Package evaluation to test EnzymeRates on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T23:06:15.215 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.9s ################################################################################ # Installation # Installing EnzymeRates... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [e7a1c2d3] + EnzymeRates v0.1.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.1 [4fba245c] + ArrayInterface v7.25.0 [336ed68f] + CSV v0.10.16 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.7 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [a0c0ee7d] + DifferentiationInterface v0.7.18 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [e7a1c2d3] + EnzymeRates v0.1.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [9aa1b823] + FastClosures v0.3.2 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v1.9.1 [46192b85] + GPUArraysCore v0.2.0 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [ae98c720] + Jieko v0.2.1 [5be7bae1] + LBFGSB v0.4.1 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.8 ⌅ [7f7a1694] + Optimization v4.8.0 ⌅ [bca83a33] + OptimizationBase v2.14.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.6 [2dfb63ee] + PooledArrays v1.4.3 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.3.2 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [7e49a35a] + RuntimeGeneratedFunctions v0.5.19 ⌅ [0bca4576] + SciMLBase v2.155.1 ⌅ [a6db7da4] + SciMLLogging v1.10.1 [c0aeaf25] + SciMLOperators v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [91c51154] + SentinelArrays v1.4.10 [a2af1166] + SortingAlgorithms v1.2.2 [9f842d2f] + SparseConnectivityTracer v1.2.1 [0a514795] + SparseMatrixColorings v0.4.27 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.4 [2efcf032] + SymbolicIndexingInterface v0.3.48 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [ea10d353] + WeakRefStrings v1.4.3 [76eceee3] + WorkerUtilities v1.6.1 [81d17ec3] + L_BFGS_B_jll v3.0.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 7.01s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 23705.9 ms ✓ EnzymeRates 302983.7 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 97734.3 ms ✓ OptimizationPyCMA 40831.6 ms ✓ OptimizationBBO 50485.4 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 173333.8 ms ✓ OrdinaryDiffEqDifferentiation 484368.9 ms ✓ NonlinearSolve 113937.9 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 19620.3 ms ✓ OrdinaryDiffEqNonlinearSolve 68612.8 ms ✓ OrdinaryDiffEqFIRK 10 dependencies successfully precompiled in 1395 seconds. 285 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 166 dependents of these packages may trigger further precompilation to work with the unexpected versions. 1 dependency had output during precompilation: ┌ OptimizationPyCMA │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/lKlVY/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/5WGSP/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/OptimizationPyCMA/5RHxh/CondaPkg.toml │ CondaPkg Resolving changes │ + cma │ + libstdcxx │ + libstdcxx-ng │ + matplotlib │ + openssl │ + python │ CondaPkg Initialising pixi │ │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ │ init │ │ --format pixi │ └ /tmp/jl_wq4frn/.CondaPkg │ ✔ Created /tmp/jl_wq4frn/.CondaPkg/pixi.toml │ CondaPkg Wrote /tmp/jl_wq4frn/.CondaPkg/pixi.toml │ │ [dependencies] │ │ openssl = ">=3, <3.6" │ │ libstdcxx = ">=3.4,<15.0" │ │ libstdcxx-ng = ">=3.4,<15.0" │ │ matplotlib = "*" │ │ cma = "*" │ │ │ │ [dependencies.python] │ │ channel = "conda-forge" │ │ build = "*cp*" │ │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ │ │ [workspace] │ │ name = ".CondaPkg" │ │ platforms = ["linux-64"] │ │ channels = ["conda-forge"] │ │ channel-priority = "strict" │ └ description = "automatically generated by CondaPkg.jl" │ CondaPkg Installing packages │ │ /home/pkgeval/.julia/artifacts/4ae17cee0bd922f66b2c72bf2f01c22481a5ec19/bin/pixi │ │ install │ └ --manifest-path /tmp/jl_wq4frn/.CondaPkg/pixi.toml │ ✔ The default environment has been installed. └ Precompilation completed after 1405.13s ################################################################################ # Testing # Testing EnzymeRates Status `/tmp/jl_0cb7Gi/Project.toml` [4c88cf16] Aqua v0.8.16 [336ed68f] CSV v0.10.16 [a93c6f00] DataFrames v1.8.2 [e7a1c2d3] EnzymeRates v0.1.0 [c3a54625] JET v0.11.4 ⌅ [7f7a1694] Optimization v4.8.0 ⌃ [3e6eede4] OptimizationBBO v0.4.2 ⌃ [fb0822aa] OptimizationPyCMA v1.0.0 ⌅ [5960d6e9] OrdinaryDiffEqFIRK v1.26.0 [10745b16] Statistics v1.11.1 [bd369af6] Tables v1.12.1 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_0cb7Gi/Manifest.toml` [47edcb42] ADTypes v1.22.0 [14f7f29c] AMD v0.5.3 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.6.1 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.16 [4fba245c] ArrayInterface v7.25.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [a134a8b2] BlackBoxOptim v0.6.5 [70df07ce] BracketingNonlinearSolve v1.12.1 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.16 [fb6a15b2] CloseOpenIntervals v0.1.13 [da1fd8a2] CodeTracking v3.0.2 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.7 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.4 [992eb4ea] CondaPkg v0.2.36 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.2 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 ⌅ [2b5f629d] DiffEqBase v6.218.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [a0c0ee7d] DifferentiationInterface v0.7.18 [31c24e10] Distributions v0.25.127 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.7 [f151be2c] EnzymeCore v0.8.20 [e7a1c2d3] EnzymeRates v0.1.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v1.3.2 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.3.0 [a4df4552] FastPower v1.3.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.31.0 [f6369f11] ForwardDiff v1.4.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v1.9.1 [46192b85] GPUArraysCore v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.11.4 [692b3bcd] JLLWrappers v1.8.0 [682c06a0] JSON v1.6.1 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.12 [70703baa] JuliaSyntax v1.0.2 [ba0b0d4f] Krylov v0.10.6 [5be7bae1] LBFGSB v0.4.1 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 ⌅ [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [87fe0de2] LineSearch v0.1.9 [7ed4a6bd] LinearSolve v3.86.0 ⌃ [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [6f1432cf] LoweredCodeUtils v3.5.3 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [0b3b1443] MicroMamba v0.1.15 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.8 [46d2c3a1] MuladdMacro v0.2.4 [77ba4419] NaNMath v1.1.4 [8913a72c] NonlinearSolve v4.19.1 ⌃ [be0214bd] NonlinearSolveBase v2.30.3 [5959db7a] NonlinearSolveFirstOrder v2.1.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.13.1 [26075421] NonlinearSolveSpectralMethods v1.7.1 ⌅ [7f7a1694] Optimization v4.8.0 ⌃ [3e6eede4] OptimizationBBO v0.4.2 ⌅ [bca83a33] OptimizationBase v2.14.0 ⌃ [fb0822aa] OptimizationPyCMA v1.0.0 ⌅ [bac558e1] OrderedCollections v1.8.2 ⌅ [bbf590c4] OrdinaryDiffEqCore v3.33.1 ⌅ [4302a76b] OrdinaryDiffEqDifferentiation v2.9.0 ⌅ [5960d6e9] OrdinaryDiffEqFIRK v1.26.0 ⌅ [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.28.0 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.6 [fa939f87] Pidfile v1.3.0 [f517fe37] Polyester v0.7.19 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [d236fae5] PreallocationTools v1.2.0 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [0c0d3e7f] PureKLU v1.0.1 [6099a3de] PythonCall v0.9.35 [1fd47b50] QuadGK v2.11.3 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v3.54.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [295af30f] Revise v3.15.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.19 [94e857df] SIMDTypes v0.1.0 ⌅ [0bca4576] SciMLBase v2.155.1 [19f34311] SciMLJacobianOperators v0.1.13 ⌅ [a6db7da4] SciMLLogging v1.10.1 [c0aeaf25] SciMLOperators v1.22.0 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.10 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.12.0 [a2af1166] SortingAlgorithms v1.2.2 [a57abbd0] SparseColumnPivotedQR v2.1.1 [9f842d2f] SparseConnectivityTracer v1.2.1 [0a514795] SparseMatrixColorings v0.4.27 [d4ead438] SpatialIndexing v0.1.6 [276daf66] SpecialFunctions v2.8.0 [aedffcd0] Static v1.4.0 [0d7ed370] StaticArrayInterface v1.10.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 [4c63d2b9] StatsFuns v2.2.0 [7792a7ef] StrideArraysCore v0.5.9 [892a3eda] StringManipulation v0.4.4 [ec057cc2] StructUtils v2.8.2 [2efcf032] SymbolicIndexingInterface v0.3.48 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [8290d209] ThreadingUtilities v0.5.6 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [e17b2a0c] UnsafePointers v1.0.0 [ea10d353] WeakRefStrings v1.4.3 [76eceee3] WorkerUtilities v1.6.1 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [81d17ec3] L_BFGS_B_jll v3.0.1+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [f8abcde7] micromamba_jll v2.3.1+0 [1317d2d5] oneTBB_jll v2022.3.0+0 [4d7b5844] pixi_jll v0.63.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 5419.6 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 2024.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 7836.7 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 13083.4 ms ✓ SciMLJacobianOperators 24480.9 ms ✓ LinearSolve 3779.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastPolyesterExt 18473.3 ms ✓ LineSearch 25713.0 ms ✓ NonlinearSolveBase 9619.2 ms ✓ LinearSolve → LinearSolveForwardDiffExt 23497.2 ms ✓ LinearSolve → LinearSolveSparseArraysExt 5146.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 14768.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 5377.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 4358.6 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 8285.6 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 11516.2 ms ✓ BracketingNonlinearSolve 6249.4 ms ✓ LinearSolve → LinearSolveEnzymeExt 21975.4 ms ✓ NonlinearSolveSpectralMethods 37756.1 ms ✓ NonlinearSolveQuasiNewton 64716.9 ms ✓ NonlinearSolveFirstOrder 5161.7 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 12182.9 ms ✓ DiffEqBase 5662.3 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 8401.9 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 24669.8 ms ✓ SimpleNonlinearSolve 11796.6 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 5464.9 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 12742.9 ms ✓ OrdinaryDiffEqCore 109560.5 ms ✓ NonlinearSolve 6341.1 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreSparseArraysExt 14818.3 ms ✓ OrdinaryDiffEqDifferentiation 8974.0 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 20137.9 ms ✓ OrdinaryDiffEqNonlinearSolve Info Given OrdinaryDiffEqFIRK was explicitly requested, output will be shown live  ┌ Warning: `gaussradau(n::Integer, T::Type)` is deprecated, use `gaussradau(T, n)` instead. │ caller = generateRadauTableau(T1::Type, T2::Type, num_stages::Int64) at firk_tableaus.jl:298 └ @ Core ~/.julia/packages/OrdinaryDiffEqFIRK/T347H/src/firk_tableaus.jl:298 75329.4 ms ✓ OrdinaryDiffEqFIRK 34 dependencies successfully precompiled in 638 seconds. 159 already precompiled. 80 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CommonSolve, Compat, Compat → CompatLinearAlgebraExt, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, DataStructures, Dates, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt, Distributed, DocStringExtensions, EnumX, ExprTools, ExproniconLite, FastClosures, FunctionWrappers, FunctionWrappersWrappers, Future, GPUArraysCore, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, Logging, LoggingExtras, MacroTools, Markdown, Moshi, OrderedCollections, PreallocationTools, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLBase → SciMLBaseDifferentiationInterfaceExt, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, SparseArrays, SparseMatrixColorings, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StyledStrings, SuiteSparse_jll, SymbolicIndexingInterface, TOML, TruncatedStacktraces, UUIDs, Unicode and Zlib_jll). Restart julia to access the new versions. Otherwise, 93 dependents of these packages may trigger further precompilation to work with the unexpected versions. 1 dependency had output during precompilation: ┌ OrdinaryDiffEqFIRK │ [Output was shown above] └ Precompiling packages... 1467.9 ms ✓ OptimizationBase → OptimizationForwardDiffExt 1 dependency successfully precompiled in 3 seconds. 101 already precompiled. 98 dependencies precompiled but different versions are currently loaded (ADTypes, ADTypes → ADTypesConstructionBaseExt, Accessors, Accessors → LinearAlgebraExt, Adapt, Adapt → AdaptSparseArraysExt, ArrayInterface, ArrayInterface → ArrayInterfaceGPUArraysCoreExt, ArrayInterface → ArrayInterfaceSparseArraysExt, ArrayInterface → ArrayInterfaceStaticArraysCoreExt, Base64, CommonSolve, CommonSubexpressions, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, Dates, DiffResults, DiffRules, DifferentiationInterface, DifferentiationInterface → DifferentiationInterfaceForwardDiffExt, DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt, DifferentiationInterface → DifferentiationInterfaceSparseArraysExt, DifferentiationInterface → DifferentiationInterfaceSparseConnectivityTracerExt, DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt, Distributed, DocStringExtensions, EnumX, ExprTools, ExproniconLite, FastClosures, FillArrays, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, ForwardDiff, FunctionWrappers, FunctionWrappersWrappers, GPUArraysCore, InteractiveUtils, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLLWrappers, Jieko, JuliaSyntaxHighlighting, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Moshi, NaNMath, OpenLibm_jll, OpenSpecFun_jll, OptimizationBase, PreallocationTools, PreallocationTools → PreallocationToolsForwardDiffExt, PreallocationTools → PreallocationToolsSparseConnectivityTracerExt, PrecompileTools, Preferences, Printf, RecipesBase, RecursiveArrayTools, RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt, RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt, RecursiveArrayTools → RecursiveArrayToolsStatisticsExt, Reexport, RuntimeGeneratedFunctions, SciMLBase, SciMLBase → SciMLBaseDifferentiationInterfaceExt, SciMLBase → SciMLBaseForwardDiffExt, SciMLLogging, SciMLOperators, SciMLOperators → SciMLOperatorsSparseArraysExt, SciMLOperators → SciMLOperatorsStaticArraysCoreExt, SciMLPublic, SciMLStructures, Serialization, SparseArrays, SparseConnectivityTracer, SparseConnectivityTracer → SparseConnectivityTracerLogExpFunctionsExt, SparseConnectivityTracer → SparseConnectivityTracerNaNMathExt, SparseConnectivityTracer → SparseConnectivityTracerSpecialFunctionsExt, SparseMatrixColorings, SpecialFunctions, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StyledStrings, SuiteSparse_jll, SymbolicIndexingInterface, TOML, TruncatedStacktraces and Unicode). Restart julia to access the new versions. Otherwise, 4 dependents of these packages may trigger further precompilation to work with the unexpected versions. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 568 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm17ScheduleDAGInstrs14addPhysRegDepsEPNS_5SUnitEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm17ScheduleDAGInstrs15buildSchedGraphEPNS_9AAResultsEPNS_18RegPressureTrackerEPNS_13PressureDiffsEPNS_13LiveIntervalsEb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_120SchedulePostRATDList8scheduleEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_115PostRAScheduler20runOnMachineFunctionERN4llvm15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3528 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 ode_steady_state_flux at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:575 unknown function (ip: 0x70ea7f377107) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #139 at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:778 _all at ./anyall.jl:197 unknown function (ip: 0x70ea7f37383c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #all#777 at ./reducedim.jl:992 all at ./reducedim.jl:992 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:769 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:677 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:769 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] #test_ode_steadystate#137 at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:767 test_ode_steadystate at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:763 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:955 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] run_all_tests at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:947 macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:965 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] top-level scope at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:964 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_invoke at /source/src/gf.c:4021 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70ea9b2b0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 jfptr_wait_70429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2556 unknown function (ip: 0x7f1ebd183d53) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2496 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2311 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2164 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2278 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7f1ebd17abdc) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2225 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2215 unknown function (ip: 0x7f1ebd16e329) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2481 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] #test#174 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:529 unknown function (ip: 0x7f1ebd16df61) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7f1ebd169110) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7f1ebd1628df) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f1ed963c249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007f1ebedfc010 Total snapshots: 336. Utilization: 0% ╎336 @Base/client.jl:550 _start() ╎ 336 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 336 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 336 @Base/loading.jl:2933 _include(mapexpr::Function, mod::Module, _pat… ╎ 336 @Base/loading.jl:2873 include_string(mapexpr::typeof(identity), mo… ╎ 336 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 336 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 336 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 336 @Pkg/src/API.jl:157 test ╎ ╎ 336 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 336 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 336 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 336 @Pkg/src/API.jl:529 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 336 @Pkg/src/API.jl:552 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 336 @Pkg/…erations.jl:2387 test ╎ ╎ ╎ 336 @Pkg/…erations.jl:2481 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 336 @Pkg/…rations.jl:2215 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 336 @Pkg/…rations.jl:2225 #sandbox#182 ╎ ╎ ╎ ╎ 336 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 336 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 336 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 336 @Pkg/…tions.jl:2278 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 336 @Pkg/…tions.jl:2164 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 336 @Pkg/…tions.jl:2311 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 336 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 336 @Pkg/…ions.jl:2496 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 336 @Pkg/…ons.jl:2556 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…ss.jl:693 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…sk.jl:1228 wait() 335╎ ╎ ╎ ╎ ╎ ╎ ╎ 336 @Base/…sk.jl:1216 poptask(W::Base.Intr… [568] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:963 _ZNK4llvm12DenseMapBaseINS_8DenseMapIPNS_10BasicBlockENS_14DomTreeBuilder11SemiNCAInfoINS_17DominatorTreeBaseIS2_Lb0EEEE7InfoRecENS_12DenseMapInfoIS3_vEENS_6detail12DenseMapPairIS3_S9_EEEES3_S9_SB_SE_E15LookupBucketForIS3_EEbRKT_RPKSE_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm12DenseMapBaseINS_8DenseMapIPNS_10BasicBlockENS_14DomTreeBuilder11SemiNCAInfoINS_17DominatorTreeBaseIS2_Lb0EEEE7InfoRecENS_12DenseMapInfoIS3_vEENS_6detail12DenseMapPairIS3_S9_EEEES3_S9_SB_SE_E16FindAndConstructERKS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14DomTreeBuilder11SemiNCAInfoINS_17DominatorTreeBaseINS_10BasicBlockELb0EEEE20CalculateFromScratchERS4_PNS5_15BatchUpdateInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm14verifyFunctionERKNS_8FunctionEPNS_11raw_ostreamE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) verifyLLVMIR at /source/src/pipeline.cpp:848 runOnLoop at /source/src/llvm-julia-licm.cpp:348 run at /source/src/llvm-julia-licm.cpp:373 run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE13runSinglePassIS1_St10unique_ptrINS_6detail11PassConceptIS1_S5_JS4_S7_EEESt14default_deleteISD_EEEESt8optionalINS_17PreservedAnalysesEERT_RT0_RS5_S4_S7_RNS_19PassInstrumentationE.isra.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE24runWithoutLoopNestPassesERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE3runERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm25FunctionToLoopPassAdaptor3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 run at /source/usr/include/llvm/IR/PassManager.h:543 [inlined] run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) run at /source/src/pipeline.cpp:741 operator() at /source/src/jitlayers.cpp:1459 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1420 [inlined] operator() at /source/src/jitlayers.cpp:1572 [inlined] addModule at /source/src/jitlayers.cpp:2031 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3528 _jl_invoke at /source/src/gf.c:4006 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #__solve#67 at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/rnOL4/src/solve.jl:10 __solve at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/rnOL4/src/solve.jl:1 [inlined] #solve_call#23 at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:172 [inlined] solve_call at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:137 [inlined] #solve_up#30 at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:646 [inlined] solve_up at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:619 [inlined] #solve#29 at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:603 [inlined] solve at /home/pkgeval/.julia/packages/DiffEqBase/CJTzr/src/solve.jl:591 unknown function (ip: 0x70ea7f3ad6d5) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 ode_steady_state_flux at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:575 unknown function (ip: 0x70ea7f377107) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #139 at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:778 _all at ./anyall.jl:197 unknown function (ip: 0x70ea7f37383c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #all#777 at ./reducedim.jl:992 all at ./reducedim.jl:992 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:769 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:677 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:769 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] #test_ode_steadystate#137 at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:767 test_ode_steadystate at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:763 [inlined] macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:955 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] run_all_tests at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:947 macro expansion at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:965 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:1777 [inlined] top-level scope at /home/pkgeval/.julia/packages/EnzymeRates/yyTrF/test/test_rate_eq_derivation.jl:964 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_invoke at /source/src/gf.c:4021 jl_toplevel_eval_flex at /source/src/toplevel.c:1024 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2873 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2933 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_53184.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:283 _start at ./client.jl:550 jfptr__start_64964.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70ea9b2b0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 131985000 (Pool: 131983646; Big: 1354); GC: 62 PkgEval terminated after 2728.45s: test duration exceeded the time limit