Package evaluation to test DiffEqParamEstim on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T23:20:13.673 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 5.94s ################################################################################ # Installation # Installing DiffEqParamEstim... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [1130ab10] + DiffEqParamEstim v2.3.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.22.0 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.25.0 [70df07ce] + BracketingNonlinearSolve v1.12.1 [49dc2e85] + Calculus v0.5.2 [38540f10] + CommonSolve v0.2.7 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.4 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [39dd38d3] + Dierckx v0.5.4 ⌅ [2b5f629d] + DiffEqBase v6.218.0 [1130ab10] + DiffEqParamEstim v2.3.0 [a0c0ee7d] + DifferentiationInterface v0.7.18 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.7 [f151be2c] + EnzymeCore v0.8.20 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v1.3.2 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v1.9.1 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [ae98c720] + Jieko v0.2.1 [2ab3a3ac] + LogExpFunctions v1.0.1 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.8 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [be0214bd] + NonlinearSolveBase v2.30.3 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 [06bb1623] + PenaltyFunctions v0.3.0 [d236fae5] + PreallocationTools v1.2.0 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v3.54.0 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.19 ⌅ [0bca4576] + SciMLBase v2.155.1 [19f34311] + SciMLJacobianOperators v0.1.13 ⌅ [a6db7da4] + SciMLLogging v1.10.1 [c0aeaf25] + SciMLOperators v1.22.0 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [aedffcd0] + Static v1.4.0 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [2efcf032] + SymbolicIndexingInterface v0.3.48 [a759f4b9] + TimerOutputs v0.5.29 [781d530d] + TruncatedStacktraces v1.4.0 [cd4c43a9] + Dierckx_jll v0.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 4.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 66076.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceZygoteExt 102086.8 ms ✓ RecursiveArrayTools → RecursiveArrayToolsZygoteExt 4123.2 ms ✓ SparseConnectivityTracer → SparseConnectivityTracerNNlibExt 15468.0 ms ✓ SciMLBase → SciMLBaseZygoteExt 71293.0 ms ✓ OptimizationBase → OptimizationZygoteExt 19063.0 ms ✓ Optimization 6324.0 ms ✓ OptimizationNLopt 65894.8 ms ✓ OptimizationOptimJL 40803.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseTrackerExt 44719.2 ms ✓ SymbolicUtils → SymbolicUtilsDistributionsExt 3683.1 ms ✓ Tracker → TrackerPDMatsExt 3218.3 ms ✓ FastPower → FastPowerTrackerExt 3197.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceTrackerExt 3283.7 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 69045.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 7148.9 ms ✓ SciMLBase → SciMLBaseTrackerExt 40752.0 ms ✓ Zygote → ZygoteTrackerExt 4739.0 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 10667.5 ms ✓ Symbolics → SymbolicsLatexifyExt 59691.2 ms ✓ OptimizationBase → OptimizationEnzymeExt 160321.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseEnzymeExt 132496.9 ms ✓ OptimizationBBO 167208.7 ms ✓ SymbolicUtils → SymbolicUtilsReverseDiffExt 65149.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseReverseDiffExt 30023.7 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveTrackerExt 8029.1 ms ✓ DiffEqBase → DiffEqBaseTrackerExt 13863.1 ms ✓ DiffEqBase → DiffEqBaseReverseDiffExt 132637.8 ms ✓ Sundials 38265.5 ms ? DiffEqParamEstim 114422.8 ms ✓ DiffEqNoiseProcess 22557.6 ms ✓ SteadyStateDiffEq 9928.1 ms ✓ JumpProcesses → JumpProcessesKernelAbstractionsExt 225704.3 ms ✓ ImplicitDiscreteSolve 401439.3 ms ✓ DelayDiffEq 89396.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsReverseDiffExt 34956.1 ms ✓ NonlinearSolve → NonlinearSolveSundialsExt 7071.7 ms ✓ DiffEqNoiseProcess → DiffEqNoiseProcessOptimExt 14288.2 ms ✓ DiffEqNoiseProcess → DiffEqNoiseProcessReverseDiffExt 37304.4 ms ✓ StochasticDiffEqCore 133702.6 ms ? ModelingToolkitBase ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000789501cca950 Total snapshots: 452. Utilization: 0% ╎452 @Base/asyncevent.jl:359 (::Base.var"#653#654"{FileWatching.Pidfile.var… ╎ 452 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 452 @Base/condition.jl:136 wait ╎ 452 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 452 @Base/task.jl:1228 wait() 451╎ 452 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_43684.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_finish_task at /source/src/task.c:342 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000076ef14b45d20 Total snapshots: 537. Utilization: 0% ╎537 @Base/task.jl:868 task_done_hook(t::Task) ╎ 537 @Base/task.jl:1228 wait() 536╎ 537 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 66109192 (Pool: 66108210; Big: 982); GC: 49 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:156 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 11866035 (Pool: 11865409; Big: 626); GC: 11 PkgEval terminated after 2743.45s: test duration exceeded the time limit