Package evaluation to test ADCME on Julia 1.13.0-alpha2.30 (5abf758bb1*) started at 2026-01-09T08:53:11.359 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.01s ################################################################################ # Installation # Installing ADCME... Resolving package versions... Installed libaec_jll ──────────── v1.1.4+0 Installed oneTBB_jll ──────────── v2022.0.0+1 Installed MKL_jll ─────────────── v2025.2.0+0 Installed VersionParsing ──────── v1.3.0 Installed CodecZlib ───────────── v0.7.8 Installed MPICH_jll ───────────── v4.3.2+0 Installed MacroTools ──────────── v0.5.16 Installed TranscodingStreams ──── v0.11.3 Installed MicrosoftMPI_jll ────── v10.1.4+3 Installed Compat ──────────────── v4.18.1 Installed IntelOpenMP_jll ─────── v2025.2.0+0 Installed Xorg_libpciaccess_jll ─ v0.18.1+0 Installed Statistics ──────────── v1.11.1 Installed Conda ───────────────── v1.10.3 Installed ChainRulesCore ──────── v1.26.0 Installed PrecompileTools ─────── v1.3.3 Installed StructUtils ─────────── v2.6.1 Installed IrrationalConstants ─── v0.1.1 Installed OpenSpecFun_jll ─────── v0.5.6+0 Installed AbstractFFTs ────────── v1.5.0 Installed Requires ────────────── v1.3.1 Installed HDF5_jll ────────────── v1.14.6+0 Installed PyCall ──────────────── v1.96.4 Installed LogExpFunctions ─────── v0.3.29 Installed OpenMPI_jll ─────────── v5.0.9+0 Installed Hwloc_jll ───────────── v2.12.2+0 Installed CMake ───────────────── v1.2.0 Installed Parsers ─────────────── v2.8.3 Installed BufferedStreams ─────── v1.2.2 Installed URIParser ───────────── v0.4.1 Installed JSON ────────────────── v1.3.0 Installed XML2_jll ────────────── v2.13.9+0 Installed Reexport ────────────── v1.2.2 Installed SpecialFunctions ────── v1.8.8 Installed Preferences ─────────── v1.5.1 Installed MPIPreferences ──────── v0.1.11 Installed FFTW_jll ────────────── v3.3.11+0 Installed FFTW ────────────────── v1.10.0 Installed ADCME ───────────────── v0.7.3 Installed JLLWrappers ─────────── v1.7.1 Installed Libiconv_jll ────────── v1.18.0+0 Installed MPItrampoline_jll ───── v5.5.4+0 Installed BinDeps ─────────────── v1.0.2 Installed DocStringExtensions ─── v0.9.5 Installed MAT ─────────────────── v0.10.7 Installed HDF5 ────────────────── v0.17.2 Installing 9 artifacts Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.5 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [07b341a0] + ADCME v0.7.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [07b341a0] + ADCME v0.7.3 [621f4979] + AbstractFFTs v1.5.0 [9e28174c] + BinDeps v1.0.2 [e1450e63] + BufferedStreams v1.2.2 [631607c0] + CMake v1.2.0 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [8f4d0f93] + Conda v1.10.3 [ffbed154] + DocStringExtensions v0.9.5 [7a1cc6ca] + FFTW v1.10.0 [f67ccb44] + HDF5 v0.17.2 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [438e738f] + PyCall v1.96.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [276daf66] + SpecialFunctions v1.8.8 [10745b16] + Statistics v1.11.1 [ec057cc2] + StructUtils v2.6.1 [3bb67fe8] + TranscodingStreams v0.11.3 [30578b45] + URIParser v0.4.1 [81def892] + VersionParsing v1.3.0 [f5851436] + FFTW_jll v3.3.11+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building CMake ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/50a8b41d2c562fccd9ab841085fc7d1e2706da82/build.log` Building ADCME ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/4ecfc24dbdf551f92b5de7ea2d99da3f7fde73c9/build.log` Installation completed after 1492.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4223.5 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 313.71s ################################################################################ # Testing # Testing ADCME Status `/tmp/jl_Pt1R5v/Project.toml` [07b341a0] ADCME v0.7.3 [631607c0] CMake v1.2.0 [7a1cc6ca] FFTW v1.10.0 ⌅ [23992714] MAT v0.10.7 [76087f3c] NLopt v1.2.1 [429524aa] Optim v1.13.3 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 ⌅ [276daf66] SpecialFunctions v1.8.8 [10745b16] Statistics v1.11.1 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Pt1R5v/Manifest.toml` [07b341a0] ADCME v0.7.3 [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [9e28174c] BinDeps v1.0.2 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [631607c0] CMake v1.2.0 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.13 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [7a1cc6ca] FFTW v1.10.0 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.3.1 [f67ccb44] HDF5 v0.17.2 ⌅ [92d709cd] IrrationalConstants v0.1.1 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [b964fa9f] LaTeXStrings v1.4.0 ⌃ [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 ⌅ [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 ⌅ [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 ⌅ [276daf66] SpecialFunctions v1.8.8 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.9 [ec057cc2] StructUtils v2.6.1 [3bb67fe8] TranscodingStreams v0.11.3 [30578b45] URIParser v0.4.1 [81def892] VersionParsing v1.3.0 [f5851436] FFTW_jll v3.3.11+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [079eb43e] NLopt_jll v2.10.0+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for NLopt [76087f3c-5699-56af-9a33-bf431cd00edd] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for NLopt_jll [079eb43e-fd8e-5478-9966-2cf3e3edb778] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for JLLWrappers [692b3bcd-3c85-4b1f-b108-f13ce0eb3210] │ exception = Required dependency Base.PkgId(Base.UUID("21216c6a-2e73-6563-6e65-726566657250"), "Preferences") failed to load from a cache file. └ @ Base loading.jl:2789 WARNING: Imported binding NLopt_jll.libnlopt was undeclared at import time during import to NLopt. ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] │ exception = Required dependency Base.PkgId(Base.UUID("81def892-9a0e-5fdd-b105-ffc91e053289"), "VersionParsing") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for Conda [8f4d0f93-b110-5947-807f-2305c1781a2d] │ exception = Required dependency Base.PkgId(Base.UUID("ec057cc2-7a8d-4b58-b3b3-92acb9f63b42"), "StructUtils") failed to load from a cache file. └ @ Base loading.jl:2789 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for JSON [682c06a0-de6a-54ab-a142-c8b1cf79cde6] │ exception = Required dependency Base.PkgId(Base.UUID("ec057cc2-7a8d-4b58-b3b3-92acb9f63b42"), "StructUtils") failed to load from a cache file. └ @ Base loading.jl:2789 WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. WARNING: Method definition length(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:819 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:238. WARNING: Method definition lastindex(PyCall.PyObject) in module PyCall at deprecated.jl:214 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:454. WARNING: Imported binding FFTW.fft was undeclared at import time during import to ADCME. WARNING: Imported binding FFTW.ifft was undeclared at import time during import to ADCME. WARNING: Method definition *(PyCall.PyObject, PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyoperators.jl:11 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/ops.jl:104. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. OMP: Info #212: KMP_AFFINITY: decoding x2APIC ids. OMP: Info #210: KMP_AFFINITY: Affinity capable, using global cpuid leaf 11 info OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: 60 OMP: Info #156: KMP_AFFINITY: 1 available OS procs OMP: Info #157: KMP_AFFINITY: Uniform topology OMP: Info #159: KMP_AFFINITY: 1 packages x 1 cores/pkg x 1 threads/core (1 total cores) OMP: Info #214: KMP_AFFINITY: OS proc to physical thread map: OMP: Info #171: KMP_AFFINITY: OS proc 60 maps to package 1 OMP: Info #250: KMP_AFFINITY: pid 13154 tid 13154 thread 0 bound to OS proc set 60 ┌ Warning: Cannot load /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so. Please recompile the shared library by `ADCME.precompile()` for using custom operators. └ @ ADCME ~/.julia/packages/ADCME/94vEM/src/ADCME.jl:78 Requirement already satisfied: matplotlib in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (3.3.1) Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.3 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2.4.7) Requirement already satisfied: python-dateutil>=2.1 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2.8.1) Requirement already satisfied: kiwisolver>=1.0.1 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (1.2.0) Requirement already satisfied: cycler>=0.10 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (0.10.0) Requirement already satisfied: pillow>=6.2.0 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (7.2.0) Requirement already satisfied: numpy>=1.15 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (1.19.1) Requirement already satisfied: certifi>=2020.06.20 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2020.6.20) Requirement already satisfied: six>=1.5 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from python-dateutil>=2.1->matplotlib) (1.14.0) 2026-01-09 09:33:20.650864: I tensorflow/core/platform/cpu_feature_guard.cc:145] This TensorFlow binary is optimized with Intel(R) MKL-DNN to use the following CPU instructions in performance critical operations: SSE4.1 SSE4.2 AVX AVX2 FMA To enable them in non-MKL-DNN operations, rebuild TensorFlow with the appropriate compiler flags. 2026-01-09 09:33:20.661570: I tensorflow/core/platform/profile_utils/cpu_utils.cc:94] CPU Frequency: 2500000000 Hz 2026-01-09 09:33:20.661786: I tensorflow/compiler/xla/service/service.cc:168] XLA service 0xa4ac010 initialized for platform Host (this does not guarantee that XLA will be used). Devices: 2026-01-09 09:33:20.661802: I tensorflow/compiler/xla/service/service.cc:176] StreamExecutor device (0): Host, Default Version [✔️] Julia version [✔️] TensorFlow version [✔️] Python executable file [✔️] Julia path [✔️] Dynamic library path [✔️] Memory Address Length = 64 [✘] Binaries path [Reason] /home/pkgeval/.julia/adcme/bin is not in PATH. This path contains compatible tools such as a GCC compiler, `cmake`, `make`, or any other tools you want to use directly from terminal. However, setting the path is NOT a requirement, and ADCME works totally fine without any action. [Instruction] (Optional) Add your binary path to your environment path, e.g. (Unix systems) export PATH=/home/pkgeval/.julia/adcme/bin:$PATH For convenience, you can add the above line to your `~/.bashrc` (Linux) or `~/.bash_profile` (Apple). For Windows, you need to add it to system environment. [✘] GPU Support (Optional) [Reason] ADCME is not compiled against GPU. [Instruction] If you intend to use GPU, set ENV["GPU"] = 1 and then rebuild ADCME. ============================================================ /home/pkgeval/.julia/packages/ADCME/94vEM/deps/deps.jl ============================================================ BINDIR = "/home/pkgeval/.julia/adcme/bin" LIBDIR = "/home/pkgeval/.julia/adcme/lib" TF_INC = "/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/include" TF_ABI = "1" PREFIXDIR = "/home/pkgeval/.julia/adcme/lib/Libraries" CC = "/home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc" CXX = "/home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++" CMAKE = "/home/pkgeval/.julia/adcme/bin/cmake" MAKE = "/home/pkgeval/.julia/adcme/bin/make" GIT = "LibGit2" PYTHON = "/home/pkgeval/.julia/adcme/bin/python" TF_LIB_FILE = "/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/libtensorflow_framework.so.1" LIBCUDA = "" CUDA_INC = "" NINJA = "/home/pkgeval/.julia/adcme/bin/ninja" INCDIR = "/home/pkgeval/.julia/adcme/include" __STR__ = join([BINDIR,LIBDIR,TF_INC,TF_ABI,PREFIXDIR,CC,CXX,CMAKE,MAKE,GIT,PYTHON,TF_LIB_FILE,LIBCUDA,CUDA_INC,NINJA,INCDIR], ";") 2026-01-09 09:33:22.470661: I tensorflow/core/common_runtime/process_util.cc:115] Creating new thread pool with default inter op setting: 2. Tune using inter_op_parallelism_threads for best performance. Test Summary: | Pass Total Time indexing for rank 3 tensors | 3 3 8.2s [ Info: Changed to directory /home/pkgeval/.julia/adcme/lib/Libraries [ Info: Cloning from https://github.com/ADCMEMarket/Adept-2 to Adept-2... [ Info: Cloned https://github.com/ADCMEMarket/Adept-2 to Adept-2 [ Info: Made directory directory [ Info: Changed to directory build -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done JULIA=/opt/julia/bin/julia ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 13802 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_34528.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007577ebc31ff0 Total snapshots: 448. Utilization: 0% ╎448 @Base/task.jl:1168 wait_forever() 447╎ 448 @Base/task.jl:1246 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 13154 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_34528.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_34528.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000071fc72cc2b30 Total snapshots: 318. Utilization: 0% ╎318 @Base/task.jl:1168 wait_forever() 317╎ 318 @Base/task.jl:1246 wait() ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007786462f5d20 Total snapshots: 108. Utilization: 0% ╎108 @Base/task.jl:1168 wait_forever() 107╎ 108 @Base/task.jl:1246 wait() [13154] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ADCME/94vEM/test/layers.jl:15 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_34528.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 101529585 (Pool: 101527574; Big: 2011); GC: 62 PkgEval terminated after 2763.73s: test duration exceeded the time limit