Package evaluation to test AdvancedMH on Julia 1.12.7-DEV.42 (6f510b6086*) started at 2026-06-19T19:26:28.351 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.49s ################################################################################ # Installation # Installing AdvancedMH... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [5b7e9947] + AdvancedMH v0.8.10 Updating `~/.julia/environments/v1.12/Manifest.toml` [80f14c24] + AbstractMCMC v5.15.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [5b7e9947] + AdvancedMH v0.8.10 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [198e06fe] + BangBang v0.4.9 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.16.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.8.0 ⌅ [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v1.0.1 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 [21216c6a] + Preferences v1.5.2 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.8.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [5d786b92] + TerminalLoggers v0.1.7 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.42s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.12/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 5275.6 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 32591.7 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 2 dependencies successfully precompiled in 43 seconds. 158 already precompiled. 9 dependencies precompiled but different versions are currently loaded (Base64, Dates, JuliaSyntaxHighlighting, Logging, Markdown, Printf, StyledStrings, TOML and UUIDs). Restart julia to access the new versions. Otherwise, 76 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 64.25s ################################################################################ # Testing # Testing AdvancedMH Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_i70sHY/Project.toml` [5b7e9947] + AdvancedMH v0.8.10 [163ba53b] + DiffResults v1.1.0 [f6369f11] + ForwardDiff v1.4.1 [996a588d] + LogDensityProblemsAD v1.13.1 [c7f686f2] + MCMCChains v7.7.0 [09ab397b] + StructArrays v0.7.3 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_i70sHY/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.6.1 [5b7e9947] + AdvancedMH v0.8.10 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [d360d2e6] + ChainRulesCore v1.26.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [b86e33f2] + FFTA v0.3.1 [f6369f11] + ForwardDiff v1.4.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.3 [8197267c] + IntervalSets v0.7.14 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [5ab0869b] + KernelDensity v0.6.12 [b964fa9f] + LaTeXStrings v1.4.0 [996a588d] + LogDensityProblemsAD v1.13.1 ⌅ [2ab3a3ac] ↓ LogExpFunctions v1.0.1 ⇒ v0.3.29 [c7f686f2] + MCMCChains v7.7.0 [be115224] + MCMCDiagnosticTools v0.3.19 [e80e1ace] + MLJModelInterface v1.12.1 [46d2c3a1] + MuladdMacro v0.2.4 [77ba4419] + NaNMath v1.1.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [aea7be01] + PrecompileTools v1.3.4 [08abe8d2] + PrettyTables v3.3.2 [27ebfcd6] + Primes v0.5.7 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [30f210dd] + ScientificTypesBase v3.1.0 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 ⌅ [4c63d2b9] ↓ StatsFuns v2.2.0 ⇒ v1.5.2 [892a3eda] + StringManipulation v0.4.4 [09ab397b] + StructArrays v0.7.3 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [efce3f68] + WoodburyMatrices v1.1.0 [b77e0a4c] + InteractiveUtils v1.11.0 [a63ad114] + Mmap v1.11.0 [3fa0cd96] + REPL v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_i70sHY/Project.toml` [80f14c24] AbstractMCMC v5.15.1 [5b7e9947] AdvancedMH v0.8.10 [163ba53b] DiffResults v1.1.0 [31c24e10] Distributions v0.25.127 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.16.0 [f6369f11] ForwardDiff v1.4.1 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [c7f686f2] MCMCChains v7.7.0 [ae029012] Requires v1.3.1 [09ab397b] StructArrays v0.7.3 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_i70sHY/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.15.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.44 [79e6a3ab] Adapt v4.6.1 [5b7e9947] AdvancedMH v0.8.10 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [198e06fe] BangBang v0.4.9 [d360d2e6] ChainRulesCore v1.26.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.5 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.16.0 [31c24e10] Distributions v0.25.127 [ffbed154] DocStringExtensions v0.9.5 [b86e33f2] FFTA v0.3.1 [1a297f60] FillArrays v1.16.0 [f6369f11] ForwardDiff v1.4.1 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.3 [8197267c] IntervalSets v0.7.14 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.8.0 [5ab0869b] KernelDensity v0.6.12 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 ⌅ [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [c7f686f2] MCMCChains v7.7.0 [be115224] MCMCDiagnosticTools v0.3.19 [e80e1ace] MLJModelInterface v1.12.1 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 [77ba4419] NaNMath v1.1.4 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 ⌅ [bac558e1] OrderedCollections v1.8.2 [90014a1f] PDMats v0.11.37 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.6 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.4.0 [1fd47b50] QuadGK v2.11.3 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [30f210dd] ScientificTypesBase v3.1.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.8.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.12 ⌅ [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.4 [09ab397b] StructArrays v0.7.3 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [efce3f68] WoodburyMatrices v1.1.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 5313.3 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 1 dependency successfully precompiled in 7 seconds. 83 already precompiled. 80 dependencies precompiled but different versions are currently loaded (AbstractMCMC, AbstractTrees, Accessors, Accessors → LinearAlgebraExt, Accessors → StructArraysExt, AdvancedMH, AliasTables, ArgCheck, BangBang, BangBang → BangBangStructArraysExt, BangBang → BangBangTablesExt, Base64, CompilerSupportLibraries_jll, CompositionsBase, CompositionsBase → CompositionsBaseInverseFunctionsExt, ConsoleProgressMonitor, ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, DataAPI, DataStructures, DataValueInterfaces, Dates, Distributed, Distributions, DocStringExtensions, FillArrays, FillArrays → FillArraysPDMatsExt, FillArrays → FillArraysSparseArraysExt, FillArrays → FillArraysStatisticsExt, HypergeometricFunctions, InitialValues, InverseFunctions, InverseFunctions → InverseFunctionsDatesExt, IrrationalConstants, IteratorInterfaceExtensions, JLLWrappers, JuliaSyntaxHighlighting, LeftChildRightSiblingTrees, LogDensityProblems, LogExpFunctions, LogExpFunctions → LogExpFunctionsInverseFunctionsExt, Logging, LoggingExtras, MacroTools, Markdown, Missings, OpenLibm_jll, OpenSpecFun_jll, OrderedCollections, PDMats, PDMats → StatsBaseExt, Preferences, Printf, ProgressLogging, ProgressMeter, PtrArrays, QuadGK, Reexport, Rmath, Rmath_jll, Serialization, SortingAlgorithms, SparseArrays, SpecialFunctions, Statistics, Statistics → SparseArraysExt, StatsAPI, StatsBase, StatsFuns, StatsFuns → StatsFunsInverseFunctionsExt, StructArrays, StyledStrings, SuiteSparse, SuiteSparse_jll, TOML, TableTraits, Tables, TerminalLoggers, UUIDs and Unicode). Restart julia to access the new versions. Otherwise, 4 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompiling packages... 4918.6 ms ✓ StructArrays → StructArraysStaticArraysExt 1 dependency successfully precompiled in 5 seconds. 19 already precompiled. 18 dependencies precompiled but different versions are currently loaded (ConstructionBase, ConstructionBase → ConstructionBaseLinearAlgebraExt, ConstructionBase → ConstructionBaseStaticArraysExt, DataAPI, DataValueInterfaces, Dates, IteratorInterfaceExtensions, OrderedCollections, PrecompileTools, Preferences, Printf, StaticArrays, StaticArraysCore, StructArrays, TOML, TableTraits, Tables and Unicode). Restart julia to access the new versions. Otherwise, 2 dependents of these packages may trigger further precompilation to work with the unexpected versions. ┌ Warning: Only a single process available: MCMC chains are not sampled in parallel └ @ AbstractMCMC ~/.julia/packages/AbstractMCMC/C1aKp/src/sample.jl:732 ┌ Warning: Only a single thread available: MCMC chains are not sampled in parallel └ @ AbstractMCMC ~/.julia/packages/AbstractMCMC/C1aKp/src/sample.jl:544 Test Summary: | Pass Total Time AdvancedMH | 310 310 2m22.7s Testing AdvancedMH tests passed Testing completed after 179.16s PkgEval succeeded after 270.43s