Package evaluation of SymFEL on Julia 1.12.0-beta3.42 (6ab22e4f28*) started at 2025-06-02T13:11:20.933


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.07s


################################################################################
# Installation
#

Installing SymFEL...
   Resolving package versions...
   Installed IrrationalConstants ─ v0.2.4
   Installed Conda ─────────────── v1.10.2
   Installed Parsers ───────────── v2.8.3
   Installed Preferences ───────── v1.4.3
   Installed SpecialFunctions ──── v2.5.1
   Installed JSON ──────────────── v0.21.4
   Installed Latexify ──────────── v0.16.8
   Installed Format ────────────── v1.3.7
   Installed JLLWrappers ───────── v1.7.0
   Installed OrderedCollections ── v1.8.1
   Installed PyCall ────────────── v1.96.4
   Installed RecipesBase ───────── v1.3.4
   Installed PrecompileTools ───── v1.3.2
   Installed SymPy ─────────────── v1.2.1
   Installed VersionParsing ────── v1.3.0
   Installed LaTeXStrings ──────── v1.4.0
   Installed Requires ──────────── v1.3.1
   Installed LogExpFunctions ───── v0.3.29
   Installed MacroTools ────────── v0.5.16
   Installed OpenSpecFun_jll ───── v0.5.6+0
   Installed CommonSolve ───────── v0.2.4
   Installed CommonEq ──────────── v0.2.0
   Installed DocStringExtensions ─ v0.9.4
   Installed SymFEL ────────────── v0.3.0
  Installing 1 artifacts
   Installed artifact OpenSpecFun 194.9 KiB
    Updating `~/.julia/environments/v1.12/Project.toml`
  [98344202] + SymFEL v0.3.0
    Updating `~/.julia/environments/v1.12/Manifest.toml`
⌅ [3709ef60] + CommonEq v0.2.0
  [38540f10] + CommonSolve v0.2.4
  [8f4d0f93] + Conda v1.10.2
  [ffbed154] + DocStringExtensions v0.9.4
  [1fa38f19] + Format v1.3.7
  [92d709cd] + IrrationalConstants v0.2.4
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [23fbe1c1] + Latexify v0.16.8
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [438e738f] + PyCall v1.96.4
  [3cdcf5f2] + RecipesBase v1.3.4
  [ae029012] + Requires v1.3.1
  [276daf66] + SpecialFunctions v2.5.1
  [98344202] + SymFEL v0.3.0
⌅ [24249f21] + SymPy v1.2.1
  [81def892] + VersionParsing v1.3.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.11.1+1
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.5.0+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.64.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
    Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log`
    Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log`

Installation completed after 101.55s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5354.4 ms  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 25 already precompiled.

Precompiling package dependencies...

Precompilation completed after 169.18s


################################################################################
# Testing
#

     Testing SymFEL
      Status `/tmp/jl_dJ1arb/Project.toml`
  [98344202] SymFEL v0.3.0
⌅ [24249f21] SymPy v1.2.1
  [37e2e46d] LinearAlgebra v1.12.0
  [2f01184e] SparseArrays v1.12.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_dJ1arb/Manifest.toml`
⌅ [3709ef60] CommonEq v0.2.0
  [38540f10] CommonSolve v0.2.4
  [8f4d0f93] Conda v1.10.2
  [ffbed154] DocStringExtensions v0.9.4
  [1fa38f19] Format v1.3.7
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [23fbe1c1] Latexify v0.16.8
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.4.3
  [438e738f] PyCall v1.96.4
  [3cdcf5f2] RecipesBase v1.3.4
  [ae029012] Requires v1.3.1
  [276daf66] SpecialFunctions v2.5.1
  [98344202] SymFEL v0.3.0
⌅ [24249f21] SymPy v1.2.1
  [81def892] VersionParsing v1.3.0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.11.1+1
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.5.20
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.5.0+0
  [bea87d4a] SuiteSparse_jll v7.8.3+2
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
  [8e850ede] nghttp2_jll v1.64.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
# Testing Lagrange elements
# Testing Hermite elements
n = 2
ErrorException("The degree of Hermite polynomials should be odd and >= 3")
Testing get_em() function.
ErrorException("Only Lagrange and Hermite FEM are implemented.")
ErrorException("The third argument should verify der1 ∈ [0, …, deg1]...")
ErrorException("The fourth parameter should verify der2 ∈ [0, …, deg2]...")
ErrorException("The third parameter should verify der1 ∈ [0, …,int(deg1 / 2 + 1)]...")
ErrorException("The fourth parameter should verify der2 ∈ [0, …,int(deg2 / 2 + 1)]...")

[469] signal 11 (1): Segmentation fault
in expression starting at /home/pkgeval/.julia/packages/SymFEL/Gz8D0/test/runtests.jl:135
_PyInterpreterState_GET at /usr/local/src/conda/python-3.12.10/Include/internal/pycore_pystate.h:133 [inlined]
get_gc_state at /usr/local/src/conda/python-3.12.10/Modules/gcmodule.c:134 [inlined]
PyObject_GC_Del at /usr/local/src/conda/python-3.12.10/Modules/gcmodule.c:2421
pydecref_ at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:118 [inlined]
pydecref at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:123
unknown function (ip: 0x73587c5cde35) at (unknown file)
_jl_invoke at /source/src/gf.c:3541 [inlined]
ijl_apply_generic at /source/src/gf.c:3741
run_finalizer at /source/src/gc-common.c:180
jl_gc_run_finalizers_in_list at /source/src/gc-common.c:270
run_finalizers at /source/src/gc-common.c:316
finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:210
jfptr_finish_nocycle_120960.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3541 [inlined]
ijl_apply_generic at /source/src/gf.c:3741
typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4456
typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1231
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1400 [inlined]
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1408
jfptr_typeinf_ext_toplevel_120871.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:3541 [inlined]
ijl_apply_generic at /source/src/gf.c:3741
jl_apply at /source/src/julia.h:2369 [inlined]
jl_type_infer at /source/src/gf.c:453
jl_compile_method_internal at /source/src/gf.c:3037
_jl_invoke at /source/src/gf.c:3533 [inlined]
ijl_apply_generic at /source/src/gf.c:3741
jl_apply at /source/src/julia.h:2369 [inlined]
start_task at /source/src/task.c:1249
Allocations: 19911365 (Pool: 19911209; Big: 156); GC: 14

Testing failed after 57.37s

ERROR: LoadError: Package SymFEL errored during testing (received signal: 11)
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:321
 [12] _start()
    @ Base ./client.jl:554
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval crashed after 360.48s: GC corruption was detected