Package evaluation to test RecurrenceAnalysis on Julia 1.14.0-DEV.2302 (b8ba835509*) started at 2026-06-06T17:16:47.480


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 16.35s


################################################################################
# Installation
#

Installing RecurrenceAnalysis...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [639c3291] + RecurrenceAnalysis v2.1.4
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
  [ec485272] + ArnoldiMethod v0.4.0
  [35d6a980] + ColorSchemes v3.31.0
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [d38c429a] + Contour v0.6.3
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.5
  [8bb1440f] + DelimitedFiles v1.9.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.5
⌅ [53c48c17] + FixedPointNumbers v0.8.6
  [86223c79] + Graphs v1.14.0
  [d25df0c9] + Inflate v0.1.5
  [92d709cd] + IrrationalConstants v0.2.6
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [1914dd2f] + MacroTools v0.5.16
  [299715c1] + MarchingCubes v0.1.11
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.3
  [b8a86587] + NearestNeighbors v0.4.27
  [645ca80c] + Neighborhood v0.2.5
⌅ [bac558e1] + OrderedCollections v1.8.2
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [43287f4e] + PtrArrays v1.4.0
  [639c3291] + RecurrenceAnalysis v2.1.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [699a6c99] + SimpleTraits v0.9.6
  [a2af1166] + SortingAlgorithms v1.2.2
  [40b095a5] + StateSpaceSets v2.5.3
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.11
  [62fd8b95] + TensorCore v0.1.1
  [b8865327] + UnicodePlots v3.8.3
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.14.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.13.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.6s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/RUPmD/src/julia-1.13/activate_set.jl:78
Precompiling package dependencies...

Precompilation completed after 31.8s


################################################################################
# Testing
#

     Testing RecurrenceAnalysis
        Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function.
    Updating `/tmp/jl_P4MvPQ/Project.toml`
  [5732040d] + DelayEmbeddings v2.9.0
  [639c3291] + RecurrenceAnalysis v2.1.4
  [f43a241f] ~ Downloads ⇒ v1.7.0
    Updating `/tmp/jl_P4MvPQ/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
  [35d6a980] + ColorSchemes v3.31.0
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [d38c429a] + Contour v0.6.3
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [5732040d] + DelayEmbeddings v2.9.0
  [31c24e10] + Distributions v0.25.126
  [ffbed154] + DocStringExtensions v0.9.5
  [1a297f60] + FillArrays v1.16.0
⌅ [53c48c17] + FixedPointNumbers v0.8.6
  [34004b35] + HypergeometricFunctions v0.3.28
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.8.0
⌅ [2ab3a3ac] + LogExpFunctions v0.3.29
  [299715c1] + MarchingCubes v0.1.11
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.3
  [b8a86587] + NearestNeighbors v0.4.27
  [645ca80c] + Neighborhood v0.2.5
  [90014a1f] + PDMats v0.11.37
  [43287f4e] + PtrArrays v1.4.0
  [1fd47b50] + QuadGK v2.11.3
  [639c3291] + RecurrenceAnalysis v2.1.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.8.0
  [40b095a5] + StateSpaceSets v2.5.3
  [2913bbd2] + StatsBase v0.34.11
  [4c63d2b9] + StatsFuns v2.0.1
  [62fd8b95] + TensorCore v0.1.1
  [b8865327] + UnicodePlots v3.8.3
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.1.2
  [f43a241f] ~ Downloads ⇒ v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b27032c2] + LibCURL v1.0.0
  [ca575930] + NetworkOptions v1.3.0
  [4607b0f0] + SuiteSparse
  [cf7118a7] + UUIDs v1.11.0
  [deac9b47] + LibCURL_jll v8.20.0+1
  [29816b5a] + LibSSH2_jll v1.11.101+0
  [14a3606d] + MozillaCACerts_jll v2026.5.14
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.6+0
  [83775a58] + Zlib_jll v1.3.2+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850ede] + nghttp2_jll v1.69.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_P4MvPQ/Project.toml`
  [5732040d] DelayEmbeddings v2.9.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [86223c79] Graphs v1.14.0
  [639c3291] RecurrenceAnalysis v2.1.4
  [10745b16] Statistics v1.11.1
  [f43a241f] Downloads v1.7.0
  [37e2e46d] LinearAlgebra v1.14.0
  [9a3f8284] Random v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_P4MvPQ/Manifest.toml`
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
  [ec485272] ArnoldiMethod v0.4.0
  [35d6a980] ColorSchemes v3.31.0
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.1
  [d38c429a] Contour v0.6.3
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.5
  [5732040d] DelayEmbeddings v2.9.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.126
  [ffbed154] DocStringExtensions v0.9.5
  [1a297f60] FillArrays v1.16.0
⌅ [53c48c17] FixedPointNumbers v0.8.6
  [86223c79] Graphs v1.14.0
  [34004b35] HypergeometricFunctions v0.3.28
  [d25df0c9] Inflate v0.1.5
  [92d709cd] IrrationalConstants v0.2.6
  [692b3bcd] JLLWrappers v1.8.0
⌅ [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [299715c1] MarchingCubes v0.1.11
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.3
  [b8a86587] NearestNeighbors v0.4.27
  [645ca80c] Neighborhood v0.2.5
⌅ [bac558e1] OrderedCollections v1.8.2
  [90014a1f] PDMats v0.11.37
  [aea7be01] PrecompileTools v1.3.4
  [21216c6a] Preferences v1.5.2
  [43287f4e] PtrArrays v1.4.0
  [1fd47b50] QuadGK v2.11.3
  [639c3291] RecurrenceAnalysis v2.1.4
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [699a6c99] SimpleTraits v0.9.6
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.8.0
  [40b095a5] StateSpaceSets v2.5.3
  [90137ffa] StaticArrays v1.9.18
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.11
  [4c63d2b9] StatsFuns v2.0.1
  [62fd8b95] TensorCore v0.1.1
  [b8865327] UnicodePlots v3.8.3
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [b27032c2] LibCURL v1.0.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.14.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.13.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.5.2+0
  [deac9b47] LibCURL_jll v8.20.0+1
  [29816b5a] LibSSH2_jll v1.11.101+0
  [14a3606d] MozillaCACerts_jll v2026.5.14
  [4536629a] OpenBLAS_jll v0.3.33+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.6+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.2+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.69.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
running test file rmatrix_analytic.jl
running test file rqa_rna_analytic.jl
running test file skeletontest.jl
running test file windowtest.jl
Test Summary:            | Pass  Total     Time
RecurrenceAnalysis tests |  126    126  1m31.1s
     Testing RecurrenceAnalysis tests passed 

Testing completed after 115.32s

PkgEval succeeded after 179.73s