Package evaluation to test SoilHydraulics on Julia 1.14.0-DEV.2309 (6e1a27e459*) started at 2026-06-07T09:16:55.099 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 16.86s ################################################################################ # Installation # Installing SoilHydraulics... Resolving package versions... Installed NetcdfIO ──────────────────── v0.2.12 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed DiskArrays ────────────────── v0.4.21 Installed Lz4_jll ───────────────────── v1.10.1+0 Installed libaec_jll ────────────────── v1.1.7+0 Installed NetCDF_jll ────────────────── v401.900.300+0 Installed InlineStrings ─────────────── v1.4.5 Installed CFTime ────────────────────── v0.2.10 Installed DataStructures ────────────── v0.18.22 Installed ClimaCache ────────────────── v1.1.8 Installed WaterPhysics ──────────────── v0.1.5 Installed ConstructionBase ──────────── v1.6.0 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 (no artifacts on this platform) Installed OrderedCollections ────────── v1.8.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed StatsBase ─────────────────── v0.33.21 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed Compat ────────────────────── v4.18.1 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed ConstrainedRootSolvers ────── v0.1.5 Installed StatsAPI ──────────────────── v1.8.0 Installed DataValueInterfaces ───────── v1.0.0 Installed SentinelArrays ────────────── v1.4.10 Installed Xorg_libpciaccess_jll ─────── v0.19.0+0 Installed libzip_jll ────────────────── v1.11.3+0 Installed PrecompileTools ───────────── v1.3.4 Installed Blosc_jll ─────────────────── v1.21.7+0 Installed IrrationalConstants ───────── v0.2.6 Installed StringManipulation ────────── v0.4.4 Installed LogExpFunctions ───────────── v0.3.29 Installed OffsetArrays ──────────────── v1.17.0 Installed SoilHydraulics ────────────── v0.2.4 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed Tables ────────────────────── v1.12.1 Installed OpenMPI_jll ───────────────── v5.0.11+0 Installed Hwloc_jll ─────────────────── v2.13.0+1 Installed EmeraldConstants ──────────── v0.1.0 Installed XML2_jll ──────────────────── v2.13.9+0 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed PrettyTables ──────────────── v3.3.2 Installed PooledArrays ──────────────── v1.4.3 Installed DataFrames ────────────────── v1.8.2 Installed TableTraits ───────────────── v1.0.1 Installed MPIPreferences ────────────── v0.1.12 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed Preferences ───────────────── v1.5.2 Installed JLLWrappers ───────────────── v1.8.0 Installed CommonDataModel ───────────── v0.4.3 Installed SortingAlgorithms ─────────── v1.2.2 Installed Crayons ───────────────────── v4.1.1 Installed UnPack ────────────────────── v1.0.2 Installed DocStringExtensions ───────── v0.9.5 Installed XZ_jll ────────────────────── v5.8.3+0 Installed LRUCache ──────────────────── v1.6.2 Installed MPItrampoline_jll ─────────── v5.5.6+0 Installed PkgUtility ────────────────── v0.2.1 Installing 13 artifacts Installed artifact libaec 50.4 KiB Installed artifact Blosc 44.2 KiB Installed artifact Bzip2 503.5 KiB Installed artifact MPICH 3.3 MiB Installed artifact NetCDF 936.0 KiB Installed artifact libzip 177.6 KiB Installed artifact XZ 1.6 MiB Installed artifact Xorg_libpciaccess 26.2 KiB Installed artifact Lz4 239.7 KiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.5 MiB Installed artifact HDF5 5.7 MiB Installed artifact Hwloc 3.5 MiB Updating `~/.julia/environments/v1.14/Project.toml` [a476b75e] + SoilHydraulics v0.2.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [179af706] + CFTime v0.2.10 [781d2db2] + ClimaCache v1.1.8 [1fbeeb36] + CommonDataModel v0.4.3 [34da2185] + Compat v4.18.1 [7e2492bd] + ConstrainedRootSolvers v0.1.5 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [3c3547ce] + DiskArrays v0.4.21 [ffbed154] + DocStringExtensions v0.9.5 [f1e47f7f] + EmeraldConstants v0.1.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.12 [e1d29d7a] + Missings v1.2.0 ⌅ [6a36f34d] + NetcdfIO v0.2.12 [6fe1bfb0] + OffsetArrays v1.17.0 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [0d262f2c] + PkgUtility v0.2.1 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.3.2 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.10 [a476b75e] + SoilHydraulics v0.2.4 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [892a3eda] + StringManipulation v0.4.4 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [20dd5ee6] + WaterPhysics v0.1.5 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.13.0+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 ⌅ [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.6+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 ⌅ [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.11+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.3+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.19.0+0 [477f73a3] + libaec_jll v1.1.7+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0 [deac9b47] + LibCURL_jll v8.20.0+1 [e37daf67] + LibGit2_jll v1.9.4+0 [29816b5a] + LibSSH2_jll v1.11.101+0 [14a3606d] + MozillaCACerts_jll v2026.5.14 [4536629a] + OpenBLAS_jll v0.3.33+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.69.0+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 19.36s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 6.5 s ✓ TestEnv 1 dependency successfully precompiled in 7 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 314.0 s ✓ InlineStrings 0.6 s ✓ Reexport 1.1 s ✓ Statistics 1.1 s ✓ DataAPI 1.2 s ✓ ConstructionBase 2.6 s ✓ IrrationalConstants 0.7 s ✓ UnPack 0.5 s ✓ DataValueInterfaces 0.7 s ✓ StatsAPI 150.4 s ✓ OrderedCollections 56.8 s ✓ InvertedIndices 1.1 s ✓ DocStringExtensions 97.2 s ✓ OffsetArrays 94.4 s ✓ LRUCache 0.5 s ✓ IteratorInterfaceExtensions 41.9 s ✓ LaTeXStrings 2.2 s ✓ Crayons 160.0 s ✓ SentinelArrays 97.2 s ✓ CFTime 1.5 s ✓ Compat 2.9 s ✓ Preferences 42.3 s ✓ Statistics → SparseArraysExt 55.4 s ✓ Missings 23.8 s ✓ PooledArrays 0.6 s ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1.4 s ✓ EmeraldConstants 2.0 s ✓ LogExpFunctions 36.7 s ✓ LRUCache → SerializationExt 0.5 s ✓ TableTraits 0.7 s ✓ Compat → CompatLinearAlgebraExt 3.5 s ✓ JLLWrappers 3.5 s ✓ MPIPreferences 3.2 s ✓ PrecompileTools 190.9 s ✓ DiskArrays 150.9 s ✓ Tables 274.9 s ✓ DataStructures 3.6 s ✓ libaec_jll 3.5 s ✓ Xorg_libpciaccess_jll 3.6 s ✓ Bzip2_jll 3.7 s ✓ Libiconv_jll 3.8 s ✓ Lz4_jll 3.7 s ✓ XZ_jll 2.6 s ✓ MicrosoftMPI_jll 6.6 s ✓ MPItrampoline_jll 78.9 s ✓ StringManipulation 39.0 s ✓ SortingAlgorithms 307.8 s ✓ CommonDataModel 3.7 s ✓ XML2_jll 3.7 s ✓ Blosc_jll 3.8 s ✓ libzip_jll 211.6 s ✓ PrettyTables  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 316 running 1 of 1  signal (10): User defined signal 1 _ZN4llvm11PointerType3getERNS_11LLVMContextEj at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) maybe_decay_tracked at /source/src/cgutils.cpp:93:34 data_pointer at /source/src/cgutils.cpp:123:35 emit_setfield at /source/src/cgutils.cpp:4407:31 emit_new_struct at /source/src/cgutils.cpp:4707:26 emit_expr at /source/src/codegen.cpp:6848:121 emit_ssaval_assign at /source/src/codegen.cpp:6280:25 emit_stmtpos at /source/src/codegen.cpp:6581:27 [inlined] emit_function at /source/src/codegen.cpp:9889:25 jl_emit_code at /source/src/codegen.cpp:10230:67 jl_emit_codeinst at /source/src/codegen.cpp:10295:93 jl_emit_codeinsts_to_jit_impl at /source/src/jitlayers.cpp:472:49 add_codeinsts_to_jit! at ./../usr/share/julia/Compiler/src/typeinfer.jl:1736:0 (pc: 375) typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1742:0 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1750:0 (pc: 17) jfptr_typeinf_ext_toplevel_2.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] jl_type_infer at /source/src/gf.c:463:35 jl_compile_method_internal at /source/src/gf.c:3665:24 _jl_invoke at /source/src/gf.c:4130:16 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] ijl_lower at /source/src/ast.c:1274:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:598:31 jl_eval_module_expr at /source/src/toplevel.c:263:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 _include at ./loading.jl:3192:0 (pc: 122) include at ./Base.jl:326:0 (pc: 1) include_package_for_output at ./loading.jl:3296:0 (pc: 837) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) include_string at ./loading.jl:3142:0 [inlined] exec_options at ./client.jl:353:0 (pc: 841) _start at ./client.jl:596:0 (pc: 294) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x7d3b055ac249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)   ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 110 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d3e51b16e00 Total snapshots: 404. Utilization: 0% ╎404 @Base/task.jl:1168 wait_forever() 403╎ 404 @Base/task.jl:1246 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000078db57e89960 Total snapshots: 409. Utilization: 0% ╎409 @Base/task.jl:1168 wait_forever() 408╎ 409 @Base/task.jl:1246 wait() [110] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) Allocations: 12788662 (Pool: 12787990; Big: 672); GC: 12 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:56:0 (pc: 6) PkgEval terminated after 2730.69s: test duration exceeded the time limit