Package evaluation to test DFTK on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-20T01:44:09.957


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.12`

Set-up completed after 8.1s


################################################################################
# Installation
#

Installing DFTK...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [acf6eb54] + DFTK v0.7.25
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [47edcb42] + ADTypes v1.22.0
  [621f4979] + AbstractFFTs v1.5.0
  [7d9f7c33] + Accessors v0.1.44
  [79e6a3ab] + Adapt v4.6.1
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.25.0
  [a963bdd2] + AtomsBase v0.5.2
  [a3e0e189] + AtomsCalculators v0.2.3
  [13072b0f] + AxisAlgorithms v1.1.0
  [ada6cbde] + Bravais v0.2.5
  [23470ee3] + Brillouin v0.5.31
  [d360d2e6] + ChainRulesCore v1.26.1
  [38540f10] + CommonSolve v0.2.7
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.18.1
  [b0b7db55] + ComponentArrays v0.15.39
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.6.0
⌅ [80545937] + CrystallographyCore v0.3.3
  [acf6eb54] + DFTK v0.7.25
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.5
  [6bd331d2] + DftFunctionals v0.3.2
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.16.0
  [a0c0ee7d] + DifferentiationInterface v0.7.18
  [c3f9d41a] + DirectQhull v0.2.1
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.7
  [e2ba6199] + ExprTools v0.1.10
  [8f5d6c58] + EzXML v1.2.3
  [7a1cc6ca] + FFTW v1.10.0
  [1a297f60] + FillArrays v1.16.0
  [6a86dc24] + FiniteDiff v2.31.0
  [f6369f11] + ForwardDiff v1.4.1
  [d9f16b24] + Functors v0.5.2
  [46192b85] + GPUArraysCore v0.2.0
  [615f187c] + IfElse v0.1.1
  [a98d9a8b] + Interpolations v0.16.3
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] + JLLWrappers v1.8.0
  [0b1a1467] + KrylovKit v0.10.3
  [66e17ffc] + Libxc v0.3.25
⌃ [d3d80556] + LineSearches v7.5.1
  [7a12625a] + LinearMaps v3.11.4
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [da04e1cc] + MPI v0.20.26
  [3da0fdf6] + MPIPreferences v0.1.12
  [1914dd2f] + MacroTools v0.5.16
  [e1d29d7a] + Missings v1.2.0
⌅ [d41bc354] + NLSolversBase v7.10.0
  [77ba4419] + NaNMath v1.1.4
  [6fe1bfb0] + OffsetArrays v1.17.0
⌅ [429524aa] + Optim v1.13.3
⌅ [bac558e1] + OrderedCollections v1.8.2
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [7b2266bf] + PeriodicTable v1.2.1
  [eebad327] + PkgVersion v0.3.3
  [85a6dd25] + PositiveFactorizations v0.2.4
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [5751a51d] + PseudoPotentialData v0.3.2
  [cb339c56] + PseudoPotentialIO v0.3.2
  [43287f4e] + PtrArrays v1.4.0
  [c84ed2f1] + Ratios v0.4.5
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [f2b01f46] + Roots v3.0.0
  [431bcebd] + SciMLPublic v1.0.1
  [efcf1570] + Setfield v1.1.2
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.8.0
  [f761d5c5] + Spglib v1.2.0
  [aedffcd0] + Static v1.4.0
  [0d7ed370] + StaticArrayInterface v1.10.0
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.12
  [8bd03d06] + StructEqualHash v0.1.5
  [6ec83bb0] + StructEquality v2.1.0
  [a759f4b9] + TimerOutputs v0.5.29
  [1986cc42] + Unitful v1.28.0
  [a7773ee8] + UnitfulAtomic v1.0.0
⌅ [409d34a3] + VectorInterface v0.5.0
  [efce3f68] + WoodburyMatrices v1.1.0
  [4ee394cb] + CUDA_Driver_jll v13.3.0+0
  [76a88914] + CUDA_Runtime_jll v0.23.0+0
  [f5851436] + FFTW_jll v3.3.12+0
  [e33a78d0] + Hwloc_jll v2.14.0+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [25af9330] + Libxc_GPU_jll v7.0.0+3
  [a56a6d9d] + Libxc_jll v7.0.0+2
  [856f044c] + MKL_jll v2025.2.0+0
  [b5ada748] + MPIABI_jll v0.1.5+0
  [7cb0a576] + MPICH_jll v5.0.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.6+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] + OpenMPI_jll v5.0.11+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
⌅ [784f63db] + Qhull_jll v8.0.1004+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
  [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0
  [1317d2d5] + oneTBB_jll v2022.3.0+0
  [ac4a9f1e] + spglib_jll v2.7.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.1
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.15.0+0
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.11.4
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.6+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.64.0+1
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 18.08s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   3519.2 ms  ✓ wannier90_jll
   5367.2 ms  ✓ Libxc_GPU_jll
   5133.5 ms  ✓ PseudoPotentialIO
   3494.7 ms  ✓ PubChemCrawler
  15449.0 ms  ✓ MPI → AMDGPUExt
  15223.9 ms  ✓ GeometryOptimization
  16465.7 ms  ✓ Libxc
  31559.8 ms  ✓ AtomsBuilder
 179175.7 ms  ? Libxc → LibxcCudaExt
 352591.8 ms  ✓ DFTK
 445939.8 ms  ✓ DFTK → DFTKAMDGPUExt
 383240.0 ms  ✓ DFTK → DFTKWriteVTKExt
 165531.6 ms  ✓ DFTK → DFTKWannierExt
  59167.4 ms  ✓ DFTK → DFTKGeometryOptimizationExt
 197814.0 ms  ✓ DFTK → DFTKPlotsExt
  33180.8 ms  ✓ DFTK → DFTKWannier90Ext
  32593.6 ms  ✓ DFTK → DFTKJSON3Ext
  87843.8 ms  ✓ DFTK → DFTKJLD2Ext

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 71 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#406 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
#653 at ./asyncevent.jl:359
jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4014 [inlined]
ijl_apply_generic at /source/src/gf.c:4214
jl_apply at /source/src/julia.h:2397 [inlined]
start_task at /source/src/task.c:1253
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x000076d9cfcf2a40 Total snapshots: 352. Utilization: 0%
   ╎352 @Base/asyncevent.jl:359  (::Base.var"#653#654"{FileWatching.Pidfile.var…
   ╎ 352 @Base/asyncevent.jl:185  _trywait(t::Timer)
   ╎  352 @Base/condition.jl:136  wait
   ╎   352 @Base/condition.jl:141  wait(c::Base.GenericCondition{Base.Threads.S…
   ╎    352 @Base/task.jl:1228  wait()
351╎     352 @Base/task.jl:1216  poptask(W::Base.IntrusiveLinkedListSynchronize…


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
task_done_hook at ./task.jl:868
jfptr_task_done_hook_43684.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4014 [inlined]
ijl_apply_generic at /source/src/gf.c:4214
jl_apply at /source/src/julia.h:2397 [inlined]
jl_finish_task at /source/src/task.c:342
start_task at /source/src/task.c:1264
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x0000784c7379b760 Total snapshots: 389. Utilization: 0%
   ╎389 @Base/task.jl:868  task_done_hook(t::Task)
   ╎ 389 @Base/task.jl:1228  wait()
388╎  389 @Base/task.jl:1216  poptask(W::Base.IntrusiveLinkedListSynchronized{T…


[71] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/precompile.jl:34
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#406 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
#653 at ./asyncevent.jl:359
jfptr_YY.653_3180.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4014 [inlined]
ijl_apply_generic at /source/src/gf.c:4214
jl_apply at /source/src/julia.h:2397 [inlined]
start_task at /source/src/task.c:1253
unknown function (ip: (nil)) at (unknown file)
Allocations: 29334827 (Pool: 29333807; Big: 1020); GC: 36

[1] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:156
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#406 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
profile_printing_listener at ./Base.jl:332
#start_profile_listener##0 at ./Base.jl:352
jfptr_YY.start_profile_listenerYY.YY.0_10036.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4014 [inlined]
ijl_apply_generic at /source/src/gf.c:4214
jl_apply at /source/src/julia.h:2397 [inlined]
start_task at /source/src/task.c:1253
unknown function (ip: (nil)) at (unknown file)
Allocations: 15913343 (Pool: 15912643; Big: 700); GC: 12

PkgEval terminated after 2745.88s: test duration exceeded the time limit