Package evaluation to load BioTools on Julia 1.14.0-DEV.2309 (6e1a27e459*) started at 2026-06-06T10:15:09.636 ################################################################################ # Set-up # Set-up completed after 0.13s ################################################################################ # Installation # Installing BioTools... Resolving package versions... Installed Combinatorics ─────── v0.7.0 Installed RecipesBase ───────── v0.8.0 Installed StringEncodings ───── v0.3.7 Installed CodecZlib ─────────── v0.7.8 Installed OrderedCollections ── v1.8.2 Installed TranscodingStreams ── v0.9.13 Installed DataStructures ────── v0.17.20 Installed Libz ──────────────── v1.0.1 Installed Twiddle ───────────── v1.1.2 Installed ColorTypes ────────── v0.9.1 Installed BioSymbols ────────── v3.1.0 Installed GenomicFeatures ───── v1.0.4 Installed BioTools ──────────── v1.2.0 Installed BufferedStreams ───── v1.2.2 Installed XML2_jll ──────────── v2.15.3+0 Installed YAML ──────────────── v0.4.16 Installed URIParser ─────────── v0.4.1 Installed FixedPointNumbers ─── v0.7.1 Installed Libiconv_jll ──────── v1.18.0+0 Installed BioCore ───────────── v2.0.5 Installed Polynomials ───────── v0.6.1 Installed Preferences ───────── v1.5.2 Installed EzXML ─────────────── v1.2.3 Installed JLLWrappers ───────── v1.8.0 Installed BioAlignments ─────── v1.0.1 Installed BGZFStreams ───────── v0.3.2 Installed IntervalTrees ─────── v1.1.0 Installed IndexableBitVectors ─ v1.0.0 Installed BioSequences ──────── v1.1.0 Installed Automa ────────────── v0.7.0 Installing 2 artifacts Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [fa51a905] + BioTools v1.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [67c07d97] + Automa v0.7.0 [28d598bf] + BGZFStreams v0.3.2 ⌅ [00701ae9] + BioAlignments v1.0.1 [37cfa864] + BioCore v2.0.5 ⌅ [7e6ae17a] + BioSequences v1.1.0 ⌅ [3c28c6f8] + BioSymbols v3.1.0 [fa51a905] + BioTools v1.2.0 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 ⌅ [3da002f7] + ColorTypes v0.9.1 ⌅ [861a8166] + Combinatorics v0.7.0 ⌅ [864edb3b] + DataStructures v0.17.20 [8f5d6c58] + EzXML v1.2.3 ⌅ [53c48c17] + FixedPointNumbers v0.7.1 ⌅ [899a7d2d] + GenomicFeatures v1.0.4 [1cb3b9ac] + IndexableBitVectors v1.0.0 [524e6230] + IntervalTrees v1.1.0 [692b3bcd] + JLLWrappers v1.8.0 [2ec943e9] + Libz v1.0.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [f27b6e38] + Polynomials v0.6.1 [21216c6a] + Preferences v1.5.2 ⌅ [3cdcf5f2] + RecipesBase v0.8.0 [69024149] + StringEncodings v0.3.7 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [7200193e] + Twiddle v1.1.2 [30578b45] + URIParser v0.4.1 [ddb6d928] + YAML v0.4.16 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.15.3+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.14.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.13.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.5.2+0 [4536629a] + OpenBLAS_jll v0.3.33+0 [83775a58] + Zlib_jll v1.3.2+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 13.57s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling project... 0.7 s ✓ RecipesBase 152.9 s ✓ OrderedCollections 137.1 s ✓ FixedPointNumbers 0.6 s ✓ Twiddle 92.1 s ✓ IntervalTrees 159.9 s ✓ BufferedStreams 1.2 s ✓ URIParser 2.9 s ✓ Preferences 1.7 s ✓ IndexableBitVectors 93.2 s ✓ TranscodingStreams 2.0 s ✓ Polynomials 65.4 s ✓ DataStructures 97.5 s ✓ ColorTypes 40.3 s ✓ Libz 3.3 s ✓ JLLWrappers 41.1 s ✓ CodecZlib 2.5 s ✓ Combinatorics 133.4 s ✓ Automa 3.5 s ✓ Libiconv_jll 39.1 s ✓ BGZFStreams WARNING: Constructor for type "Char" was extended in `BioSymbols` without explicit qualification or import.  NOTE: Assumed "Char" refers to `Base.Char`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Char end`.  Hint: To silence the warning, qualify `Char` as `Base.Char` in the method signature or explicitly `import Base: Char`. 140.2 s ✓ BioSymbols 50.5 s ✓ StringEncodings 3.8 s ✓ XML2_jll 71.6 s ✓ YAML 260.1 s ✓ EzXML 133.6 s ✓ BioCore WARNING: Constructor for type "UInt64" was extended in `BioSequences` without explicit qualification or import.  NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`.  Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. WARNING: method definition for BroadcastStyle at /home/pkgeval/.julia/packages/BioSequences/7i86L/src/search/pwm.jl:76 declares type variable T but does not use it. WARNING: method definition for BroadcastStyle at /home/pkgeval/.julia/packages/BioSequences/7i86L/src/search/pwm.jl:76 declares type variable S but does not use it. 330.1 s ✓ BioSequences 405.7 s ✓ GenomicFeatures ┌ Info: JuliaLowering threw given input: │ code = │ :(#= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:9 =# Core.@doc "Alignment of two sequences.\n" struct Alignment │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:13 =# │ anchors::Vector{AlignmentAnchor} │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:14 =# │ firstref::Int │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:15 =# │ lastref::Int │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:18 =# │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:18 =# @doc (" Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n"->begin │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:18 =# │ function Alignment(anchors::Vector{AlignmentAnchor}, check::Bool = true) │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:23 =# │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:25 =# │ if check │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:26 =# │ check_alignment_anchors(anchors) │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:30 =# │ firstref = 0 │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:31 =# │ for i = 1:length(anchors) │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:32 =# │ if ismatchop((anchors[i]).op) │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:33 =# │ firstref = (anchors[i - 1]).refpos + 1 │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:34 =# │ break │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:36 =# │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:38 =# │ lastref = 0 │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:39 =# │ for i = length(anchors):-1:1 │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:40 =# │ if ismatchop((anchors[i]).op) │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:41 =# │ lastref = (anchors[i]).refpos │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:42 =# │ break │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:44 =# │ end │ #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:46 =# │ return new(anchors, firstref, lastref) │ end │ end) │ end) │ st0 = │ SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source,__macro_ctx__ │ [macrocall] │ │ @doc :: Identifier │ mod │ :(#= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:9 =#) :: Value │ │ "Alignment of two sequences.\n" :: Value │ │ [struct] │ │ false :: Value │ │ Alignment :: Identifier │ │ [block] │ │ [::] │ │ anchors :: Identifier │ │ [curly] │ │ Vector :: Identifier │ │ AlignmentAnchor :: Identifier │ │ [::] │ │ firstref :: Identifier │ │ Int :: Identifier │ │ [::] │ │ lastref :: Identifier │ │ Int :: Identifier │ │ [macrocall] │ │ @doc :: Identifier │ │ :(#= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:18 =#) :: Value │ │ [->] │ │ " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" :: Value │ │ [block] │ │ [function] │ │ [call] │ │ Alignment :: Identifier │ │ [::] │ │ anchors :: Identifier │ │ [curly] │ │ Vector :: Identifier │ │ AlignmentAnchor :: Identifier │ │ [kw] │ │ [::] │ │ check :: Identifier │ │ Bool :: Identifier │ │ true :: Value │ │ [block] │ │ [if] │ │ check :: Identifier │ │ [block] │ │ [call] │ │ check_alignment_anchors :: Identifier │ │ anchors :: Identifier │ │ [=] │ │ firstref :: Identifier │ │ 0 :: Value │ │ [for] │ │ [=] │ │ i :: Identifier │ │ [call] │ │ : :: Identifier │ │ 1 :: Value │ │ [call] │ │ length :: Identifier │ │ anchors :: Identifier │ │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ firstref :: Identifier │ │ [call] │ │ + :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ [call] │ │ - :: Identifier │ │ i :: Identifier │ │ 1 :: Value │ │ [inert] │ │ refpos :: Identifier │ │ 1 :: Value │ │ [break] │ │ [=] │ │ lastref :: Identifier │ │ 0 :: Value │ │ [for] │ │ [=] │ │ i :: Identifier │ │ [call] │ │ : :: Identifier │ │ [call] │ │ length :: Identifier │ │ anchors :: Identifier │ │ -1 :: Value │ │ 1 :: Value │ │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ lastref :: Identifier │ │ [.] │ │ [ref] │ │ anchors :: Identifier │ │ i :: Identifier │ │ [inert] │ │ refpos :: Identifier │ │ [break] │ │ [return] │ │ [call] │ │ new :: Identifier │ │ anchors :: Identifier │ │ firstref :: Identifier │ │ lastref :: Identifier │ │ │ st1 = │ SyntaxTree with attributes mod,kind,var_id,toplevel_pure,scope_type,macro_source,name_val,syntax_flags,meta,scope_layer,value,jl_source,is_toplevel_thunk,source │ [block] │ │ [=] │ │ val :: Identifier │ scope_layer=3 │ [struct] │ │ false :: Value │ macro_source=122 │ Alignment :: Identifier │ scope_layer=1 │ [block] │ │ [::] │ │ anchors :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [::] │ │ firstref :: Identifier │ scope_layer=1 │ Int :: Identifier │ scope_layer=1 │ [::] │ │ lastref :: Identifier │ scope_layer=1 │ Int :: Identifier │ scope_layer=1 │ [block] │ │ [block] │ │ [=] │ │ #1#val :: Identifier │ scope_layer=1 │ [function] │ │ [call] │ │ Alignment :: Identifier │ scope_layer=1 │ [::] │ │ anchors :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [kw] │ │ [::] │ │ check :: Identifier │ scope_layer=1 │ Bool :: Identifier │ scope_layer=1 │ true :: Value │ macro_source=122 │ [block] │ │ [if] │ │ check :: Identifier │ scope_layer=1 │ [block] │ │ [call] │ │ check_alignment_anchors :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ [=] │ │ firstref :: Identifier │ scope_layer=1 │ 0 :: Value │ macro_source=122 │ [for] │ │ [=] │ │ i :: Identifier │ scope_layer=1 │ [call] │ │ : :: Identifier │ scope_layer=1 │ 1 :: Value │ macro_source=122 │ [call] │ │ length :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ firstref :: Identifier │ scope_layer=1 │ [call] │ │ + :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ [call] │ │ - :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ 1 :: Value │ macro_source=122 │ [inert] │ │ refpos :: Identifier │ │ 1 :: Value │ macro_source=122 │ [break] │ macro_source=122 │ [=] │ │ lastref :: Identifier │ scope_layer=1 │ 0 :: Value │ macro_source=122 │ [for] │ │ [=] │ │ i :: Identifier │ scope_layer=1 │ [call] │ │ : :: Identifier │ scope_layer=1 │ [call] │ │ length :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ -1 :: Value │ macro_source=122 │ 1 :: Value │ macro_source=122 │ [block] │ │ [if] │ │ [call] │ │ ismatchop :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ op :: Identifier │ │ [block] │ │ [=] │ │ lastref :: Identifier │ scope_layer=1 │ [.] │ │ [ref] │ │ anchors :: Identifier │ scope_layer=1 │ i :: Identifier │ scope_layer=1 │ [inert] │ │ refpos :: Identifier │ │ [break] │ macro_source=122 │ [return] │ │ [call] │ │ new :: Identifier │ scope_layer=1 │ anchors :: Identifier │ scope_layer=1 │ firstref :: Identifier │ scope_layer=1 │ lastref :: Identifier │ scope_layer=1 │ [call] │ │ Base.Docs.doc! :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [call] │ │ Base.Docs.Binding :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [inert] │ │ Alignment :: Identifier │ │ [call] │ macro_source=122 │ Base.Docs.docstr :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Core.svec :: Value │ macro_source=122 │ " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Dict{Symbol, Any} :: Value │ macro_source=122 │ :path => "/home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl" :: Value │ macro_source=122 │ :linenumber => 18 :: Value │ macro_source=122 │ :module => BioAlignments :: Value │ macro_source=122 │ [curly] │ │ Union :: Identifier │ scope_layer=1 │ [curly] │ │ Tuple :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ [curly] │ │ Tuple :: Identifier │ scope_layer=1 │ [curly] │ │ Vector :: Identifier │ scope_layer=1 │ AlignmentAnchor :: Identifier │ scope_layer=1 │ Bool :: Identifier │ scope_layer=1 │ #1#val :: Identifier │ scope_layer=1 │ [call] │ │ Base.Docs.doc! :: Value │ macro_source=122 │ BioAlignments :: Value │ macro_source=122 │ [call] │ │ Base.Docs.Binding :: Value │ macro_source=122 │ BioAlignments :: Value │ │ [inert] │ jl_source=L65 │ Alignment :: Identifier │ │ [call] │ │ Base.Docs.docstr :: Value │ macro_source=122 │ [call] │ macro_source=122 │ Core.svec :: Value │ macro_source=122 │ "Alignment of two sequences.\n" :: Value │ macro_source=122 │ [call] │ │ Dict{Symbol, Any} :: Value │ macro_source=122 │ :path => "/home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl" :: Value │ macro_source=122 │ :linenumber => 9 :: Value │ macro_source=122 │ :module => BioAlignments :: Value │ macro_source=122 │ [call] │ │ Pair :: Value │ macro_source=122 │ [inert] │ │ fields :: Identifier │ │ [call] │ macro_source=122 │ Dict{Symbol, Any} :: Value │ macro_source=122 │ [curly] │ │ Union :: Identifier │ scope_layer=1 │ val :: Identifier │ scope_layer=3 │ │ file = "/home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl" │ line = 9 └ mod = BioAlignments ERROR: LoadError: LoweringError: #= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:23 =# - assignment syntax in structure fields is reserved Expression:  (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref))))) Containing expressions:  (block (:: anchors (curly Vector AlignmentAnchor)) (:: firstref Int) (:: lastref Int) (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref))))) (call Base.Docs.doc! BioAlignments (call Base.Docs.Binding BioAlignments :Alignment) (call Base.Docs.docstr (call Core.svec " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n") (call Dict{Symbol, Any} :path => "/home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl" :linenumber => 18 :module => BioAlignments)) (curly Union (curly Tuple (curly Vector AlignmentAnchor)) (curly Tuple (curly Vector AlignmentAnchor) Bool))) #1#val)  Detailed provenance:  (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (iteration (in i (call : 1 (call length anchors)))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= firstref (call + (. (ref anchors (call - i 1)) :refpos) 1)) (break))))) (= lastref 0) (for (iteration (in i (call : (call length anchors) -1 1))) (block (if (call ismatchop (. (ref anchors i) :op)) (block (= lastref (. (ref anchors i) :refpos)) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref)))))  └─ (= #1#val (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref)))))  ├─ @ /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:23  └─ (macrocall @doc :(#= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:9 =#) "Alignment of two sequences.\n" (struct false Alignment (block (:: anchors (curly Vector AlignmentAnchor)) (:: firstref Int) (:: lastref Int) (macrocall @doc :(#= /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:18 =#) (-> " Alignment(anchors::Vector{AlignmentAnchor}, check=true)\n\nCreate an alignment object from a sequence of alignment anchors.\n" (block (function (call Alignment (:: anchors (curly Vector AlignmentAnchor)) (kw (:: check Bool) true)) (block (if check (block (call check_alignment_anchors anchors))) (= firstref 0) (for (= i (call : 1 (call length anchors))) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= firstref (call + (. (ref anchors (call - i 1)) (inert refpos)) 1)) (break))))) (= lastref 0) (for (= i (call : (call length anchors) -1 1)) (block (if (call ismatchop (. (ref anchors i) (inert op))) (block (= lastref (. (ref anchors i) (inert refpos))) (break))))) (return (call new anchors firstref lastref))))))))))  └─ @ /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:9  Stacktrace:  [1] _collect_struct_fields(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, field_names::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_types::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_attrs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, field_docs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, inner_defs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, Vector{Int64}}, exs::Base.JuliaSyntax.SyntaxList{Dict{Symbol, Dict{Int64, Any}}, SubArray{Int64, 1, Vector{Int64}, Tuple{UnitRange{Int64}}, true}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:3166  [2] expand_struct_def(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:3736  [3] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4317  [4] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133  [5] expand_assignment(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, is_const::Bool)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:1320  [6] expand_assignment(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:1270  [7] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4177  [8] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133 [inlined]  [9] (::Base.JuliaLowering.var"#expand_forms_2##2#expand_forms_2##3"{Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}})(e::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4421 [inlined]  [10] mapchildren(f::Base.JuliaLowering.var"#expand_forms_2##2#expand_forms_2##3"{Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}}, ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaSyntax /source/usr/share/julia/JuliaSyntax/src/porcelain/syntax_graph.jl:707  [11] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}}, docs::Nothing)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4421  [12] expand_forms_2(ctx::Base.JuliaLowering.DesugaringContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4133 [inlined]  [13] expand_forms_2(ctx::Base.JuliaLowering.MacroExpansionContext{Dict{Symbol, Dict{Int64, Any}}}, ex::Base.JuliaSyntax.SyntaxTree{Dict{Symbol, Dict{Int64, Any}}})  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/desugaring.jl:4450  [14] core_lowering_hook(code::Any, mod::Module, file::String, line::UInt64, world::UInt64, _warn::Bool)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/hooks.jl:30  [15] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:327  [16] top-level scope  @ ~/.julia/packages/BioAlignments/FOisL/src/BioAlignments.jl:97  [17] include(mod::Module, _path::String)  @ Base Base.jl:326  [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3296  [19] top-level scope  @ stdin:5  [20] eval(m::Module, e::Any)  @ Core boot.jl:521  [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [22] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [23] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [24] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/alignment.jl:9 in expression starting at /home/pkgeval/.julia/packages/BioAlignments/FOisL/src/BioAlignments.jl:3 in expression starting at stdin:5 ✗ BioAlignments ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("00701ae9-d1dc-5365-b64a-a3a3ebf5695e"), "BioAlignments") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base loading.jl:2837  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base loading.jl:2685  [4] macro expansion  @ loading.jl:2599 [inlined]  [5] macro expansion  @ lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base loading.jl:2563  [7] require(into::Module, mod::Symbol)  @ Base loading.jl:2539 [inlined]  [8] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)  @ Base module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base module.jl:60  [10] _eval_import(imported::Bool, to::Module, from::Expr, paths::Expr)  @ Base module.jl:101  [11] eval_import(imported::Bool, to::Module, from::Expr, paths::Expr)  @ Base.JuliaLowering /source/usr/share/julia/JuliaLowering/src/runtime.jl:195  [12] top-level scope  @ ~/.julia/packages/BioTools/LY7H3/src/blast/BLAST.jl:14  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base Base.jl:327  [14] top-level scope  @ ~/.julia/packages/BioTools/LY7H3/src/BioTools.jl:7  [15] include(mod::Module, _path::String)  @ Base Base.jl:326  [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base loading.jl:3296  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core boot.jl:521  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base loading.jl:3132  [20] include_string(m::Module, txt::String, fname::String)  @ Base loading.jl:3142 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base client.jl:353  [22] _start()  @ Base client.jl:596 in expression starting at /home/pkgeval/.julia/packages/BioTools/LY7H3/src/blast/BLAST.jl:6 in expression starting at /home/pkgeval/.julia/packages/BioTools/LY7H3/src/BioTools.jl:1 in expression starting at stdin:5 ✗ BioTools 28 dependencies successfully precompiled in 2627 seconds. 13 already precompiled. 2 dependencies had output during precompilation: ┌ BioSequences │ WARNING: Constructor for type "UInt64" was extended in `BioSequences` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. │ WARNING: method definition for BroadcastStyle at /home/pkgeval/.julia/packages/BioSequences/7i86L/src/search/pwm.jl:76 declares type variable T but does not use it. │ WARNING: method definition for BroadcastStyle at /home/pkgeval/.julia/packages/BioSequences/7i86L/src/search/pwm.jl:76 declares type variable S but does not use it. └ ┌ BioSymbols │ WARNING: Constructor for type "Char" was extended in `BioSymbols` without explicit qualification or import. │ NOTE: Assumed "Char" refers to `Base.Char`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Char end`. │ Hint: To silence the warning, qualify `Char` as `Base.Char` in the method signature or explicitly `import Base: Char`. └ Precompilation completed after 2646.45s ################################################################################ # Loading # Loading BioTools...  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 146 running 1 of 1  signal (10): User defined signal 1 _ZN4llvm10DILocation7getImplERNS_11LLVMContextEjjPNS_8MetadataES4_bmhNS3_11StorageTypeEb at /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl (unknown line) getImpl at /source/usr/include/llvm/IR/DebugInfoMetadata.h:2529:19 [inlined] get at /source/usr/include/llvm/IR/DebugInfoMetadata.h:2574:3 [inlined] operator() at /source/src/codegen.cpp:9465:55 operator() at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/std_function.h:690:14 [inlined] operator() at /source/src/codegen.cpp:9399:41 operator() at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/std_function.h:690:14 [inlined] operator() at /source/src/codegen.cpp:9480:39 [inlined] emit_function at /source/src/codegen.cpp:9663:47 jl_emit_code at /source/src/codegen.cpp:10230:67 jl_emit_codeinst at /source/src/codegen.cpp:10295:93 jl_emit_codeinsts_to_jit_impl at /source/src/jitlayers.cpp:472:49 add_codeinsts_to_jit! at ./../usr/share/julia/Compiler/src/typeinfer.jl:1736:0 (pc: 375) typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1742:0 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1750:0 (pc: 17) jfptr_typeinf_ext_toplevel_2.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] jl_type_infer at /source/src/gf.c:463:35 jl_compile_method_internal at /source/src/gf.c:3665:24 _jl_invoke at /source/src/gf.c:4130:16 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] ijl_lower at /source/src/ast.c:1274:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:598:31 jl_eval_module_expr at /source/src/toplevel.c:263:5 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:665:27 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 _include at ./loading.jl:3192:0 (pc: 122) include at ./Base.jl:326:0 (pc: 1) include_package_for_output at ./loading.jl:3296:0 (pc: 837) jfptr_include_package_for_output_1.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] do_call at /source/src/interpreter.c:123:26 eval_value at /source/src/interpreter.c:243:16 eval_stmt_value at /source/src/interpreter.c:194:23 [inlined] eval_body at /source/src/interpreter.c:706:13 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897:21 ijl_eval_thunk at /source/src/toplevel.c:768:18 jl_toplevel_eval_flex at /source/src/toplevel.c:712:26 jl_eval_toplevel_stmts at /source/src/toplevel.c:602:15 jl_toplevel_eval_flex at /source/src/toplevel.c:684:27 ijl_toplevel_eval at /source/src/toplevel.c:782:12 ijl_toplevel_eval_in at /source/src/toplevel.c:827:13 eval at ./boot.jl:521:0 (pc: 1) include_string at ./loading.jl:3132:0 (pc: 207) include_string at ./loading.jl:3142:0 [inlined] exec_options at ./client.jl:353:0 (pc: 841) _start at ./client.jl:596:0 (pc: 294) jfptr__start_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] true_main at /source/src/jlapi.c:971:29 jl_repl_entrypoint at /source/src/jlapi.c:1138:15 main at /source/cli/loader_exe.c:58:15 unknown function (ip: 0x78d93bbee249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)   ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 143 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d7833d73d00 Total snapshots: 354. Utilization: 0% ╎354 @Base/task.jl:1168 wait_forever() 353╎ 354 @Base/task.jl:1246 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007b666e9890f0 Total snapshots: 403. Utilization: 0% ╎403 @Base/task.jl:1168 wait_forever() 402╎ 403 @Base/task.jl:1246 wait() [143] signal 15: Terminated in expression starting at none:1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430:0 ijl_task_get_next at /source/src/scheduler.c:457:34 wait at ./task.jl:1246:0 (pc: 107) wait_forever at ./task.jl:1168:0 (pc: 4) jfptr_wait_forever_0.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4138:23 [inlined] ijl_apply_generic at /source/src/gf.c:4364:12 jl_apply at /source/src/julia.h:2388:12 [inlined] start_task at /source/src/task.c:1275:19 unknown function (ip: (nil)) at (unknown file) Allocations: 2032036 (Pool: 2032003; Big: 33); GC: 3 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:56:0 (pc: 6) #schedule#623 at ./task.jl:1051:0 (pc: 71) schedule at ./task.jl:1043:0 [inlined] uv_writecb_task at ./stream.jl:1198:0 (pc: 11) jlcapi_uv_writecb_task_643.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926:0 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227:0 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824:0 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420:0 ijl_process_events at /source/src/jl_uv.c:397:21 process_events at ./libuv.jl:133:0 [inlined] wait at ./task.jl:1233:0 (pc: 15) PkgEval terminated after 2730.69s: test duration exceeded the time limit