Package evaluation to test GNNlib on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T19:26:25.622 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.42s ################################################################################ # Installation # Installing GNNlib... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [a6a84749] + GNNlib v1.2.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [a9b6321e] + Atomix v1.1.3 [d360d2e6] + ChainRulesCore v1.26.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [d9f16b24] + Functors v0.5.2 [aed8fd31] + GNNGraphs v1.5.0 [a6a84749] + GNNlib v1.2.1 [46192b85] + GPUArraysCore v0.2.0 [86223c79] + Graphs v1.14.0 [076d061b] + HashArrayMappedTries v0.2.0 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [63c18a36] + KernelAbstractions v0.9.41 ⌅ [0b1a1467] + KrylovKit v0.9.5 [2ab3a3ac] + LogExpFunctions v1.0.1 [c2834f40] + MLCore v1.0.2 [7e8f7934] + MLDataDevices v1.17.10 [f1d291b0] + MLUtils v0.4.9 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.36 [b8a86587] + NearestNeighbors v0.4.27 ⌅ [bac558e1] + OrderedCollections v1.8.2 [65ce6f38] + PackageExtensionCompat v1.0.2 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [ae029012] + Requires v1.3.1 [431bcebd] + SciMLPublic v1.0.1 [7e506255] + ScopedValues v1.6.2 [605ecd9f] + ShowCases v0.1.0 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [013be700] + UnsafeAtomics v0.3.1 ⌅ [409d34a3] + VectorInterface v0.5.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.04s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:78 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ expected package `GNNGraphs [aed8fd31]` to exist at path `/home/pkgeval/.julia/packages/GNNlib/GNNGraphs` │ Stacktrace: │ [1] pkgerror(msg::String) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 │ [2] collect_fixed!(env::Pkg.Types.EnvCache, pkgs::Vector{PackageSpec}, names::Dict{UUID, String}, julia_version::VersionNumber) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:449 │ [3] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:528 │ [4] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2000 │ [5] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1977 [inlined] │ [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, workspace::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:450 │ [7] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:419 [inlined] │ [8] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:174 [inlined] │ [9] #resolve#171 │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:456 [inlined] │ [10] resolve │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:455 [inlined] │ [11] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:83 │ [12] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:9 │ [13] (::var"#10#11")() │ @ Main /PkgEval.jl/scripts/precompile.jl:21 │ [14] capture_pkg_output(f::var"#10#11"; suppress::Bool) │ @ Main /PkgEval.jl/scripts/common.jl:55 │ [15] suppress_pkg_output(f::Function) │ @ Main /PkgEval.jl/scripts/common.jl:35 │ [16] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:19 │ [17] include(mod::Module, _path::String) │ @ Base ./Base.jl:306 │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:317 │ [19] _start() │ @ Base ./client.jl:550 └ @ Main /PkgEval.jl/scripts/precompile.jl:24 Activating project at `~/.julia/environments/v1.12` Precompiling package dependencies... Precompiling packages... 1654.4 ms ✓ KrylovKit → KrylovKitChainRulesCoreExt 51217.3 ms ✓ GNNGraphs 9230.9 ms ✓ GNNlib 3 dependencies successfully precompiled in 64 seconds. 84 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 36 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 77.17s ################################################################################ # Testing # Testing GNNlib Testing failed after 5.38s ERROR: LoadError: expected package `GNNGraphs [aed8fd31]` to exist at path `/home/pkgeval/.julia/packages/GNNlib/GNNGraphs` Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] collect_fixed!(env::Pkg.Types.EnvCache, pkgs::Vector{PackageSpec}, names::Dict{UUID, String}, julia_version::VersionNumber) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:449 [3] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:528 [4] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2000 [5] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1977 [inlined] [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, workspace::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:450 [7] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:419 [inlined] [8] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:174 [inlined] [9] #resolve#171 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:456 [inlined] [10] resolve @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:455 [inlined] [11] (::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2294 [12] with_temp_env(fn::Pkg.Operations.var"#190#191"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2164 [13] (::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2278 [14] mktempdir(fn::Pkg.Operations.var"#186#187"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#205#206"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:936 [15] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:932 [16] #sandbox#182 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2225 [inlined] [17] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2481 [18] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 [20] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [21] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [22] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [23] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [24] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [25] include(mod::Module, _path::String) @ Base ./Base.jl:306 [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [27] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 117.14s: there were unidentified errors