Package evaluation to test FCSFiles on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T12:25:18.751 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.54s ################################################################################ # Installation # Installing FCSFiles... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [d76558cf] + FCSFiles v0.2.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [39de3d68] + AxisArrays v0.4.8 [d76558cf] + FCSFiles v0.2.1 [5789e2e9] + FileIO v1.19.0 [8197267c] + IntervalSets v0.7.14 [c8e1da08] + IterTools v1.10.0 [b3c3ace0] + RangeArrays v0.3.2 [ae029012] + Requires v1.3.1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [458c3c95] + OpenSSL_jll v3.5.6+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Installation completed after 5.59s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 4959.5 ms ✓ FCSFiles 1 dependency successfully precompiled in 5 seconds. 36 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 6 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 23.26s ################################################################################ # Testing # Testing FCSFiles Status `/tmp/jl_J231vO/Project.toml` [d76558cf] FCSFiles v0.2.1 [5789e2e9] FileIO v1.19.0 [56ddb016] Logging v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_J231vO/Manifest.toml` [39de3d68] AxisArrays v0.4.8 [d76558cf] FCSFiles v0.2.1 [5789e2e9] FileIO v1.19.0 [8197267c] IntervalSets v0.7.14 [c8e1da08] IterTools v1.10.0 [b3c3ace0] RangeArrays v0.3.2 [ae029012] Requires v1.3.1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [458c3c95] OpenSSL_jll v3.5.6+0 [83775a58] Zlib_jll v1.3.1+2 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Testing Running tests... Cloning into 'fcsexamples'... param access through `Base.getproperty`: Test Failed at /home/pkgeval/.julia/packages/FCSFiles/X3Hx3/test/runtests.jl:228 Expression: flowrun.notthere Expected: "no field notthere" Message: "FieldError: type FlowSample has no field `notthere`, available fields: `data`, `params`" Stacktrace: [1] top-level scope @ ~/.julia/packages/FCSFiles/X3Hx3/test/runtests.jl:20 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] [3] macro expansion @ ~/.julia/packages/FCSFiles/X3Hx3/test/runtests.jl:209 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] [5] macro expansion @ ~/.julia/packages/FCSFiles/X3Hx3/test/runtests.jl:228 [inlined] Test Summary: | Pass Fail Total Time FCSFiles test suite | 77 1 78 29.7s Loading of large FCS file | 2 2 5.5s FlowSample size and length | 2 2 0.1s FlowSample keys and haskey | 15 15 0.6s Channel access using String | 14 14 1.0s Multiple channel access using String | 13 13 1.3s Integer sample indexing as second dimension | 4 4 1.2s Mixed indexing with String and Integer | 4 4 1.4s Logical indexing in second dimension | 1 1 1.1s Convert to Matrix | 1 1 0.4s Regression for reading FCS files | 6 6 0.3s Iterating FlowSample | 1 1 4.5s Loading float-encoded file | 2 2 0.0s Loading Accuri file | 2 2 0.2s params throws deprecation warning | 1 1 0.9s data throws deprecation warning | 1 1 0.1s show doesn't throw deprecation warning | 1 1 1.6s `param_lookup` for different versions of the param | 1 1 0.3s param access through `Base.getproperty` | 1 1 2 8.9s property names give the names of the parameters | 3 3 0.2s Double delimited files | 2 2 0.0s RNG of the outermost testset: Random.Xoshiro(0x9c0e330edbea38c0, 0x17b5fb9849066abd, 0x0bcb4acf8830aa55, 0x4ea6a477794eba9c, 0x44b71b29b117e6e4) ERROR: LoadError: Some tests did not pass: 77 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/FCSFiles/X3Hx3/test/runtests.jl:18 Testing failed after 49.87s ERROR: LoadError: Package FCSFiles errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2538 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 103.43s: package has test failures