreExt, ADTypes → ADTypesConstructionBaseExt, AbstractTrees, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, AliasTables, ArgTools, ArrayInterface, ArrayInterface → ArrayInterfaceChainRulesCoreExt, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, ChainRulesCore, ChainRulesCore → ChainRulesCoreSparseArraysExt, CommonSolve, CommonSubexpressions, CommonWorldInvalidations, Compat, Compat → CompatLinearAlgebraExt, CompilerSupportLibraries_jll, ComponentArrays, ComponentArrays → ComponentArraysOptimisersExt, ComponentArrays → ComponentArraysRecursiveArrayToolsExt, ComponentArrays → ComponentArraysSciMLBaseExt, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConcreteStructs, ConsoleProgressMonitor, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, DataAPI, DataStructures, Dates, DiffResults, DiffRules, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt, DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt, DifferentiationInterface → DifferentiationInterfaceForwardDiffExt, DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, DifferentiationInterface → DifferentiationInterfaceSparseConnectivityTracerExt, DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt, Distributed, Distributions, Distributions → DistributionsChainRulesCoreExt, Distributions → DistributionsSparseConnectivityTracerExt, DocStringExtensions, Downloads, EnumX, ExprTools, ExproniconLite, FastClosures, FileIO, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, FiniteDiff, FiniteDiff → FiniteDiffSparseArraysExt, ForwardDiff, FunctionWrappers, FunctionWrappersWrappers, Functors, GPUArraysCore, HypergeometricFunctions, IfElse, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLD2, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LBFGSB, L_BFGS_B_jll, LaplacianExpectationMaximization, LeftChildRightSiblingTrees, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, LineSearches, LogExpFunctions, LogExpFunctions → LogExpFunctionsChainRulesCoreExt, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Missings, Mmap, Moshi, MozillaCACerts_jll, NLSolversBase, NaNMath, NetworkOptions, OpenLibm_jll, OpenSSL_jll, OpenSpecFun_jll, Optim, Optimisers, Optimisers → OptimisersAdaptExt, Optimization, OptimizationBase, OptimizationBase → OptimizationFiniteDiffExt, OptimizationBase → OptimizationForwardDiffExt, OptimizationCallbacks, OrderedCollections, PDMats, PDMats → StatsBaseExt, Pkg, PositiveFactorizations, PreallocationTools, PreallocationTools → PreallocationToolsForwardDiffExt, PreallocationTools → PreallocationToolsSparseConnectivityTracerExt, PrecompileTools, Preferences, Printf, ProgressLogging, ProgressMeter, PtrArrays, QuadGK, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, Requires, Rmath, Rmath_jll, RuntimeGeneratedFunctions, SciMLBase, SciMLBase → SciMLBaseChainRulesCoreExt, SciMLBase → SciMLBaseDifferentiationInterfaceExt, SciMLBase → SciMLBaseDistributionsExt, SciMLBase → SciMLBaseForwardDiffExt, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, ScopedValues, Serialization, SortingAlgorithms, SparseArrays, SparseConnectivityTracer, SparseConnectivityTracer → SparseConnectivityTracerChainRulesCoreExt, SparseConnectivityTracer → SparseConnectivityTracerLogExpFunctionsExt, SparseConnectivityTracer → SparseConnectivityTracerNaNMathExt, SparseConnectivityTracer → SparseConnectivityTracerSpecialFunctionsExt, SparseMatrixColorings, SpecialFunctions, SpecialFunctions → SpecialFunctionsChainRulesCoreExt, Static, StaticArrayInterface, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, StatsFuns → StatsFunsChainRulesCoreExt, StatsFuns → StatsFunsInverseFunctionsExt, StyledStrings, SuiteSparse, SuiteSparse_jll, SymbolicIndexingInterface, TOML, Tar, TerminalLoggers, TranscodingStreams, TruncatedStacktraces, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 2 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 40301.2 ms ✓ OptimizationOptimJL 1 dependency successfully precompiled in 42 seconds. 149 already precompiled. 146 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, AbstractTrees, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, AliasTables, ArgTools, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CommonSolve, CommonSubexpressions, Compat, Compat → CompatLinearAlgebraExt, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConsoleProgressMonitor, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, DataAPI, DataStructures, Dates, DiffResults, DiffRules, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt, DifferentiationInterface → DifferentiationInterfaceForwardDiffExt, DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, DifferentiationInterface → DifferentiationInterfaceSparseConnectivityTracerExt, DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt, Distributed, DocStringExtensions, Downloads, EnumX, ExprTools, ExproniconLite, FastClosures, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, FiniteDiff, FiniteDiff → FiniteDiffSparseArraysExt, ForwardDiff, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LBFGSB, L_BFGS_B_jll, LeftChildRightSiblingTrees, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, LineSearches, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Missings, Moshi, MozillaCACerts_jll, NLSolversBase, NaNMath, NetworkOptions, OpenLibm_jll, OpenSSL_jll, OpenSpecFun_jll, Optim, Optimization, OptimizationBase, OptimizationBase → OptimizationFiniteDiffExt, OptimizationBase → OptimizationForwardDiffExt, OrderedCollections, PDMats, PDMats → StatsBaseExt, Pkg, PositiveFactorizations, PreallocationTools, PreallocationTools → PreallocationToolsForwardDiffExt, PreallocationTools → PreallocationToolsSparseConnectivityTracerExt, PrecompileTools, Preferences, Printf, ProgressLogging, ProgressMeter, PtrArrays, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLBase → SciMLBaseDifferentiationInterfaceExt, SciMLBase → SciMLBaseForwardDiffExt, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, SortingAlgorithms, SparseArrays, SparseConnectivityTracer, SparseConnectivityTracer → SparseConnectivityTracerLogExpFunctionsExt, SparseConnectivityTracer → SparseConnectivityTracerNaNMathExt, SparseConnectivityTracer → SparseConnectivityTracerSpecialFunctionsExt, SparseMatrixColorings, SpecialFunctions, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StyledStrings, SuiteSparse, SuiteSparse_jll, SymbolicIndexingInterface, TOML, Tar, TerminalLoggers, TruncatedStacktraces, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 2 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 30725.0 ms ✓ QuadGK → QuadGKEnzymeExt 1 dependency successfully precompiled in 31 seconds. 51 already precompiled. 49 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, CEnum, CompilerSupportLibraries_jll, DataStructures, Dates, Downloads, Enzyme, EnzymeCore, Enzyme_jll, ExprTools, GPUCompiler, InteractiveUtils, JLLWrappers, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenSSL_jll, OrderedCollections, Pkg, PrecompileTools, Preferences, Printf, QuadGK, Reexport, Scratch, Serialization, SparseArrays, StructIO, StyledStrings, SuiteSparse_jll, TOML, Tar, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 3 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 2125.4 ms ✓ SciMLLogging → SciMLLoggingTracyExt 34274.3 ms ✓ Enzyme → EnzymeGPUArraysCoreExt 30803.1 ms ✓ FunctionWrappersWrappers → FunctionWrappersWrappersEnzymeExt 35242.1 ms ✓ SciMLBase → SciMLBaseEnzymeExt 4 dependencies successfully precompiled in 103 seconds. 98 already precompiled. 96 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, ADTypes → ADTypesEnzymeCoreExt, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, ArgTools, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CEnum, CommonSolve, CommonSolve → CommonSolveEnzymeCoreExt, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, Distributed, DocStringExtensions, Downloads, EnumX, Enzyme, EnzymeCore, EnzymeCore → AdaptExt, Enzyme_jll, ExprTools, ExproniconLite, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, GPUCompiler, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, LoggingExtras, MacroTools, Markdown, Moshi, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenSSL_jll, Pkg, PreallocationTools, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Scratch, Serialization, SparseArrays, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StructIO, StyledStrings, SuiteSparse_jll, SymbolicIndexingInterface, TOML, Tar, TruncatedStacktraces, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 6 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 30751.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceEnzymeExt 36424.1 ms ✓ OptimizationBase → OptimizationEnzymeExt 2 dependencies successfully precompiled in 68 seconds. 119 already precompiled. 114 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, ADTypes → ADTypesEnzymeCoreExt, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, ArgTools, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CEnum, CommonSolve, CommonSolve → CommonSolveEnzymeCoreExt, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, DifferentiationInterface → DifferentiationInterfaceSparseConnectivityTracerExt, DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt, Distributed, DocStringExtensions, Downloads, EnumX, Enzyme, EnzymeCore, EnzymeCore → AdaptExt, Enzyme_jll, ExprTools, ExproniconLite, FastClosures, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, GPUCompiler, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, LoggingExtras, MacroTools, Markdown, Moshi, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenSSL_jll, OptimizationBase, PDMats, Pkg, PreallocationTools, PreallocationTools → PreallocationToolsSparseConnectivityTracerExt, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLBase → SciMLBaseDifferentiationInterfaceExt, SciMLBase → SciMLBaseEnzymeExt, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Scratch, Serialization, SparseArrays, SparseConnectivityTracer, SparseMatrixColorings, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StructIO, StyledStrings, SuiteSparse, SuiteSparse_jll, SymbolicIndexingInterface, TOML, Tar, TruncatedStacktraces, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 7 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 30125.4 ms ✓ Enzyme → EnzymeLogExpFunctionsExt 1 dependency successfully precompiled in 31 seconds. 51 already precompiled. 49 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, CEnum, CompilerSupportLibraries_jll, Dates, DocStringExtensions, Downloads, Enzyme, EnzymeCore, Enzyme_jll, ExprTools, GPUCompiler, InteractiveUtils, IrrationalConstants, JLLWrappers, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, LogExpFunctions, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenSSL_jll, Pkg, PrecompileTools, Preferences, Printf, Reexport, Scratch, Serialization, SparseArrays, StructIO, StyledStrings, SuiteSparse_jll, TOML, Tar, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 3 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 32561.9 ms ✓ Enzyme → EnzymeChainRulesCoreExt 1 dependency successfully precompiled in 33 seconds. 53 already precompiled. 51 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, CEnum, ChainRulesCore, ChainRulesCore → ChainRulesCoreSparseArraysExt, Compat, Compat → CompatLinearAlgebraExt, CompilerSupportLibraries_jll, Dates, Downloads, Enzyme, EnzymeCore, EnzymeCore → EnzymeCoreChainRulesCoreExt, Enzyme_jll, ExprTools, GPUCompiler, InteractiveUtils, JLLWrappers, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenSSL_jll, Pkg, PrecompileTools, Preferences, Printf, Reexport, Scratch, Serialization, SparseArrays, StructIO, StyledStrings, SuiteSparse_jll, TOML, Tar, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 3 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 32601.0 ms ✓ Enzyme → EnzymeSpecialFunctionsExt 1 dependency successfully precompiled in 33 seconds. 55 already precompiled. 53 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, CEnum, CompilerSupportLibraries_jll, Dates, DocStringExtensions, Downloads, Enzyme, Enzyme → EnzymeLogExpFunctionsExt, EnzymeCore, Enzyme_jll, ExprTools, GPUCompiler, InteractiveUtils, IrrationalConstants, JLLWrappers, JuliaSyntaxHighlighting, LLVM, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, LogExpFunctions, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, ObjectFile, OpenLibm_jll, OpenSSL_jll, OpenSpecFun_jll, Pkg, PrecompileTools, Preferences, Printf, Reexport, Scratch, Serialization, SparseArrays, SpecialFunctions, StructIO, StyledStrings, SuiteSparse_jll, TOML, Tar, UUIDs, Unicode, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 3 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 5284.0 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 7 seconds. 48 already precompiled. 48 dependencies precompiled but different versions are currently loaded (AliasTables, Base64, CompilerSupportLibraries_jll, DataAPI, DataStructures, Dates, Distributions, DocStringExtensions, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, HypergeometricFunctions, InteractiveUtils, IrrationalConstants, JLLWrappers, JuliaSyntaxHighlighting, LogExpFunctions, Logging, Markdown, Missings, OpenLibm_jll, OpenSpecFun_jll, OrderedCollections, PDMats, PDMats → StatsBaseExt, Preferences, Printf, PtrArrays, QuadGK, Reexport, Rmath, Rmath_jll, Serialization, SortingAlgorithms, SparseArrays, SpecialFunctions, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, StyledStrings, SuiteSparse, SuiteSparse_jll, TOML, Test and Unicode). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Test Summary: | Pass Total Time GaussianModel | 3 3 4.4s Test Summary: | Pass Total Time BiasedCoin | 3 3 2.4s Test Summary: | Pass Total Time HabituatingBiasedCoin | 3 3 1.1s Test Summary: | Pass Total Time MarkovChain | 1 1 4.1s Test Summary: | Pass Total Time HabituatingMarkovChain | 1 1 3.4s Test Summary: | Pass Total Time gradlogp & hesslogp | 14 14 5m29.2s Test Summary: | Pass Broken Total Time ForwardDiff & Enzyme | 1 1 2 3.8s Test Summary: | Pass Total Time NormalPrior | 1 1 1.6s Test Summary: | Pass Total Time copy_elements | 5 5 5.7s Test Summary: | Pass Total Time distribute_shared | 4 4 10.3s Test Summary: | Pass Total Time drop | 8 8 5.8s Test Summary: | Pass Total Time fix | 34 34 1m00.6s ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#HessLogP##0#HessLogP##1"{Vector{Bool}, PopulationModel{}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#GradLogP##0#GradLogP##1"{Vector{Bool}, PopulationModel{}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#38#39"{Vector{Bool}, PopulationModel{}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#32#33"{Base.Pairs{Symbol, Union{}, Nothing, @NamedTuple{}}, Vector{Vector{Bool}}, PopulationModel{}}. │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#63#64". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store LaplacianExpectationMaximization.var"#63#64". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 ┌ Warning: Attempting to store OptimizationCallbacks.var"#Callback##0#Callback##1". │ JLD2 only stores functions by name. │ This may not be useful for anonymous functions. └ @ JLD2 ~/.julia/packages/JLD2/SgtOb/src/data/writing_datatypes.jl:447 eval | current | lowest | highest _________________________________________________ 2 | -1867.16 | -1867.16 | -1867.16 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 179 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm9LiveRange15isLiveAtIndexesENS_8ArrayRefINS_9SlotIndexEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14VirtRegAuxInfo16weightCalcHelperERNS_12LiveIntervalEPNS_9SlotIndexES4_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14VirtRegAuxInfo27calculateSpillWeightAndHintERNS_12LiveIntervalE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13LiveRangeEdit24calculateRegClassAndHintERNS_15MachineFunctionERNS_14VirtRegAuxInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy17selectOrSplitImplERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEERNS_8SmallSetIS5_Lj16ESt4lessIS5_EEERNS_11SmallVectorISt4pairIPS2_NS_10MCRegisterEELj8EEEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy13selectOrSplitERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12RegAllocBase16allocatePhysRegsEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3528 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 read_scalar at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/io/dataio.jl:107 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:96 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:84 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:67 [inlined] read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:67 [inlined] read_attr_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/attributes.jl:91 [inlined] #jltype##0 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/data/reconstructing_datatypes.jl:102 with at ./scopedvalues.jl:269 jltype at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/data/reconstructing_datatypes.jl:101 load_datatypes at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:329 prewrite at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:343 [inlined] #write#105 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:60 write at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:58 [inlined] write at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:58 [inlined] setindex! at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/groups.jl:103 [inlined] setindex! at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:349 [inlined] #10 at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:316 unknown function (ip: 0x7e54921a66ea) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #jldopen#72 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/loadsave.jl:4 jldopen at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/loadsave.jl:1 [inlined] CheckPointSaver at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:315 [inlined] Callback at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:77 unknown function (ip: 0x7e549214a9c2) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 OptimizationTracker at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:33 SwapSign at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:298 #make_fdf##4 at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/objective_types/incomplete.jl:55 unknown function (ip: 0x7e54922bfe11) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 value_gradient!! at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:82 value_gradient! at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:69 unknown function (ip: 0x7e54922abd44) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 value_gradient! at /home/pkgeval/.julia/packages/Optim/gmigl/src/Manifolds.jl:50 ϕdϕ at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/LineSearches.jl:32 secant2! at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:376 HagerZhang at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:277 HagerZhang at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:103 [inlined] perform_linesearch! at /home/pkgeval/.julia/packages/Optim/gmigl/src/utilities/perform_linesearch.jl:58 update_state! at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/solvers/first_order/l_bfgs.jl:220 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/optimize.jl:65 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/optimize.jl:43 [inlined] #optimize#67 at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/interface.jl:274 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/interface.jl:264 [inlined] maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:305 [inlined] maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:370 maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:508 unknown function (ip: 0x7e54922a8b7c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #maximize_logp#61 at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:463 maximize_logp at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:426 maximize_logp at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:426 unknown function (ip: 0x7e549225b0bb) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e54c86fa249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 jfptr_wait_70429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2556 unknown function (ip: 0x7e44f6780ab3) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2496 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2311 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2164 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2278 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7e44f67787dc) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2225 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2215 unknown function (ip: 0x7e44f676cfa1) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2481 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] #test#174 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:529 unknown function (ip: 0x7e44f676c501) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7e44f6769ab0) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7e44f676156f) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e4512b8c249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e44f83fc010 Total snapshots: 311. Utilization: 0% ╎311 @Base/client.jl:550 _start() ╎ 311 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 311 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 311 @Base/loading.jl:2933 _include(mapexpr::Function, mod::Module, _pat… ╎ 311 @Base/loading.jl:2873 include_string(mapexpr::typeof(identity), mo… ╎ 311 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 311 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 311 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 311 @Pkg/src/API.jl:157 test ╎ ╎ 311 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 311 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 311 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 311 @Pkg/src/API.jl:529 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 311 @Pkg/src/API.jl:552 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 311 @Pkg/…erations.jl:2387 test ╎ ╎ ╎ 311 @Pkg/…erations.jl:2481 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 311 @Pkg/…rations.jl:2215 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 311 @Pkg/…rations.jl:2225 #sandbox#182 ╎ ╎ ╎ ╎ 311 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 311 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 311 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 311 @Pkg/…tions.jl:2278 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 311 @Pkg/…tions.jl:2164 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 311 @Pkg/…tions.jl:2311 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 311 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 311 @Pkg/…ions.jl:2496 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 311 @Pkg/…ons.jl:2556 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…ss.jl:693 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…sk.jl:1228 wait() 310╎ ╎ ╎ ╎ ╎ ╎ ╎ 311 @Base/…sk.jl:1216 poptask(W::Base.Intr… [179] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/test/fit.jl:121 _ZNK4llvm9LiveRange15isLiveAtIndexesENS_8ArrayRefINS_9SlotIndexEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14VirtRegAuxInfo16weightCalcHelperERNS_12LiveIntervalEPNS_9SlotIndexES4_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14VirtRegAuxInfo27calculateSpillWeightAndHintERNS_12LiveIntervalE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13LiveRangeEdit24calculateRegClassAndHintERNS_15MachineFunctionERNS_14VirtRegAuxInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy17selectOrSplitImplERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEERNS_8SmallSetIS5_Lj16ESt4lessIS5_EEERNS_11SmallVectorISt4pairIPS2_NS_10MCRegisterEELj8EEEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy13selectOrSplitERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12RegAllocBase16allocatePhysRegsEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm8RAGreedy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3528 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 read_scalar at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/io/dataio.jl:107 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:96 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:84 read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:67 [inlined] read_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/datasets.jl:67 [inlined] read_attr_data at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/attributes.jl:91 [inlined] #jltype##0 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/data/reconstructing_datatypes.jl:102 with at ./scopedvalues.jl:269 jltype at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/data/reconstructing_datatypes.jl:101 load_datatypes at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:329 prewrite at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:343 [inlined] #write#105 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:60 write at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:58 [inlined] write at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/compression.jl:58 [inlined] setindex! at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/groups.jl:103 [inlined] setindex! at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/JLD2.jl:349 [inlined] #10 at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:316 unknown function (ip: 0x7e54921a66ea) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #jldopen#72 at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/loadsave.jl:4 jldopen at /home/pkgeval/.julia/packages/JLD2/SgtOb/src/loadsave.jl:1 [inlined] CheckPointSaver at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:315 [inlined] Callback at /home/pkgeval/.julia/packages/OptimizationCallbacks/4yegF/src/OptimizationCallbacks.jl:77 unknown function (ip: 0x7e549214a9c2) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 OptimizationTracker at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:33 SwapSign at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:298 #make_fdf##4 at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/objective_types/incomplete.jl:55 unknown function (ip: 0x7e54922bfe11) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 value_gradient!! at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:82 value_gradient! at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:69 unknown function (ip: 0x7e54922abd44) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 value_gradient! at /home/pkgeval/.julia/packages/Optim/gmigl/src/Manifolds.jl:50 ϕdϕ at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/LineSearches.jl:32 secant2! at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:376 HagerZhang at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:277 HagerZhang at /home/pkgeval/.julia/packages/LineSearches/2BCHN/src/hagerzhang.jl:103 [inlined] perform_linesearch! at /home/pkgeval/.julia/packages/Optim/gmigl/src/utilities/perform_linesearch.jl:58 update_state! at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/solvers/first_order/l_bfgs.jl:220 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/optimize.jl:65 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/optimize.jl:43 [inlined] #optimize#67 at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/interface.jl:274 optimize at /home/pkgeval/.julia/packages/Optim/gmigl/src/multivariate/optimize/interface.jl:264 [inlined] maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:305 [inlined] maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:370 maximize at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:508 unknown function (ip: 0x7e54922a8b7c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #maximize_logp#61 at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:463 maximize_logp at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:426 maximize_logp at /home/pkgeval/.julia/packages/LaplacianExpectationMaximization/as2MD/src/fit.jl:426 unknown function (ip: 0x7e549225b0bb) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e54c86fa249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 329829741 (Pool: 329825928; Big: 3813); GC: 131 PkgEval terminated after 2722.39s: test duration exceeded the time limit