Package evaluation to test OceanBioME on Julia 1.13.0-alpha2.30 (5abf758bb1*) started at 2026-01-09T11:54:34.273 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.02s ################################################################################ # Installation # Installing OceanBioME... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed LLVMExtra_jll ─────────────── v0.0.38+0 Installed Glob ──────────────────────── v1.4.0 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.19.3 Installed Quaternions ───────────────── v0.7.7 Installed MPI ───────────────────────── v0.20.23 Installed JLD2 ──────────────────────── v0.6.3 Installed NVTX ──────────────────────── v1.0.2 Installed Adapt ─────────────────────── v4.4.0 Installed InlineStrings ─────────────── v1.4.5 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed ConstructionBase ──────────── v1.6.0 Installed GPUCompiler ───────────────── v1.7.5 Installed PkgVersion ────────────────── v0.3.3 Installed LibTracyClient_jll ────────── v0.13.1+0 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed CUDA_Compiler_jll ─────────── v0.4.1+0 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed ReactantCore ──────────────── v0.1.16 Installed SeawaterPolynomials ───────── v0.3.10 Installed demumble_jll ──────────────── v1.3.0+0 Installed ExpressionExplorer ────────── v1.1.3 Installed ExprTools ─────────────────── v0.1.10 Installed Random123 ─────────────────── v1.7.1 Installed Krylov ────────────────────── v0.10.3 Installed OrderedCollections ────────── v1.8.1 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed HashArrayMappedTries ──────── v0.2.0 Installed Compat ────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed NVTX_jll ──────────────────── v3.2.2+0 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed CUDA ──────────────────────── v5.9.6 Installed Atomix ────────────────────── v1.1.2 Installed RandomNumbers ─────────────── v1.6.0 Installed GPUArrays ─────────────────── v11.3.3 Installed PrecompileTools ───────────── v1.3.3 Installed StatsAPI ──────────────────── v1.8.0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed StructArrays ──────────────── v0.7.2 Installed DataValueInterfaces ───────── v1.0.0 Installed CEnum ─────────────────────── v0.5.0 Installed SentinelArrays ────────────── v1.4.9 Installed Colors ────────────────────── v0.13.1 Installed OffsetArrays ──────────────── v1.17.0 Installed FileIO ────────────────────── v1.17.1 Installed StaticArrays ──────────────── v1.9.16 Installed StaticArraysCore ──────────── v1.4.4 Installed JuliaNVTXCallbacks_jll ────── v0.2.1+0 Installed CubedSphere ───────────────── v0.3.4 Installed RealDot ───────────────────── v0.1.0 Installed CUDA_Runtime_jll ──────────── v0.19.2+0 Installed GPUArraysCore ─────────────── v0.2.0 Installed CUDA_Runtime_Discovery ────── v1.0.0 Installed Distances ─────────────────── v0.10.12 Installed AbstractFFTs ──────────────── v1.5.0 Installed ColorTypes ────────────────── v0.12.1 Installed StringManipulation ────────── v0.4.2 Installed Requires ──────────────────── v1.3.1 Installed Tracy ─────────────────────── v0.1.6 Installed LLVM ──────────────────────── v9.4.4 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed OpenMPI_jll ───────────────── v5.0.9+0 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed KernelAbstractions ────────── v0.9.39 Installed GibbsSeaWater ─────────────── v0.1.4 Installed PrettyTables ──────────────── v3.1.2 Installed CUDA_Driver_jll ───────────── v13.1.0+0 Installed ScopedValues ──────────────── v1.5.0 Installed UnsafeAtomics ─────────────── v0.3.0 Installed MuladdMacro ───────────────── v0.2.4 Installed Tables ────────────────────── v1.12.1 Installed XML2_jll ──────────────────── v2.13.9+0 Installed GPUToolbox ────────────────── v1.0.0 Installed Reexport ──────────────────── v1.2.2 Installed Scratch ───────────────────── v1.3.0 Installed Preferences ───────────────── v1.5.1 Installed DataFrames ────────────────── v1.8.1 Installed OceanBioME ────────────────── v0.16.7 Installed FixedPointNumbers ─────────── v0.8.5 Installed MPIPreferences ────────────── v0.1.11 Installed Missings ──────────────────── v1.2.0 Installed PooledArrays ──────────────── v1.4.3 Installed FFTW ──────────────────────── v1.10.0 Installed Oceananigans ──────────────── v0.103.1 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed TaylorSeries ──────────────── v0.20.10 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed Rotations ─────────────────── v1.7.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed BFloat16s ─────────────────── v0.6.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed ChunkCodecCore ────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed LLVMLoopInfo ──────────────── v1.0.0 Installed DocStringExtensions ───────── v0.9.5 Installed GibbsSeaWater_jll ─────────── v3.5.2+0 Installing 14 artifacts Installed artifact JuliaNVTXCallbacks 8.6 KiB Installed artifact NVTX 13.7 KiB Installed artifact FFTW 2.2 MiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact Libiconv 1.9 MiB Installed artifact GibbsSeaWater 1.7 MiB Installed artifact LLVMExtra 3.2 MiB Installed artifact MPICH 3.3 MiB Installed artifact Hwloc 3.5 MiB Installed artifact LibTracyClient 502.2 KiB Installed artifact demumble 322.0 KiB Installed artifact XML2 2.5 MiB Installed artifact CUDA_Compiler 125.2 MiB Installed artifact CUDA_Driver 135.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [a49af516] + OceanBioME v0.16.7 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.4.0 [a9b6321e] + Atomix v1.1.2 [ab4f0b2a] + BFloat16s v0.6.0 [fa961155] + CEnum v0.5.0 [052768ef] + CUDA v5.9.6 [1af6417a] + CUDA_Runtime_Discovery v1.0.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [7445602f] + CubedSphere v0.3.4 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [21656369] + ExpressionExplorer v1.1.3 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [53c48c17] + FixedPointNumbers v0.8.5 [0c68f7d7] + GPUArrays v11.3.3 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.7.5 [096a3bc2] + GPUToolbox v1.0.0 [9a22fb26] + GibbsSeaWater v0.1.4 [c27321d9] + Glob v1.4.0 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.39 [ba0b0d4f] + Krylov v0.10.3 [929cbde3] + LLVM v9.4.4 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [da04e1cc] + MPI v0.20.23 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [5da4648a] + NVTX v1.0.2 [a49af516] + OceanBioME v0.16.7 [9e8cae18] + Oceananigans v0.103.1 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [eebad327] + PkgVersion v0.3.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [94ee1d12] + Quaternions v0.7.7 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [a3311ec8] + ReactantCore v0.1.16 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [d496a93d] + SeawaterPolynomials v0.3.10 [91c51154] + SentinelArrays v1.4.9 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [892a3eda] + StringManipulation v0.4.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [6aa5eb33] + TaylorSeries v0.20.10 [e689c965] + Tracy v0.1.6 [013be700] + UnsafeAtomics v0.3.0 [d1e2174e] + CUDA_Compiler_jll v0.4.1+0 [4ee394cb] + CUDA_Driver_jll v13.1.0+0 [76a88914] + CUDA_Runtime_jll v0.19.2+0 [f5851436] + FFTW_jll v3.3.11+0 [6727f6b2] + GibbsSeaWater_jll v3.5.2+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] + LLVMExtra_jll v0.0.38+0 [ad6e5548] + LibTracyClient_jll v0.13.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] + NVTX_jll v3.2.2+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [1e29f10c] + demumble_jll v1.3.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building GibbsSeaWater → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/f4318e7a751703a5db8b57c112e5cd5c218d296b/build.log` Installation completed after 53.6s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4776.7 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 846.75s ################################################################################ # Testing # Testing OceanBioME Status `/tmp/jl_UQPTdr/Project.toml` [79e6a3ab] Adapt v4.4.0 [a9b6321e] Atomix v1.1.2 [052768ef] CUDA v5.9.6 [124859b0] DataDeps v0.7.13 [e30172f5] Documenter v1.16.1 [9a22fb26] GibbsSeaWater v0.1.4 [033835bb] JLD2 v0.6.3 [63c18a36] KernelAbstractions v0.9.39 [a49af516] OceanBioME v0.16.7 [9e8cae18] Oceananigans v0.103.1 [6fe1bfb0] OffsetArrays v1.17.0 [d496a93d] SeawaterPolynomials v0.3.10 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_UQPTdr/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [a9b6321e] Atomix v1.1.2 [ab4f0b2a] BFloat16s v0.6.0 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [052768ef] CUDA v5.9.6 [1af6417a] CUDA_Runtime_Discovery v1.0.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [7445602f] CubedSphere v0.3.4 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [21656369] ExpressionExplorer v1.1.3 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [53c48c17] FixedPointNumbers v0.8.5 [0c68f7d7] GPUArrays v11.3.3 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.7.5 [096a3bc2] GPUToolbox v1.0.0 [9a22fb26] GibbsSeaWater v0.1.4 [d7ba0133] Git v1.5.0 [c27321d9] Glob v1.4.0 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [b5f81e59] IOCapture v1.0.0 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [63c18a36] KernelAbstractions v0.9.39 [ba0b0d4f] Krylov v0.10.3 [929cbde3] LLVM v9.4.4 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [e6f89c97] LoggingExtras v1.2.0 [da04e1cc] MPI v0.20.23 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [46d2c3a1] MuladdMacro v0.2.4 [5da4648a] NVTX v1.0.2 [a49af516] OceanBioME v0.16.7 [9e8cae18] Oceananigans v0.103.1 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [94ee1d12] Quaternions v0.7.7 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [a3311ec8] ReactantCore v0.1.16 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [d496a93d] SeawaterPolynomials v0.3.10 [91c51154] SentinelArrays v1.4.9 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [892a3eda] StringManipulation v0.4.2 [09ab397b] StructArrays v0.7.2 [ec057cc2] StructUtils v2.6.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [6aa5eb33] TaylorSeries v0.20.10 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [013be700] UnsafeAtomics v0.3.0 [d1e2174e] CUDA_Compiler_jll v0.4.1+0 [4ee394cb] CUDA_Driver_jll v13.1.0+0 [76a88914] CUDA_Runtime_jll v0.19.2+0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [6727f6b2] GibbsSeaWater_jll v3.5.2+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.52.0+0 [e33a78d0] Hwloc_jll v2.12.2+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.38+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.2.2+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [9bd350c2] OpenSSH_jll v10.2.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [1e29f10c] demumble_jll v1.3.0+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for Oceananigans [9e8cae18-63c1-5223-a75c-80ca9d6e9a09] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for KernelAbstractions [63c18a36-062a-441e-b654-da1e3ab1ce7c] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 WARNING: Detected access to binding `Oceananigans.Architectures` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. ERROR: LoadError: ArgumentError: Function definition contains invalid or missing arguments Expr head: Symbol = args: Array{Any}((2,)) 1: Symbol #13729#val 2: Expr head: Symbol = args: Array{Any}((2,)) 1: Expr head: Symbol call args: Array{Any}((1,)) 1: Symbol gridDim 2: Expr head: Symbol block args: Array{Any}((3,)) 1: Expr head: Symbol meta args: Array{Any}((1,)) 1: Symbol inline 2: LineNumberNode line: Int64 71 file: Symbol /home/pkgeval/.julia/packages/CUDA/FJf6p/src/device/intrinsics/indexing.jl 3: Expr head: Symbol tuple args: Array{Any}((3,)) 1: Expr 2: Expr 3: Expr Stacktrace: [1] invalid_def @ ~/.julia/packages/ExprTools/MDS6z/src/function.jl:30 [inlined] [2] splitdef(ex::Expr; throw::Bool) @ ExprTools ~/.julia/packages/ExprTools/MDS6z/src/function.jl:121 [3] splitdef(ex::Expr) @ ExprTools ~/.julia/packages/ExprTools/MDS6z/src/function.jl:23 [4] var"@device_function"(__source__::LineNumberNode, __module__::Module, ex::Any) @ CUDA ~/.julia/packages/CUDA/FJf6p/src/device/utils.jl:29 [5] fl_lower(ex::Expr, mod::Module, filename::String, lineno::UInt64, world::UInt64, warn::Bool) @ Base ./flfrontend.jl:24 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [7] top-level scope @ ~/.julia/packages/CUDA/FJf6p/src/device/intrinsics.jl:8 [8] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [9] top-level scope @ ~/.julia/packages/CUDA/FJf6p/src/CUDA.jl:78 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2811 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2570 [13] macro expansion @ ./loading.jl:2498 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2462 [16] require @ ./loading.jl:2438 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/OceanBioME/CUa2o/src/Particles/atomic_operations.jl:3 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [22] top-level scope @ ~/.julia/packages/OceanBioME/CUa2o/src/Particles/Particles.jl:54 [23] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [24] top-level scope @ ~/.julia/packages/OceanBioME/CUa2o/src/OceanBioME.jl:215 [25] include(mod::Module, _path::String) @ Base ./Base.jl:309 [26] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2811 [27] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2570 [28] macro expansion @ ./loading.jl:2498 [inlined] [29] macro expansion @ ./lock.jl:376 [inlined] [30] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2462 [31] require @ ./loading.jl:2438 [inlined] [32] eval_import_path @ ./module.jl:36 [inlined] [33] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [34] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [35] top-level scope @ ~/.julia/packages/OceanBioME/CUa2o/test/dependencies_for_runtests.jl:1 [36] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [37] top-level scope @ ~/.julia/packages/OceanBioME/CUa2o/test/runtests.jl:1 [38] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [39] top-level scope @ none:6 [40] eval(m::Module, e::Any) @ Core ./boot.jl:489 [41] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [42] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/CUDA/FJf6p/src/device/utils.jl:56 in expression starting at /home/pkgeval/.julia/packages/CUDA/FJf6p/src/device/intrinsics/indexing.jl:64 in expression starting at /home/pkgeval/.julia/packages/CUDA/FJf6p/src/device/intrinsics.jl:8 in expression starting at /home/pkgeval/.julia/packages/CUDA/FJf6p/src/CUDA.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/CUa2o/src/Particles/atomic_operations.jl:3 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/CUa2o/src/Particles/Particles.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/CUa2o/src/OceanBioME.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/CUa2o/test/dependencies_for_runtests.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/CUa2o/test/runtests.jl:1 Testing failed after 1196.69s ERROR: LoadError: Package OceanBioME errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:3010 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2859 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 2177.35s: package tests unexpectedly errored