Package evaluation to test Margins on Julia 1.13.0-alpha2.30 (5abf758bb1*) started at 2026-01-09T13:32:12.938


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.42s


################################################################################
# Installation
#

Installing Margins...
   Resolving package versions...
   Installed Indexing ──────────────────── v1.1.1
   Installed CommonWorldInvalidations ──── v1.0.0
   Installed DiffResults ───────────────── v1.1.0
   Installed MacroTools ────────────────── v0.5.16
   Installed CodecLz4 ──────────────────── v0.4.6
   Installed ForwardDiff ───────────────── v1.3.1
   Installed DataStructures ────────────── v0.19.3
   Installed CodecZstd ─────────────────── v0.8.7
   Installed Lz4_jll ───────────────────── v1.10.1+0
   Installed Rmath_jll ─────────────────── v0.5.1+0
   Installed InlineStrings ─────────────── v1.4.5
   Installed ArrowTypes ────────────────── v2.3.0
   Installed MixedModels ───────────────── v4.38.1
   Installed FillArrays ────────────────── v1.15.0
   Installed GLM ───────────────────────── v1.9.2
   Installed StringViews ───────────────── v1.3.6
   Installed Adapt ─────────────────────── v4.4.0
   Installed HypergeometricFunctions ───── v0.3.28
   Installed AliasTables ───────────────── v1.1.3
   Installed SplitApplyCombine ─────────── v1.2.3
   Installed ConcurrentUtilities ───────── v2.5.0
   Installed StatsBase ─────────────────── v0.34.9
   Installed StatsModels ───────────────── v0.7.7
   Installed ExprTools ─────────────────── v0.1.10
   Installed OrderedCollections ────────── v1.8.1
   Installed Compat ────────────────────── v4.18.1
   Installed TranscodingStreams ────────── v0.11.3
   Installed ShiftedArrays ─────────────── v2.0.0
   Installed MixedModelsDatasets ───────── v0.1.2
   Installed Combinatorics ─────────────── v1.1.0
   Installed TimeZones ─────────────────── v1.22.2
   Installed IteratorInterfaceExtensions ─ v1.0.0
   Installed DataAPI ───────────────────── v1.16.0
   Installed InvertedIndices ───────────── v1.3.1
   Installed StatsAPI ──────────────────── v1.8.0
   Installed Statistics ────────────────── v1.11.1
   Installed CEnum ─────────────────────── v0.5.0
   Installed CommonSubexpressions ──────── v0.3.1
   Installed PrecompileTools ───────────── v1.3.3
   Installed ProgressMeter ─────────────── v1.11.0
   Installed DataValueInterfaces ───────── v1.0.0
   Installed SentinelArrays ────────────── v1.4.9
   Installed StaticArraysCore ──────────── v1.4.4
   Installed IrrationalConstants ───────── v0.2.6
   Installed FastGaussQuadrature ───────── v1.1.0
   Installed StaticArrays ──────────────── v1.9.16
   Installed QuadGK ────────────────────── v2.11.2
   Installed StringManipulation ────────── v0.4.2
   Installed SciMLPublic ───────────────── v1.0.1
   Installed NaNMath ───────────────────── v1.1.3
   Installed Requires ──────────────────── v1.3.1
   Installed OpenSpecFun_jll ───────────── v0.5.6+0
   Installed JSON3 ─────────────────────── v1.14.3
   Installed ArrayLayouts ──────────────── v1.12.2
   Installed DiffRules ─────────────────── v1.15.1
   Installed Parsers ───────────────────── v2.8.3
   Installed LogExpFunctions ───────────── v0.3.29
   Installed GroupedArrays ─────────────── v0.3.4
   Installed StandardizedPredictors ────── v1.0.1
   Installed BitIntegers ───────────────── v0.3.7
   Installed PrettyTables ──────────────── v3.1.2
   Installed Distributions ─────────────── v0.25.123
   Installed Rmath ─────────────────────── v0.9.0
   Installed IfElse ────────────────────── v0.1.1
   Installed StatsFuns ─────────────────── v1.5.2
   Installed Tables ────────────────────── v1.12.1
   Installed PtrArrays ─────────────────── v1.3.0
   Installed EnumX ─────────────────────── v1.0.5
   Installed TypedTables ───────────────── v1.4.6
   Installed Scratch ───────────────────── v1.3.0
   Installed Reexport ──────────────────── v1.2.2
   Installed SpecialFunctions ──────────── v2.6.1
   Installed BandedMatrices ────────────── v1.11.0
   Installed DataFrames ────────────────── v1.8.1
   Installed Static ────────────────────── v1.3.1
   Installed PooledArrays ──────────────── v1.4.3
   Installed Missings ──────────────────── v1.2.0
   Installed JLLWrappers ───────────────── v1.7.1
   Installed Preferences ───────────────── v1.5.1
   Installed LaTeXStrings ──────────────── v1.4.0
   Installed TableTraits ───────────────── v1.0.1
   Installed PDMats ────────────────────── v0.11.37
   Installed CovarianceMatrices ────────── v0.22.0
   Installed SortingAlgorithms ─────────── v1.2.2
   Installed TZJData ───────────────────── v1.5.0+2025b
   Installed StructTypes ───────────────── v1.11.0
   Installed Crayons ───────────────────── v4.1.1
   Installed FormulaCompiler ───────────── v1.1.3
   Installed NLopt ─────────────────────── v1.2.1
   Installed Dictionaries ──────────────── v0.4.6
   Installed DocStringExtensions ───────── v0.9.5
   Installed CategoricalArrays ─────────── v0.10.8
   Installed NLopt_jll ─────────────────── v2.10.0+0
   Installed Mocking ───────────────────── v0.8.1
   Installed Arrow ─────────────────────── v2.8.0
   Installed BSplineKit ────────────────── v0.19.1
   Installed Margins ───────────────────── v2.0.3
  Installing 5 artifacts
   Installed artifact Rmath       121.9 KiB
   Installed artifact OpenSpecFun 194.9 KiB
   Installed artifact Lz4         239.7 KiB
   Installed artifact NLopt       322.7 KiB
   Installed artifact tzjdata     112.5 KiB
    Updating `~/.julia/environments/v1.13/Project.toml`
  [883ce5cb] + Margins v2.0.3
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [79e6a3ab] + Adapt v4.4.0
  [66dad0bd] + AliasTables v1.1.3
  [4c555306] + ArrayLayouts v1.12.2
  [69666777] + Arrow v2.8.0
  [31f734f8] + ArrowTypes v2.3.0
  [093aae92] + BSplineKit v0.19.1
  [aae01518] + BandedMatrices v1.11.0
  [c3b6d118] + BitIntegers v0.3.7
  [fa961155] + CEnum v0.5.0
⌅ [324d7699] + CategoricalArrays v0.10.8
  [5ba52731] + CodecLz4 v0.4.6
  [6b39b394] + CodecZstd v0.8.7
  [861a8166] + Combinatorics v1.1.0
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.18.1
  [f0e56b4a] + ConcurrentUtilities v2.5.0
⌅ [60f91f6f] + CovarianceMatrices v0.22.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.1
  [864edb3b] + DataStructures v0.19.3
  [e2d170a0] + DataValueInterfaces v1.0.0
  [85a47980] + Dictionaries v0.4.6
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [31c24e10] + Distributions v0.25.123
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.5
  [e2ba6199] + ExprTools v0.1.10
  [442a2c76] + FastGaussQuadrature v1.1.0
  [1a297f60] + FillArrays v1.15.0
  [72341345] + FormulaCompiler v1.1.3
  [f6369f11] + ForwardDiff v1.3.1
  [38e38edf] + GLM v1.9.2
  [6407cd72] + GroupedArrays v0.3.4
  [34004b35] + HypergeometricFunctions v0.3.28
  [615f187c] + IfElse v0.1.1
  [313cdc1a] + Indexing v1.1.1
  [842dd82b] + InlineStrings v1.4.5
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [0f8b85d8] + JSON3 v1.14.3
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [883ce5cb] + Margins v2.0.3
  [e1d29d7a] + Missings v1.2.0
⌅ [ff71e718] + MixedModels v4.38.1
  [7e9fb7ac] + MixedModelsDatasets v0.1.2
  [78c3b35d] + Mocking v0.8.1
  [76087f3c] + NLopt v1.2.1
  [77ba4419] + NaNMath v1.1.3
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.37
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.1
  [08abe8d2] + PrettyTables v3.1.2
  [92933f4c] + ProgressMeter v1.11.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [431bcebd] + SciMLPublic v1.0.1
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.9
  [1277b4bf] + ShiftedArrays v2.0.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [03a91e81] + SplitApplyCombine v1.2.3
  [5064a6a7] + StandardizedPredictors v1.0.1
  [aedffcd0] + Static v1.3.1
  [90137ffa] + StaticArrays v1.9.16
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.9
  [4c63d2b9] + StatsFuns v1.5.2
  [3eaba693] + StatsModels v0.7.7
  [892a3eda] + StringManipulation v0.4.2
  [354b36f9] + StringViews v1.3.6
  [856f2bd8] + StructTypes v1.11.0
  [dc5dba14] + TZJData v1.5.0+2025b
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [f269a46b] + TimeZones v1.22.2
  [3bb67fe8] + TranscodingStreams v0.11.3
  [9d95f2ec] + TypedTables v1.4.6
  [5ced341a] + Lz4_jll v1.10.1+0
  [079eb43e] + NLopt_jll v2.10.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.12.2
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 10.37s


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# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5443.4 ms  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 27 already precompiled.

Precompiling package dependencies...

Precompilation completed after 835.1s


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# Testing
#

     Testing Margins
      Status `/tmp/jl_fZdz7B/Project.toml`
  [6e4b80f9] BenchmarkTools v1.6.3
  [336ed68f] CSV v0.10.15
⌅ [324d7699] CategoricalArrays v0.10.8
⌅ [60f91f6f] CovarianceMatrices v0.22.0
  [a93c6f00] DataFrames v1.8.1
  [31c24e10] Distributions v0.25.123
  [72341345] FormulaCompiler v1.1.3
  [38e38edf] GLM v1.9.2
  [883ce5cb] Margins v2.0.3
⌅ [ff71e718] MixedModels v4.38.1
  [ce6b1742] RDatasets v0.8.1
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.9
  [3eaba693] StatsModels v0.7.7
  [bd369af6] Tables v1.12.1
  [ade2ca70] Dates v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_fZdz7B/Manifest.toml`
  [79e6a3ab] Adapt v4.4.0
  [66dad0bd] AliasTables v1.1.3
  [4c555306] ArrayLayouts v1.12.2
  [69666777] Arrow v2.8.0
  [31f734f8] ArrowTypes v2.3.0
  [093aae92] BSplineKit v0.19.1
  [aae01518] BandedMatrices v1.11.0
  [6e4b80f9] BenchmarkTools v1.6.3
  [c3b6d118] BitIntegers v0.3.7
  [fa961155] CEnum v0.5.0
  [336ed68f] CSV v0.10.15
⌅ [324d7699] CategoricalArrays v0.10.8
  [5ba52731] CodecLz4 v0.4.6
  [944b1d66] CodecZlib v0.7.8
  [6b39b394] CodecZstd v0.8.7
  [861a8166] Combinatorics v1.1.0
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.18.1
  [f0e56b4a] ConcurrentUtilities v2.5.0
⌅ [60f91f6f] CovarianceMatrices v0.22.0
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.1
  [864edb3b] DataStructures v0.19.3
  [e2d170a0] DataValueInterfaces v1.0.0
  [85a47980] Dictionaries v0.4.6
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [31c24e10] Distributions v0.25.123
  [ffbed154] DocStringExtensions v0.9.5
  [4e289a0a] EnumX v1.0.5
  [e2ba6199] ExprTools v0.1.10
  [442a2c76] FastGaussQuadrature v1.1.0
  [5789e2e9] FileIO v1.17.1
  [48062228] FilePathsBase v0.9.24
  [1a297f60] FillArrays v1.15.0
  [72341345] FormulaCompiler v1.1.3
  [f6369f11] ForwardDiff v1.3.1
  [38e38edf] GLM v1.9.2
  [6407cd72] GroupedArrays v0.3.4
  [34004b35] HypergeometricFunctions v0.3.28
  [615f187c] IfElse v0.1.1
  [313cdc1a] Indexing v1.1.1
  [842dd82b] InlineStrings v1.4.5
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
⌃ [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.3
  [b964fa9f] LaTeXStrings v1.4.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [883ce5cb] Margins v2.0.3
  [e1d29d7a] Missings v1.2.0
⌅ [ff71e718] MixedModels v4.38.1
  [7e9fb7ac] MixedModelsDatasets v0.1.2
  [78c3b35d] Mocking v0.8.1
  [76087f3c] NLopt v1.2.1
  [77ba4419] NaNMath v1.1.3
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.37
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.1
  [08abe8d2] PrettyTables v3.1.2
  [92933f4c] ProgressMeter v1.11.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [df47a6cb] RData v1.1.0
  [ce6b1742] RDatasets v0.8.1
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [431bcebd] SciMLPublic v1.0.1
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.9
  [1277b4bf] ShiftedArrays v2.0.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [03a91e81] SplitApplyCombine v1.2.3
  [5064a6a7] StandardizedPredictors v1.0.1
  [aedffcd0] Static v1.3.1
  [90137ffa] StaticArrays v1.9.16
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.9
  [4c63d2b9] StatsFuns v1.5.2
  [3eaba693] StatsModels v0.7.7
  [892a3eda] StringManipulation v0.4.2
  [354b36f9] StringViews v1.3.6
  [856f2bd8] StructTypes v1.11.0
  [dc5dba14] TZJData v1.5.0+2025b
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [f269a46b] TimeZones v1.22.2
  [3bb67fe8] TranscodingStreams v0.11.3
  [9d95f2ec] TypedTables v1.4.6
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
  [5ced341a] Lz4_jll v1.10.1+0
  [079eb43e] NLopt_jll v2.10.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.7.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
[ Info: Skipping contrasts for variable z: specified as mixture in reference grid (use discrete levels if contrasts desired)

Minimizing 2    Time: 0:00:00 ( 0.31  s/it)
   objective: 1798.0391401915217



Minimizing 14    Time: 0:00:00 (56.85 ms/it)
┌ Warning: `wts` keyword argument is deprecated, use `weights` instead
│   caller = glm(::Matrix{Float64}, ::Vector{Float64}, ::Binomial{Float64}, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Any, Nothing, @NamedTuple{wts::Vector{Float64}, dofit::Bool, offset::Vector{Float64}}}) at glmfit.jl:618
└ @ Core ~/.julia/packages/GLM/IngN2/src/glmfit.jl:618

Minimizing 2    Time: 0:00:00 ( 0.35  s/it)
   objective: 126.3474937319155



Minimizing 73    Time: 0:00:00 ( 9.75 ms/it)
┌ Warning: `wts` keyword argument is deprecated, use `weights` instead
│   caller = glm(::Matrix{Float64}, ::Vector{Float64}, ::Bernoulli{Float64}, ::Vararg{Any}; kwargs::Base.Pairs{Symbol, Any, Nothing, @NamedTuple{wts::Vector{Float64}, dofit::Bool, offset::Vector{Float64}}}) at glmfit.jl:618
└ @ Core ~/.julia/packages/GLM/IngN2/src/glmfit.jl:618

Minimizing 2    Time: 0:00:00 ( 0.15  s/it)
   objective: 524.2283322643004



Minimizing 87    Time: 0:00:00 ( 3.85 ms/it)
Test Summary:      | Pass  Total      Time
Core Functionality |  316    316  10m00.8s
[ Info: Skipping contrasts for variable education: specified as mixture in reference grid (use discrete levels if contrasts desired)
┌ Warning: Empty dataset provided to hierarchical_grid(). Representative values may be undefined (NaN/missing).
└ @ Margins ~/.julia/packages/Margins/Q2cRr/src/profile/reference_grids.jl:904
┌ Warning: Categorical combination Dict(:education => "Graduate", :country => "USA", :region => "South", :city => "CityB") matches no observations in data
└ @ Margins ~/.julia/packages/Margins/Q2cRr/src/profile/reference_grids.jl:1048
┌ Warning: Categorical combination Dict(:education => "HS", :country => "USA", :region => "South", :city => "CityA") matches no observations in data
└ @ Margins ~/.julia/packages/Margins/Q2cRr/src/profile/reference_grids.jl:1048
┌ Warning: Categorical combination Dict(:education => "HS", :country => "USA", :region => "East", :city => "CityB") matches no observations in data
└ @ Margins ~/.julia/packages/Margins/Q2cRr/src/profile/reference_grids.jl:1048
┌ Warning: 16 out of 24 categorical combinations (66.7%) match no data. Consider reviewing specification.
└ @ Margins ~/.julia/packages/Margins/Q2cRr/src/profile/reference_grids.jl:1057
[ Info: Medium grid estimated: 15000 combinations.
[ Info: Skipping contrasts for variable bool_implicit: specified as mixture in reference grid (use discrete levels if contrasts desired)

Bool variable filled by grid completion: Test Failed at /home/pkgeval/.julia/packages/Margins/Q2cRr/test/regression/test_bool_mixture_skip.jl:40
  Expression: all(result_df.contrast .== "derivative")
   Evaluated: all(Bool[0, 0])
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/Margins/Q2cRr/test/regression/test_bool_mixture_skip.jl:11
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/Margins/Q2cRr/test/regression/test_bool_mixture_skip.jl:15 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined]
   [5] macro expansion
     @ ~/.julia/packages/Margins/Q2cRr/test/regression/test_bool_mixture_skip.jl:40 [inlined]
   [6] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:753 [inlined]
[ Info: Skipping contrasts for variable other_bool: specified as mixture in reference grid (use discrete levels if contrasts desired)
[ Info: Skipping contrasts for variable bool_var: specified as mixture in reference grid (use discrete levels if contrasts desired)
✓ All second differences tests passed

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile.
--trace-compile is enabled during profile collection.
======================================================================================

cmd: /opt/julia/bin/julia 538 running 1 of 1

signal (10): User defined signal 1
egal_types at /source/src/builtins.c:174
egal_types at /source/src/builtins.c:185
ijl_types_equal at /source/src/subtype.c:2326
jl_specializations_get_linfo_ at /source/src/gf.c:236
cache_method at /source/src/gf.c:1667
ml_matches at /source/src/gf.c:5155
ml_matches at /source/src/gf.c:4847 [inlined]
ijl_matching_methods at /source/src/gf.c:3234 [inlined]
ijl_matching_methods at /source/src/gf.c:3221
_methods_by_ftype at ./runtime_internals.jl:1600 [inlined]
_findall at ./../usr/share/julia/Compiler/src/methodtable.jl:97 [inlined]
#findall#5 at ./../usr/share/julia/Compiler/src/methodtable.jl:70 [inlined]
findall at ./../usr/share/julia/Compiler/src/methodtable.jl:70 [inlined]
#findall#7 at ./../usr/share/julia/Compiler/src/methodtable.jl:105
findall at ./../usr/share/julia/Compiler/src/methodtable.jl:102 [inlined]
find_simple_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:386
jfptr_find_simple_method_matches_3819.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_invoke at /source/src/gf.c:4123
tojlinvoke89303.1 at /opt/julia/lib/julia/sys.so (unknown line)
j_find_simple_method_matches_82906.1 at /opt/julia/lib/julia/sys.so (unknown line)
#find_method_matches#131 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:348 [inlined]
find_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:342 [inlined]
abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:120
abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2796
abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2902
abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2895 [inlined]
abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3055
abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3073 [inlined]
abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3429
abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3823 [inlined]
abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3780 [inlined]
typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4329
jfptr_typeinf_local_86972.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4486
typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1386
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1575 [inlined]
typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1584
jfptr_typeinf_ext_toplevel_87172.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
jl_type_infer at /source/src/gf.c:463
jl_compile_method_internal at /source/src/gf.c:3636
_jl_invoke at /source/src/gf.c:4108 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
#second_differences_at#185 at /home/pkgeval/.julia/packages/Margins/Q2cRr/src/second_differences/at_point.jl:423
second_differences_at at /home/pkgeval/.julia/packages/Margins/Q2cRr/src/second_differences/at_point.jl:396
unknown function (ip: 0x7eb61986cf66) at (unknown file)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
do_call at /source/src/interpreter.c:123
eval_value at /source/src/interpreter.c:243
eval_stmt_value at /source/src/interpreter.c:194 [inlined]
eval_body at /source/src/interpreter.c:679
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:550
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:550
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
jl_interpret_toplevel_thunk at /source/src/interpreter.c:884
jl_toplevel_eval_flex at /source/src/toplevel.c:742
jl_eval_toplevel_stmts at /source/src/toplevel.c:585
jl_toplevel_eval_flex at /source/src/toplevel.c:683
ijl_toplevel_eval at /source/src/toplevel.c:754
ijl_toplevel_eval_in at /source/src/toplevel.c:799
eval at ./boot.jl:489
include_string at ./loading.jl:2988
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
_include at ./loading.jl:3048
include at ./Base.jl:310
IncludeInto at ./Base.jl:311
unknown function (ip: 0x7eb612567422) at (unknown file)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
do_call at /source/src/interpreter.c:123
eval_value at /source/src/interpreter.c:243
eval_stmt_value at /source/src/interpreter.c:194 [inlined]
eval_body at /source/src/interpreter.c:679
eval_body at /source/src/interpreter.c:550
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
eval_body at /source/src/interpreter.c:558
jl_interpret_toplevel_thunk at /source/src/interpreter.c:884
jl_toplevel_eval_flex at /source/src/toplevel.c:742
jl_eval_toplevel_stmts at /source/src/toplevel.c:585
jl_toplevel_eval_flex at /source/src/toplevel.c:683
ijl_toplevel_eval at /source/src/toplevel.c:754
ijl_toplevel_eval_in at /source/src/toplevel.c:799
eval at ./boot.jl:489
include_string at ./loading.jl:2988
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
_include at ./loading.jl:3048
include at ./Base.jl:310
IncludeInto at ./Base.jl:311
jfptr_IncludeInto_48555.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
do_call at /source/src/interpreter.c:123
eval_value at /source/src/interpreter.c:243
eval_stmt_value at /source/src/interpreter.c:194 [inlined]
eval_body at /source/src/interpreter.c:679
jl_interpret_toplevel_thunk at /source/src/interpreter.c:884
jl_toplevel_eval_flex at /source/src/toplevel.c:742
jl_eval_toplevel_stmts at /source/src/toplevel.c:585
jl_toplevel_eval_flex at /source/src/toplevel.c:683
ijl_toplevel_eval at /source/src/toplevel.c:754
ijl_toplevel_eval_in at /source/src/toplevel.c:799
eval at ./boot.jl:489
exec_options at ./client.jl:310
_start at ./client.jl:577
jfptr__start_77926.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
true_main at /source/src/jlapi.c:971
jl_repl_entrypoint at /source/src/jlapi.c:1138
main at /source/cli/loader_exe.c:58
unknown function (ip: 0x7eb62f5b1249) at /lib/x86_64-linux-gnu/libc.so.6
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S
unknown function (ip: (nil)) at (unknown file)


==============================================================
Profile collected. A report will print at the next yield point.
Disabling --trace-compile
==============================================================


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile.
--trace-compile is enabled during profile collection.
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /source/src/scheduler.c:457
wait at ./task.jl:1246
wait_forever at ./task.jl:1168
jfptr_wait_forever_34528.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:4116 [inlined]
ijl_apply_generic at /source/src/gf.c:4313
jl_apply at /source/src/julia.h:2275 [inlined]
start_task at /source/src/task.c:1281
unknown function (ip: (nil)) at (unknown file)


==============================================================
Profile collected. A report will print at the next yield point.
Disabling --trace-compile
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x000073a7cfaf5d20 Total snapshots: 408. Utilization: 0%
   ╎408 @Base/task.jl:1168  wait_forever()
407╎ 408 @Base/task.jl:1246  wait()


[538] signal 15: Terminated
in expression starting at /home/pkgeval/.julia/packages/Margins/Q2cRr/test/test_second_differences_at.jl:12
unknown function (ip: 0x7eb62f621582) at /lib/x86_64-linux-gnu/libc.so.6
malloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
posix_memalign at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
aligned_alloc at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:78 [inlined]
operator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opa.cc:149
operator new at /workspace/srcdir/gcc-14.2.0/libstdc++-v3/libsupc++/new_opant.cc:36
_ZN4llvm15allocate_bufferEmm at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line)

PkgEval terminated after 2722.07s: test duration exceeded the time limit