Package evaluation to test FixedEffects on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T13:58:33.474 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.94s ################################################################################ # Installation # Installing FixedEffects... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [c8885935] + FixedEffects v3.3.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [ffbed154] + DocStringExtensions v0.9.5 [c8885935] + FixedEffects v3.3.0 [6407cd72] + GroupedArrays v0.3.5 [92d709cd] + IrrationalConstants v0.2.6 [2ab3a3ac] + LogExpFunctions v1.0.1 [e1d29d7a] + Missings v1.2.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.76s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 30150.6 ms ✓ FixedEffects 391435.2 ms ✓ FixedEffects → CUDAExt 98635.9 ms ✓ FixedEffects → MetalExt 3 dependencies successfully precompiled in 522 seconds. 127 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 63 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 551.17s ################################################################################ # Testing # Testing FixedEffects Status `/tmp/jl_yIBLBf/Project.toml` ⌃ [052768ef] CUDA v6.1.0 [324d7699] CategoricalArrays v1.1.1 [c8885935] FixedEffects v3.3.0 [6407cd72] GroupedArrays v0.3.5 [dde4c033] Metal v1.9.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [2913bbd2] StatsBase v0.34.12 [37e2e46d] LinearAlgebra v1.12.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_yIBLBf/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.6.1 [66dad0bd] AliasTables v1.1.3 [a9b6321e] Atomix v1.1.3 [ab4f0b2a] BFloat16s v0.6.1 [fa961155] CEnum v0.5.0 ⌃ [052768ef] CUDA v6.1.0 ⌅ [bd0ed864] CUDACore v6.1.1 ⌅ [9ec180c6] CUDATools v6.1.0 [1af6417a] CUDA_Runtime_Discovery v2.1.0 ⌅ [9e67e8f6] CUPTI v6.1.0 [324d7699] CategoricalArrays v1.1.1 [523fee87] CodecBzip2 v0.8.5 [34da2185] Compat v4.18.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [c8885935] FixedEffects v3.3.0 [0c68f7d7] GPUArrays v11.5.8 [46192b85] GPUArraysCore v0.2.0 ⌅ [61eb1bfa] GPUCompiler v1.15.2 [096a3bc2] GPUToolbox v1.1.1 [6407cd72] GroupedArrays v0.3.5 [076d061b] HashArrayMappedTries v0.2.0 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [63c18a36] KernelAbstractions v0.9.41 [929cbde3] LLVM v9.9.0 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v1.0.1 [1914dd2f] MacroTools v0.5.16 [dde4c033] Metal v1.9.3 [e1d29d7a] Missings v1.2.0 ⌅ [611af6d1] NVML v6.1.0 [5da4648a] NVTX v1.0.3 ⌅ [e86c9b32] ObjectiveC v3.4.2 ⌅ [bac558e1] OrderedCollections v1.8.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [43287f4e] PtrArrays v1.4.0 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e506255] ScopedValues v1.6.2 [6c6a2e73] Scratch v1.3.0 [a2af1166] SortingAlgorithms v1.2.2 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [892a3eda] StringManipulation v0.4.4 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.1 ⌅ [182d3088] cuBLAS v6.1.0 ⌅ [533571aa] cuFFT v6.1.0 ⌅ [20fd9a0b] cuRAND v6.1.0 ⌅ [887afef0] cuSOLVER v6.1.0 ⌅ [b26da814] cuSPARSE v6.1.0 [6e34b625] Bzip2_jll v1.0.9+0 [d1e2174e] CUDA_Compiler_jll v0.4.4+0 [4ee394cb] CUDA_Driver_jll v13.3.0+0 ⌅ [76a88914] CUDA_Runtime_jll v0.21.0+1 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 ⌅ [f52de702] LLVMDowngrader_jll v0.6.0+2 [dad2f222] LLVMExtra_jll v0.0.43+1 [ad6e5548] LibTracyClient_jll v0.13.1+0 [e98f9f5b] NVTX_jll v3.2.2+0 [1e29f10c] demumble_jll v1.3.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Running tests: Precompiling packages... 29354.3 ms ? CUDACore 103302.8 ms ✓ cuFFT 22858.5 ms ✓ cuSPARSE 26563.8 ms ✓ cuBLAS 17436.0 ms ✓ NVML 18997.7 ms ✓ CUPTI 16599.0 ms ✓ cuRAND 26473.1 ms ✓ cuSOLVER 44621.0 ms ✓ CUDATools 21756.8 ms ✓ CUDA 21549.6 ms ✓ Atomix → AtomixCUDAExt 10 dependencies successfully precompiled in 351 seconds. 90 already precompiled. 14 dependencies precompiled but different versions are currently loaded (Base64, DataAPI, InteractiveUtils, JuliaSyntaxHighlighting, Logging, Markdown, OrderedCollections, Printf, Serialization, SparseArrays, Statistics, Statistics → SparseArraysExt, StyledStrings and SuiteSparse_jll). Restart julia to access the new versions. Otherwise, 50 dependents of these packages may trigger further precompilation to work with the unexpected versions. 1 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ cuFFT │ ┌ Warning: 3-arg `link_libraries!(job, mod, undefined_fns)` is deprecated; migrate your override to the 2-arg form `link_libraries!(job, mod)`. Instead of inspecting `undefined_fns` to decide what to link, parse the library lazily with `parse(LLVM.Module, bytes; lazy=true)` and link it with `LLVM.link!(mod, lib; only_needed=true)` — the linker will then materialize only the referenced symbols. │ │ caller = ip:0x0 │ └ @ Core :-1 └ ┌ CUDACore │ WARNING: Method definition adapt_storage(Type{StaticArraysCore.SArray{S, T, N, L} where L where N where T where S<:Tuple}, Array{T, N} where N where T) in module AdaptStaticArraysExt at /home/pkgeval/.julia/packages/Adapt/LcM3J/ext/AdaptStaticArraysExt.jl:7 overwritten in module AdaptStaticArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompiling packages... 14813.9 ms ✓ ObjectiveC 4935.4 ms ✓ LLVMDowngrader_jll 55886.3 ms ✓ Metal 11189.8 ms ✓ Atomix → AtomixMetalExt 4 dependencies successfully precompiled in 87 seconds. 71 already precompiled. 62 dependencies precompiled but different versions are currently loaded (Adapt, Adapt → AdaptSparseArraysExt, Adapt → AdaptStaticArraysExt, ArgTools, Atomix, BFloat16s, Base64, CEnum, Dates, Downloads, ExprTools, GPUArrays, GPUArraysCore, GPUCompiler, GPUToolbox, InteractiveUtils, JLLWrappers, JuliaSyntaxHighlighting, KernelAbstractions, KernelAbstractions → LinearAlgebraExt, KernelAbstractions → SparseArraysExt, LLVM, LLVM → BFloat16sExt, LLVMExtra_jll, LazyArtifacts, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, MacroTools, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, PrecompileTools, Preferences, Printf, Random123, RandomNumbers, Reexport, Scratch, Serialization, SparseArrays, StaticArrays, StaticArrays → StaticArraysStatisticsExt, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StyledStrings, SuiteSparse_jll, TOML, Tar, UUIDs, Unicode, UnsafeAtomics, UnsafeAtomics → UnsafeAtomicsLLVM, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 10 dependents of these packages may trigger further precompilation to work with the unexpected versions. ┌ Error: Metal.jl is only supported on macOS └ @ Metal ~/.julia/packages/Metal/SVvf5/src/initialization.jl:32 Precompiling packages... 20173.2 ms ✓ GroupedArrays 13221.5 ms ✓ FixedEffects 2 dependencies successfully precompiled in 34 seconds. 23 already precompiled. 23 dependencies precompiled but different versions are currently loaded (AliasTables, DataAPI, DataStructures, Dates, DocStringExtensions, IrrationalConstants, LogExpFunctions, Missings, OrderedCollections, PrecompileTools, Preferences, Printf, PtrArrays, Serialization, SortingAlgorithms, SparseArrays, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, SuiteSparse_jll, TOML and Unicode). Restart julia to access the new versions. Otherwise, 2 dependents of these packages may trigger further precompilation to work with the unexpected versions. julia: /source/src/jltypes.c:1277: jl_cache_type_: Assertion `idx < 0' failed. [238] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/FixedEffects/99JME/test/runtests.jl:4 unknown function (ip: 0x77726df5cebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x77726def8394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_cache_type_ at /source/src/jltypes.c:1277 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4156 jl_restore_package_image_from_stream at /source/src/staticdata.c:4451 ijl_restore_incremental at /source/src/staticdata.c:4533 #_include_from_serialized#887 at ./loading.jl:1304 _include_from_serialized at ./loading.jl:1276 [inlined] #_require_search_from_serialized#903 at ./loading.jl:2103 _require_search_from_serialized at ./loading.jl:2010 [inlined] __require_prelocked at ./loading.jl:2628 _require_prelocked at ./loading.jl:2494 macro expansion at ./loading.jl:2422 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2387 jfptr___require_72496.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:900 require at ./loading.jl:2363 jfptr_require_35976.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 jl_toplevel_eval_flex at /source/src/toplevel.c:830 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x77726def9249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 14969639 (Pool: 14969263; Big: 376); GC: 27 Testing failed after 520.33s ERROR: LoadError: Package FixedEffects errored during testing (received signal: 6) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2538 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval crashed after 1103.12s: the process was aborted