Package evaluation to test XAM on Julia 1.14.0-DEV.2309 (6e1a27e459*) started at 2026-06-06T10:14:44.136 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.47s ################################################################################ # Installation # Installing XAM... Resolving package versions... Installed BioAlignments ────── v3.1.0 Installed Automa ───────────── v1.1.0 Installed Compat ───────────── v4.18.1 Installed SIMD ─────────────── v3.7.2 Installed Twiddle ──────────── v1.1.2 Installed DataStructures ───── v0.18.22 Installed Indexes ──────────── v0.1.3 Installed Preferences ──────── v1.5.2 Installed BioSymbols ───────── v5.2.0 Installed PrecompileTools ──── v1.3.4 Installed BioGenerics ──────── v0.1.5 Installed CodecZlib ────────── v0.7.8 Installed IntervalTrees ────── v1.1.0 Installed BioSequences ─────── v3.5.1 Installed TranscodingStreams ─ v0.9.13 Installed BGZFStreams ──────── v0.3.2 Installed GenomicFeatures ──── v2.1.0 Installed XAM ──────────────── v0.4.2 Installed OrderedCollections ─ v1.8.2 Updating `~/.julia/environments/v1.14/Project.toml` [d759349c] + XAM v0.4.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [67c07d97] + Automa v1.1.0 [28d598bf] + BGZFStreams v0.3.2 [00701ae9] + BioAlignments v3.1.0 [47718e42] + BioGenerics v0.1.5 [7e6ae17a] + BioSequences v3.5.1 [3c28c6f8] + BioSymbols v5.2.0 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 ⌅ [864edb3b] + DataStructures v0.18.22 ⌅ [899a7d2d] + GenomicFeatures v2.1.0 ⌅ [4ffb77ac] + Indexes v0.1.3 [524e6230] + IntervalTrees v1.1.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [fdea26ae] + SIMD v3.7.2 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [7200193e] + Twiddle v1.1.2 [d759349c] + XAM v0.4.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0 [4536629a] + OpenBLAS_jll v0.3.33+0 [83775a58] + Zlib_jll v1.3.2+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 6.6 s ✓ TestEnv 1 dependency successfully precompiled in 7 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 1.3 s ✓ ANSIColoredPrinters 0.9 s ✓ LazilyInitializedFields 150.4 s ✓ OrderedCollections 0.6 s ✓ Twiddle 1.2 s ✓ DocStringExtensions 74.9 s ✓ AbstractTrees 89.9 s ✓ IntervalTrees 0.8 s ✓ IOCapture 3.2 s ✓ StructUtils 1.6 s ✓ Compat 1.8 s ✓ FormatSpecimens 2.9 s ✓ Preferences 91.7 s ✓ TranscodingStreams 7.9 s ✓ RegistryInstances 21.5 s ✓ MarkdownAST 0.7 s ✓ Compat → CompatLinearAlgebraExt 3.3 s ✓ JLLWrappers 3.0 s ✓ PrecompileTools 59.1 s ✓ BioGenerics 40.0 s ✓ CodecZlib 268.5 s ✓ DataStructures 3.3 s ✓ Libiconv_jll 3.6 s ✓ Git_LFS_jll 3.7 s ✓ OpenSSH_jll 3.8 s ✓ Expat_jll 120.3 s ✓ BioSymbols 646.0 s ✓ SIMD 38.7 s ✓ Parsers 38.1 s ✓ BGZFStreams 196.9 s ✓ GenomicFeatures 3.6 s ✓ Git_jll 109.6 s ✓ BioSequences 206.9 s ✓ Automa 105.5 s ✓ JSON 123.3 s ✓ Indexes 2.2 s ✓ Git ┌ Info: JuliaLowering threw given input: │ code = │ :(#= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:9 =# Core.@doc "Defines how to align a given sequence onto a reference sequence.\nThe alignment is represented as a sequence of elementary operations (match, insertion, deletion etc)\nanchored to specific positions of the input and reference sequence.\n" struct Alignment │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:15 =# │ anchors::Vector{AlignmentAnchor} │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:16 =# │ firstref::Int │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:17 =# │ lastref::Int │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:20 =# │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:20 =# @doc (" Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n"->begin │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:20 =# │ function Alignment(anchors::Vector{AlignmentAnchor}, check::Bool = true) │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:25 =# │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:27 =# │ if check │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:28 =# │ check_alignment_anchors(anchors) │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:32 =# │ firstref = 0 │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:33 =# │ for i = 1:length(anchors) │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:34 =# │ if ismatchop((anchors[i]).op) │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:35 =# │ firstref = (anchors[i - 1]).refpos + 1 │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:36 =# │ break │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:38 =# │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:40 =# │ lastref = 0 │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:41 =# │ for i = length(anchors):-1:1 │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:42 =# │ if ismatchop((anchors[i]).op) │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:43 =# │ lastref = (anchors[i]).refpos │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:44 =# │ break │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:46 =# │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:48 =# │ return new(anchors, firstref, lastref) │ end │ end) │ end) │ st0 = │ SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source,__macro_ctx__ │ [macrocall] │ │ @doc :: Identifier │ mod │ :(#= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:9 =#) :: Value │ │ "Defines how to align a given sequence onto a reference sequence.\nThe alignment is represented as a sequence of elementary operations (match, insertion, deletion etc)\nanchored to specific positions of the input and reference sequence.\n" :: Value │ │ [struct] │ │ false :: Value │ │ Alignment :: Identifier │ │ [block] │ │ [::] │ │ anchors :: Identifier │ │ [curly] │ │ Vector :: Identifier │ │ AlignmentAnchor :: Identifier │ │ [::] │ │ firstref :: Identifier │ │ Int :: Identifier │ │ [::] │ │ lastref :: Identifier │ │ Int :: Identifier │ │ [macrocall] │ │ @doc :: Identifier │ │ :(#= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:20 =#) :: Value │ │ [->] │ │ " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" :: Value │ │ [block] │ │ [function] │ │ [call] │ │ Alignment :: Identifier │ │ [::] │ │ anchors :: Identifier │ │ [curly] │ │ Vector :: Identifier │ │ AlignmentAnchor :: Identifier │ │ [kw] │ │ [::] │ │ check :: Identifier │ │ Bool :: Identifier │ │ true :: Value │ │ [block] │ │ [if] │ │ check :: Identifier │ │ [block] │ │ [call] │ │ check_alignment_anchors :: Identifier │ │ anchors :: Identifier │ │ [=] │ │ firstref :: Identifier │ │ 0 :: Value │ │ [for] │ │ [=] │ │ i :: Identifier │ │ [call] │ │ : :: Identifier │ │ 1 :: Value │ │ [call] │ │ length :: Identifier │ │ anchors :: Identifier │ │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ firstref :: Identifier │ │ [call] │ │ + :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ [call] │ │ - :: Identifier │ │ i :: Identifier │ │ 1 :: Value │ │ [inert] │ │ refpos :: Identifier │ │ 1 :: Value │ │ [break] │ │ [=] │ │ lastref :: Identifier │ │ 0 :: Value │ │ [for] │ │ [=] │ │ i :: Identifier │ │ [call] │ │ : :: Identifier │ │ [call] │ │ length :: Identifier │ │ anchors :: Identifier │ │ -1 :: Value │ │ 1 :: Value │ │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ lastref :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ refpos :: Identifier │ │ [break] │ │ [return] │ │ [call] │ │ new :: Identifier │ │ anchors :: Identifier │ │ firstref :: Identifier │ │ lastref :: Identifier │ │ │ st1 = │ SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source │ [block] │ │ [=] │ │ val :: Identifier │ scope_layer=3 │ [struct] │ │ false :: Value │ macro_source=122 │ Alignment :: Identifier │ scope_layer=1 │ [block] │ │ [::] │ │ anchors :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [::] │ │ firstref :: Identifier │ scope_layer=1 │ Int :: Identifier │ scope_layer=1 │ [::] │ │ lastref :: Identifier │ scope_layer=1 │ Int :: Identifier │ scope_layer=1 │ [block] │ │ [block] │ │ [=] │ │ #1#val :: Identifier │ scope_layer=1 │ [function] │ │ [call] │ │ Alignment :: Identifier │ scope_layer=1 │ [::] │ │ anchors :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [kw] │ │ [::] │ │ check :: Identifier │ scope_layer=1 │ Bool :: Identifier │ scope_layer=1 │ true :: Value │ macro_source=122 │ [block] │ │ [if] │ │ check :: Identifier │ scope_layer=1 │ [block] │ │ [call] │ │ check_alignment_anchors :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ [=] │ │ firstref :: Identifier │ scope_layer=1 │ 0 :: Value │ macro_source=122 │ [for] │ │ [=] │ │ i :: Identifier │ scope_layer=1 │ [call] │ │ : :: Identifier │ scope_layer=1 │ 1 :: Value │ macro_source=122 │ [call] │ │ length :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ firstref :: Identifier │ scope_layer=1 │ [call] │ │ + :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ [call] │ │ - :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ 1 :: Value │ macro_source=122 │ [inert] │ │ refpos :: Identifier │ │ 1 :: Value │ macro_source=122 │ [break] │ macro_source=122 │ [=] │ │ lastref :: Identifier │ scope_layer=1 │ 0 :: Value │ macro_source=122 │ [for] │ │ [=] │ │ i :: Identifier │ scope_layer=1 │ [call] │ │ : :: Identifier │ scope_layer=1 │ [call] │ │ length :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ -1 :: Value │ macro_source=122 │ 1 :: Value │ macro_source=122 │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ lastref :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ refpos :: Identifier │ │ [break] │ macro_source=122 │ [return] │ │ [call] │ │ new :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ firstref :: Identifier │ scope_layer=1 │ lastref :: Identifier │ scope_layer=1 │ [call] │ │ Base.Docs.doc! :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [call] │ │ Base.Docs.Binding :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [inert] │ │ Alignment :: Identifier │ │ [call] │ macro_source=122 │ Base.Docs.docstr :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Core.svec :: Value │ macro_source=122 │ " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Dict{Symbol, Any} :: Value │ macro_source=122 │ :path => "/home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl" :: Value │ macro_source=122 │ :linenumber => 20 :: Value │ macro_source=122 │ :module => BioAlignments :: Value │ macro_source=122 │ [curly] │ │ Union :: Identifier │ scope_layer=1 │ [curly] │ │ Tuple :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [curly] │ │ Tuple :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ Bool :: Identifier │ scope_layer=1 │ #1#val :: Identifier │ scope_layer=1 │ [call] │ │ Base.Docs.doc! :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [call] │ │ Base.Docs.Binding :: Value │ macro_source=122 │ BioAlignments :: Value │ │ [inert] │ jl_source=L65 │ Alignment :: Identifier │ │ [call] │ │ Base.Docs.docstr :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Core.svec :: Value │ macro_source=122 │ "Defines how to align a given sequence onto a reference sequence.\nThe alignment is represented as a sequence of elementary operations (match, insertion, deletion etc)\nanchored to specific positions of the input and reference sequence.\n" :: Value │ macro_source=122 │ [call] │ │ Dict{Symbol, Any} :: Value │ macro_source=122 │ :path => "/home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl" :: Value │ macro_source=122 │ :linenumber => 9 :: Value │ macro_source=122 │ :module => BioAlignments :: Value │ macro_source=122 │ [call] │ │ Pair :: Value │ macro_source=122 │ [inert] │ │ fields :: Identifier │ │ [call] │ macro_source=122 │ Dict{Symbol, Any} :: Value │ macro_source=122 │ [curly] │ │ Union :: Identifier │ scope_layer=1 │ val :: Identifier │ scope_layer=3 │ │ file = "/home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl" │ line = 9 └ mod = BioAlignments ERROR: LoadError: LoweringError: #= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:25 =# - assignment syntax in structure fields is reserved Expression:  (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref))))) Containing expressions:  (block (:: anchors (curly Vector AlignmentAnchor)) (:: firstref Int) (:: lastref Int) (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref))))) (call Base.Docs.doc! BioAlignments (call Base.Docs.Binding BioAlignments :Alignment) (call Base.Docs.docstr (call Core.svec " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n") (call Dict{Symbol, Any} :path => "/home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl" :linenumber => 20 :module => BioAlignments)) (curly Union (curly Tuple (curly Vector AlignmentAnchor)) (curly Tuple (curly Vector AlignmentAnchor) Bool))) #1#val)  Detailed provenance:  (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref)))))  ├─ @ /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:25  └─ (macrocall @doc :(#= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:9 =#) "Defines how to align a given sequence onto a reference sequence.\nThe alignment is represented as a sequence of elementary operations (match, insertion, deletion etc)\nanchored to specific positions of the input and reference sequence.\n" (struct false Alignment (block (:: anchors (curly Vector AlignmentAnchor)) (:: firstref Int) (:: lastref Int) (macrocall @doc :(#= /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:20 =#) (-> " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" (block (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref))))))))))  └─ @ /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:9  Stacktrace:  [1] _collect_struct_fields(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, field_names::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_types::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_attrs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_docs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, inner_defs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, exs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, SubArray{Int64, 1, Vector{Int64}, Tuple{UnitRange{Int64}}, true}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:3166  [2] expand_struct_def(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:3736  [3] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4317  [4] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133  [5] expand_assignment(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, is_const::Bool)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:1320  [6] expand_assignment(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:1270  [7] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4177  [8] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133 [inlined]  [9] (::Base.JuliaLowering.var"#expand_forms_2##2#expand_forms_2##3"{Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}})(e::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4421 [inlined]  [10] mapchildren(f::Base.JuliaLowering.var"#expand_forms_2##2#expand_forms_2##3"{Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}}, ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707  [11] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4421  [12] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133 [inlined]  [13] expand_forms_2(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4450  [14] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:30  [15] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:327  [16] top-level scope  @ ~/.julia/packages/BioAlignments/I6ecx/src/BioAlignments.jl:93  [17] include(mod::Module, _path::String)  @ Base Base.jl:326  [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3296  [19] top-level scope  @ stdin:5  [20] eval(m::Module, e::Any)  @ Core boot.jl:521  [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [22] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [23] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [24] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/alignment.jl:9 in expression starting at /home/pkgeval/.julia/packages/BioAlignments/I6ecx/src/BioAlignments.jl:3 in expression starting at stdin:5 ✗ BioAlignments  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 171 running 1 of 1  signal (10): User defined signal 1 _ZN4llvm16DAGTypeLegalizer3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm12SelectionDAG13LegalizeTypesEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm16SelectionDAGISel17CodeGenAndEmitDAGEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm16SelectionDAGISel20SelectAllBasicBlocksERKNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm16SelectionDAGISel20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm22SelectionDAGISelLegacy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1414:23 compileModule at /source/src/jitlayers.cpp:2390:79 materialize at /source/src/jitlayers.cpp:906:36 _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) dispatch at /source/src/julia-task-dispatcher.h:353:11 _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS0_17ExecutorSymbolDefENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) publishCIs at /source/src/jitlayers.cpp:2085:14 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:510:39 jl_compile_method_internal at /source/src/gf.c:3677:27 _jl_invoke at /source/src/gf.c:4130:16 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] ijl_lower at /source/src/ast.c:1274:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:598:31 jl_eval_module_expr at /source/src/toplevel.c:263:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 _include at ./loading.jl:3192:0 (pc: 122) include at ./Base.jl:326:0 (pc: 1) include_package_for_output at ./loading.jl:3296:0 (pc: 837) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) include_string at ./loading.jl:3142:0 [inlined] exec_options at ./client.jl:353:0 (pc: 841) _start at ./client.jl:596:0 (pc: 294) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x70f432083249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)   ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 26 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007327332ed690 Total snapshots: 371. Utilization: 0% ╎371 @Base/task.jl:1168 wait_forever() 370╎ 371 @Base/task.jl:1246 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007bd2ff3feef0 Total snapshots: 394. Utilization: 0% ╎394 @Base/task.jl:1168 wait_forever() 393╎ 394 @Base/task.jl:1246 wait() [26] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) Allocations: 14875265 (Pool: 14874557; Big: 708); GC: 16 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:156 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) Allocations: 16446052 (Pool: 16445355; Big: 697); GC: 14 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:56:0 (pc: 6) #schedule#623 at ./task.jl:1051:0 (pc: 71) schedule at ./task.jl:1043:0 [inlined] uv_writecb_task at ./stream.jl:1198:0 (pc: 11) jlcapi_uv_writecb_task_643.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926:0 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227:0 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420:0 ijl_process_events at /source/src/jl_uv.c:397:21 process_events at ./libuv.jl:133:0 [inlined] wait at ./task.jl:1233:0 (pc: 15) uv_write at ./stream.jl:1079:0 (pc: 11) unsafe_write at ./stream.jl:1152:0 (pc: 55) write at ./strings/io.jl:237:0 [inlined] print at ./strings/io.jl:239:0 (pc: 5) jfptr_print_138.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 showerror at ./errorshow.jl:164:0 (pc: 2) unknown function (ip: 0x732733d93b16) at (unknown file) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 _atexit at ./initdefs.jl:543:0 (pc: 210) jfptr__atexit_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] ijl_atexit_hook at /source/src/init.c:264:17 jl_exit_thread0_cb at /source/src/signals-unix.c:678:5 jl_fake_signal_return at /opt/julia/bin/../lib/julia/libjulia-internal.so.1.14 (unknown line) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 PkgEval terminated after 2730.95s: test duration exceeded the time limit