Package evaluation to test WaterLily on Julia 1.13.0-alpha2.30 (5abf758bb1*) started at 2026-01-09T02:41:09.514 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.86s ################################################################################ # Installation # Installing WaterLily... Resolving package versions... Installed CommonWorldInvalidations ─ v1.0.0 Installed Adapt ──────────────────── v4.4.0 Installed MacroTools ─────────────── v0.5.16 Installed DiffResults ────────────── v1.1.0 Installed EllipsisNotation ───────── v1.8.0 Installed ArrayInterface ─────────── v7.22.0 Installed ForwardDiff ────────────── v1.3.1 Installed Compat ─────────────────── v4.18.1 Installed CommonSubexpressions ───── v0.3.1 Installed Atomix ─────────────────── v1.1.2 Installed StaticArraysCore ───────── v1.4.4 Installed LoggingExtras ──────────── v1.2.0 Installed StaticArrays ───────────── v1.9.16 Installed PrecompileTools ────────── v1.3.3 Installed WaterLily ──────────────── v1.5.2 Installed IrrationalConstants ────── v0.2.6 Installed SciMLPublic ────────────── v1.0.1 Installed NaNMath ────────────────── v1.1.3 Installed StaticArrayInterface ───── v1.8.0 Installed Requires ───────────────── v1.3.1 Installed OpenSpecFun_jll ────────── v0.5.6+0 Installed LogExpFunctions ────────── v0.3.29 Installed DiffRules ──────────────── v1.15.1 Installed IfElse ─────────────────── v0.1.1 Installed UnsafeAtomics ──────────── v0.3.0 Installed Reexport ───────────────── v1.2.2 Installed KernelAbstractions ─────── v0.9.39 Installed SpecialFunctions ───────── v2.6.1 Installed Preferences ────────────── v1.5.1 Installed Static ─────────────────── v1.3.1 Installed JLLWrappers ────────────── v1.7.1 Installed DocStringExtensions ────── v0.9.5 Installing 1 artifacts Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [ed894a53] + WaterLily v1.5.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [da5c29d0] + EllipsisNotation v1.8.0 [f6369f11] + ForwardDiff v1.3.1 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.39 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [77ba4419] + NaNMath v1.1.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [431bcebd] + SciMLPublic v1.0.1 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [013be700] + UnsafeAtomics v0.3.0 [ed894a53] + WaterLily v1.5.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 7.88s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4932.9 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.13/activate_set.jl:78 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ `AMDGPU=21141c5a-9bdb-4563-92ae-f87d6854732e` depends on `LLD_jll=d55e3150-da41-5e91-b323-ecfd1eec6109`, but no such entry exists in the manifest. │ Stacktrace: │ [1] pkgerror(::String, ::Vararg{String}) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 │ [2] validate_manifest(julia_version::VersionNumber, project_hash::Base.SHA1, manifest_format::VersionNumber, stage1::Dict{String, Vector{Pkg.Types.Stage1}}, other::Dict{String, Any}, registries::Dict{String, Pkg.Types.ManifestRegistryEntry}) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:198 │ [3] Pkg.Types.Manifest(raw::Dict{String, Any}, f_or_io::String) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:295 │ [4] read_manifest(f_or_io::String) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:318 │ [5] Pkg.Types.EnvCache(env::Nothing) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:452 │ [6] EnvCache │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:419 [inlined] │ [7] #show_update#282 │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:3559 [inlined] │ [8] kwcall(::@NamedTuple{io::Base.DevNull, hidden_upgrades_info::Bool}, ::typeof(Pkg.Operations.show_update), env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:3558 │ [9] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2441 │ [10] up │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2408 [inlined] │ [11] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:465 │ [12] up │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:433 [inlined] │ [13] up │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:177 [inlined] │ [14] #resolve#170 │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:471 [inlined] │ [15] resolve │ @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:470 [inlined] │ [16] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.13/activate_set.jl:83 │ [17] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.13/activate_set.jl:9 │ [18] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [19] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [20] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [21] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4618.0 ms ✓ MacroTools 792.2 ms ✓ Reexport 941.3 ms ✓ SciMLPublic 2212.8 ms ✓ IrrationalConstants 828.5 ms ✓ CommonWorldInvalidations 982.8 ms ✓ StaticArraysCore 1195.3 ms ✓ Requires 3651.4 ms ✓ UnsafeAtomics 1166.0 ms ✓ DocStringExtensions 806.4 ms ✓ IfElse 1024.3 ms ✓ NaNMath 1100.9 ms ✓ LoggingExtras 1215.2 ms ✓ Compat 1181.0 ms ✓ Preferences 2059.0 ms ✓ CommonSubexpressions 1067.5 ms ✓ DiffResults 978.4 ms ✓ Adapt 1381.8 ms ✓ Atomix 1636.0 ms ✓ LogExpFunctions 1129.6 ms ✓ Compat → CompatLinearAlgebraExt 1233.7 ms ✓ JLLWrappers 1013.8 ms ✓ PrecompileTools 1180.5 ms ✓ ArrayInterface 1492.6 ms ✓ OpenSpecFun_jll 14361.8 ms ✓ StaticArrays 5385.0 ms ✓ Static 757.4 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 5053.6 ms ✓ SpecialFunctions 1308.4 ms ✓ Adapt → AdaptStaticArraysExt 8746.6 ms ✓ StaticArrayInterface 1235.1 ms ✓ DiffRules 8988.9 ms ✓ KernelAbstractions 1646.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1025.0 ms ✓ EllipsisNotation 7231.9 ms ✓ ForwardDiff 2028.6 ms ✓ KernelAbstractions → LinearAlgebraExt 1736.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 14136.1 ms ✓ WaterLily 38 dependencies successfully precompiled in 109 seconds. 12 already precompiled. 1 dependency had output during precompilation: ┌ WaterLily │ ┌ Warning: Using WaterLily in serial (ie. JULIA_NUM_THREADS=1) is not recommended because it defaults to serial CPU execution. │ │ Use JULIA_NUM_THREADS=auto, or any number of threads greater than 1, to allow multi-threading in CPU backends. │ │ For a low-overhead single-threaded CPU only backend set: WaterLily.set_backend("SIMD") │ └ @ WaterLily ~/.julia/packages/WaterLily/O8g3K/src/WaterLily.jl:180 └ Precompilation completed after 162.16s ################################################################################ # Testing # Testing WaterLily Testing failed after 10.98s ERROR: LoadError: `AMDGPU=21141c5a-9bdb-4563-92ae-f87d6854732e` depends on `LLD_jll=d55e3150-da41-5e91-b323-ecfd1eec6109`, but no such entry exists in the manifest. Stacktrace: [1] pkgerror(::String, ::Vararg{String}) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] validate_manifest(julia_version::VersionNumber, project_hash::Base.SHA1, manifest_format::VersionNumber, stage1::Dict{String, Vector{Pkg.Types.Stage1}}, other::Dict{String, Any}, registries::Dict{String, Pkg.Types.ManifestRegistryEntry}) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:198 [3] Pkg.Types.Manifest(raw::Dict{String, Any}, f_or_io::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:295 [4] read_manifest(f_or_io::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/manifest.jl:318 [5] Pkg.Types.EnvCache(env::Nothing) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:452 [6] EnvCache @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:419 [inlined] [7] #show_update#282 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:3559 [inlined] [8] kwcall(::@NamedTuple{io::Base.DevNull, hidden_upgrades_info::Bool}, ::typeof(Pkg.Operations.show_update), env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:3558 [9] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2441 [10] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2408 [inlined] [11] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:465 [12] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:433 [inlined] [13] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:177 [inlined] [14] #resolve#170 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:471 [inlined] [15] resolve @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:470 [inlined] [16] (::Pkg.Operations.var"#215#216"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#230#231"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2758 [17] with_temp_env(fn::Pkg.Operations.var"#215#216"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#230#231"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2628 [18] (::Pkg.Operations.var"#211#212"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#230#231"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2742 [19] mktempdir(fn::Pkg.Operations.var"#211#212"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#230#231"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:936 [20] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:932 [21] #sandbox#207 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2689 [inlined] [22] kwcall(::@NamedTuple{preferences::Dict{String, Any}, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool}, ::typeof(Pkg.Operations.sandbox), fn::Function, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override::Pkg.Types.Project) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2679 [23] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2953 [24] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2859 [inlined] [25] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:572 [26] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548 [27] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172 [28] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161 [29] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [30] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined] [31] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159 [32] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [33] include(mod::Module, _path::String) @ Base ./Base.jl:309 [34] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [35] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 229.93s: there were unidentified errors