Package evaluation to test AlgebraicRewriting on Julia 1.12.4 (01a2eadb04*) started at 2026-01-09T05:15:22.472 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.73s ################################################################################ # Installation # Installing AlgebraicRewriting... Resolving package versions... Installed XML2_jll ──────────────────── v2.15.1+0 Installed Crayons ───────────────────── v4.1.1 Installed JSON ──────────────────────── v0.21.4 Installed ColorTypes ────────────────── v0.12.1 Installed Preferences ───────────────── v1.5.1 Installed JSON3 ─────────────────────── v1.14.3 Installed PrettyTables ──────────────── v2.4.0 Installed GATlab ────────────────────── v0.2.2 Installed TableTraits ───────────────── v1.0.1 Installed IterTools ─────────────────── v1.10.0 Installed DataAPI ───────────────────── v1.16.0 Installed FixedPointNumbers ─────────── v0.8.5 Installed Parsers ───────────────────── v2.8.3 Installed Tables ────────────────────── v1.12.1 Installed Measures ──────────────────── v0.3.3 Installed JLLWrappers ───────────────── v1.7.1 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Permutations ──────────────── v0.4.23 Installed StaticArrays ──────────────── v1.9.16 Installed PrecompileTools ───────────── v1.3.3 Installed StaticArraysCore ──────────── v1.4.4 Installed DataValueInterfaces ───────── v1.0.0 Installed LaTeXStrings ──────────────── v1.4.0 Installed GeneralizedGenerated ──────── v0.3.3 Installed OrderedCollections ────────── v1.8.1 Installed AlgebraicRewriting ────────── v0.5.0 Installed NameResolution ────────────── v0.1.5 Installed AlgebraicInterfaces ───────── v0.1.4 Installed Reexport ──────────────────── v1.2.2 Installed CompTime ──────────────────── v0.1.2 Installed Combinatorics ─────────────── v1.1.0 Installed Statistics ────────────────── v1.11.1 Installed DataStructures ────────────── v0.18.22 ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:811 Installed StructEquality ────────────── v2.1.0 Installed Requires ──────────────────── v1.3.1 Installed Colors ────────────────────── v0.13.1 Installed MacroTools ────────────────── v0.5.16 Installed MLStyle ───────────────────── v0.4.17 Installed Compat ────────────────────── v4.18.1 Installed LightXML ──────────────────── v0.9.3 Installed PEG ───────────────────────── v1.0.4 Installed PrettyPrint ───────────────── v0.2.0 Installed Compose ───────────────────── v0.9.6 Installed StringManipulation ────────── v0.4.2 Installed JuliaVariables ────────────── v0.2.4 Installed StructTypes ───────────────── v1.11.0 Installed Catlab ────────────────────── v0.17.4 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ────────────────────── v0.2.26 Installing 2 artifacts Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Updating `~/.julia/environments/v1.12/Project.toml` [725a01d3] + AlgebraicRewriting v0.5.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [227ef7b5] + ACSets v0.2.26 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [725a01d3] + AlgebraicRewriting v0.5.0 [134e5e36] + Catlab v0.17.4 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.1.0 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.18.1 [a81c6b42] + Compose v0.9.6 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [53c48c17] + FixedPointNumbers v0.8.5 [f0ffcf3b] + GATlab v0.2.2 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [9c8b4983] + LightXML v0.9.3 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.3 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.2 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.15.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.54s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5497.4 ms ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 26 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/iseFl/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/iseFl/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/iseFl/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:306 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:317 │ [9] _start() │ @ Base ./client.jl:550 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 2505.6 ms ✓ Combinatorics 839.9 ms ✓ AlgebraicInterfaces 4632.7 ms ✓ OrderedCollections 852.6 ms ✓ DataValueInterfaces 929.3 ms ✓ LaTeXStrings 976.2 ms ✓ Measures 31938.4 ms ✓ MLStyle 866.7 ms ✓ Reexport 1253.0 ms ✓ Statistics 1060.9 ms ✓ PrettyPrint 855.7 ms ✓ IteratorInterfaceExtensions 958.6 ms ✓ DataAPI 5189.0 ms ✓ Crayons 1256.1 ms ✓ IterTools 7697.2 ms ✓ MacroTools 950.2 ms ✓ PEG 1072.2 ms ✓ StaticArraysCore 1257.2 ms ✓ Requires 4710.8 ms ✓ StructTypes 4363.0 ms ✓ Compat 1211.7 ms ✓ Preferences 1201.4 ms ✓ Permutations 6804.7 ms ✓ FixedPointNumbers 1390.6 ms ✓ Statistics → SparseArraysExt 958.2 ms ✓ NameResolution 821.8 ms ✓ TableTraits 10495.9 ms ✓ CompTime 1057.6 ms ✓ Compat → CompatLinearAlgebraExt 1018.4 ms ✓ PrecompileTools 1329.2 ms ✓ JLLWrappers 5686.8 ms ✓ ColorTypes 11663.3 ms ✓ JuliaVariables 5087.6 ms ✓ Tables 4129.2 ms ✓ DataStructures 1033.3 ms ✓ StructEquality 19430.6 ms ✓ StaticArrays 3737.8 ms ✓ StringManipulation 17250.1 ms ✓ Parsers 1169.0 ms ✓ Libiconv_jll 1028.5 ms ✓ ColorTypes → StyledStringsExt 7249.8 ms ✓ Colors 16020.8 ms ✓ GeneralizedGenerated 1523.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 33303.3 ms ✓ PrettyTables 19592.5 ms ✓ JSON3 4283.6 ms ✓ JSON 1563.1 ms ✓ XML2_jll 43542.0 ms ✓ ACSets 9854.1 ms ✓ Compose 87253.9 ms ✓ GATlab 1188.6 ms ✓ LightXML ✗ Catlab ✗ AlgebraicRewriting 51 dependencies successfully precompiled in 727 seconds. 32 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: AlgebraicRewriting Failed to precompile AlgebraicRewriting [725a01d3-f174-5bbd-84e1-b9417bad95d9] to "/home/pkgeval/.julia/compiled/v1.12/AlgebraicRewriting/jl_Sc8xQs". julia: /source/src/module.c:107: update_implicit_resolution: Assertion `resolution.binding_or_const' failed. [282] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/frut0/src/Catlab.jl:25 unknown function (ip: 0x7d0c24fccebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7d0c24f68394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:107 [inlined] jl_resolve_implicit_import at /source/src/module.c:316 jl_resolve_implicit_import at /source/src/module.c:1706 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1707 ijl_module_using at /source/src/module.c:1392 jl_toplevel_eval_flex at /source/src/toplevel.c:844 jl_toplevel_eval_flex at /source/src/toplevel.c:975 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 include_package_for_output at ./loading.jl:3024 jfptr_include_package_for_output_56176.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 include_string at ./loading.jl:2880 [inlined] exec_options at ./client.jl:315 _start at ./client.jl:550 jfptr__start_45490.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7d0c24f69249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 92961348 (Pool: 92959782; Big: 1566); GC: 25 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.12/Catlab/jl_KelcmO". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:6 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:10 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [21] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:4 [22] include(mod::Module, _path::String) @ Base ./Base.jl:306 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [27] include_string @ ./loading.jl:2880 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [29] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 745.09s ################################################################################ # Testing # Testing AlgebraicRewriting Status `/tmp/jl_orhc7A/Project.toml` [725a01d3] AlgebraicRewriting v0.5.0 [134e5e36] Catlab v0.17.4 ⌅ [864edb3b] DataStructures v0.18.22 ⌅ [08abe8d2] PrettyTables v2.4.0 [295af30f] Revise v3.13.1 [6ec83bb0] StructEquality v2.1.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_orhc7A/Manifest.toml` [227ef7b5] ACSets v0.2.26 [23cfdc9f] AlgebraicInterfaces v0.1.4 [725a01d3] AlgebraicRewriting v0.5.0 [134e5e36] Catlab v0.17.4 [da1fd8a2] CodeTracking v3.0.0 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.1.0 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a81c6b42] Compose v0.9.6 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [53c48c17] FixedPointNumbers v0.8.5 [f0ffcf3b] GATlab v0.2.2 [6b9d7cbe] GeneralizedGenerated v0.3.3 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [aa1ae85d] JuliaInterpreter v0.10.9 [b14d175d] JuliaVariables v0.2.4 [b964fa9f] LaTeXStrings v1.4.0 [9c8b4983] LightXML v0.9.3 [6f1432cf] LoweredCodeUtils v3.5.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [442fdcdd] Measures v0.3.3 [71a1bf82] NameResolution v0.1.5 [bac558e1] OrderedCollections v1.8.1 [12d937ae] PEG v1.0.4 [69de0a69] Parsers v2.8.3 [2ae35dd2] Permutations v0.4.23 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [8162dcfd] PrettyPrint v0.2.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [295af30f] Revise v3.13.1 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.2 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [94ce4f54] Libiconv_jll v1.18.0+0 [02c8fc9c] XML2_jll v2.15.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... ✗ Catlab Info Given AlgebraicRewriting was explicitly requested, output will be shown live  julia: /source/src/module.c:107: update_implicit_resolution: Assertion `resolution.binding_or_const' failed.  [310] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/frut0/src/Catlab.jl:25 unknown function (ip: 0x72dd07019ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x72dd06fb5394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:107 [inlined] jl_resolve_implicit_import at /source/src/module.c:316 jl_resolve_implicit_import at /source/src/module.c:1706 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1707 ijl_module_using at /source/src/module.c:1392 jl_toplevel_eval_flex at /source/src/toplevel.c:844 jl_toplevel_eval_flex at /source/src/toplevel.c:975 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 include_package_for_output at ./loading.jl:3024 jfptr_include_package_for_output_56176.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 include_string at ./loading.jl:2880 [inlined] exec_options at ./client.jl:315 _start at ./client.jl:550 jfptr__start_45490.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x72dd06fb6249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 95939214 (Pool: 95937589; Big: 1625); GC: 26 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.12/Catlab/jl_pyJnj7". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3311  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2679  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114  [7] #invokelatest_gr#232  @ ./reflection.jl:1297 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1289 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3882  [10] maybe_cachefile_lock  @ ./loading.jl:3879 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2665  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [13] macro expansion  @ ./loading.jl:2421 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [16] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2362  [17] top-level scope  @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:6  [18] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [19] top-level scope  @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:10  [20] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [21] top-level scope  @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:4  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3024  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2870  [27] include_string  @ ./loading.jl:2880 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:315  [29] _start()  @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:1 in expression starting at stdin:5 ✗ AlgebraicRewriting 0 dependencies successfully precompiled in 323 seconds. 83 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: Catlab Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.12/Catlab/jl_sW67m1". julia: /source/src/module.c:107: update_implicit_resolution: Assertion `resolution.binding_or_const' failed. [302] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/frut0/src/Catlab.jl:25 unknown function (ip: 0x739ad417aebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x739ad4116394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:107 [inlined] jl_resolve_implicit_import at /source/src/module.c:316 jl_resolve_implicit_import at /source/src/module.c:1706 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1707 ijl_module_using at /source/src/module.c:1392 jl_toplevel_eval_flex at /source/src/toplevel.c:844 jl_toplevel_eval_flex at /source/src/toplevel.c:975 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 include_package_for_output at ./loading.jl:3024 jfptr_include_package_for_output_56231.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 include_string at ./loading.jl:2880 [inlined] exec_options at ./client.jl:315 _start at ./client.jl:550 jfptr__start_45490.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x739ad4117249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 97975480 (Pool: 97973821; Big: 1659); GC: 26 AlgebraicRewriting Failed to precompile AlgebraicRewriting [725a01d3-f174-5bbd-84e1-b9417bad95d9] to "/home/pkgeval/.julia/compiled/v1.12/AlgebraicRewriting/jl_YkiB7w". julia: /source/src/module.c:107: update_implicit_resolution: Assertion `resolution.binding_or_const' failed. [310] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/Catlab/frut0/src/Catlab.jl:25 unknown function (ip: 0x72dd07019ebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x72dd06fb5394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) update_implicit_resolution at /source/src/module.c:107 [inlined] jl_resolve_implicit_import at /source/src/module.c:316 jl_resolve_implicit_import at /source/src/module.c:1706 [inlined] jl_replace_binding_locked2 at /source/src/module.c:1707 ijl_module_using at /source/src/module.c:1392 jl_toplevel_eval_flex at /source/src/toplevel.c:844 jl_toplevel_eval_flex at /source/src/toplevel.c:975 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 include_package_for_output at ./loading.jl:3024 jfptr_include_package_for_output_56176.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 include_string at ./loading.jl:2880 [inlined] exec_options at ./client.jl:315 _start at ./client.jl:550 jfptr__start_45490.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x72dd06fb6249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 95939214 (Pool: 95937589; Big: 1625); GC: 26 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.12/Catlab/jl_pyJnj7". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3311 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2679 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1297 [inlined] [8] invokelatest_gr @ ./reflection.jl:1289 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3882 [10] maybe_cachefile_lock @ ./loading.jl:3879 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2665 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [13] macro expansion @ ./loading.jl:2421 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2362 [17] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:6 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:10 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [21] top-level scope @ ~/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:4 [22] include(mod::Module, _path::String) @ Base ./Base.jl:306 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [27] include_string @ ./loading.jl:2880 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [29] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/Theories.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/categorical_algebra/module.jl:1 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/src/AlgebraicRewriting.jl:1 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/AlgebraicRewriting/4tkrF/test/runtests.jl:4 Testing failed after 334.05s ERROR: LoadError: Package AlgebraicRewriting errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 1131.65s: package fails to precompile