Package evaluation to test PlutoDependencyExplorer on Julia 1.11.7 (58327cce5e*) started at 2025-10-28T15:24:53.679 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.75s ################################################################################ # Installation # Installing PlutoDependencyExplorer... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [72656b73] + PlutoDependencyExplorer v1.2.2 Updating `~/.julia/environments/v1.11/Manifest.toml` [21656369] + ExpressionExplorer v1.1.3 [72656b73] + PlutoDependencyExplorer v1.2.2 [2a0f44e3] + Base64 v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [d6f4376e] + Markdown v1.11.0 Installation completed after 1.27s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 12.22s ################################################################################ # Testing # Testing PlutoDependencyExplorer Status `/tmp/jl_5GESV3/Project.toml` [21656369] ExpressionExplorer v1.1.3 [72656b73] PlutoDependencyExplorer v1.2.2 [b77e0a4c] InteractiveUtils v1.11.0 [d6f4376e] Markdown v1.11.0 [44cfe95a] Pkg v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_5GESV3/Manifest.toml` [21656369] ExpressionExplorer v1.1.3 [72656b73] PlutoDependencyExplorer v1.2.2 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [83775a58] Zlib_jll v1.2.13+1 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Testing Running tests... Test Summary: | Pass Total Time Basic API | 2 2 19.3s WARNING: Method definition (::Type{Main.SimpleCell})(Any) in module Main at /home/pkgeval/.julia/packages/PlutoDependencyExplorer/BaZEm/test/basic.jl:6 overwritten at /home/pkgeval/.julia/packages/PlutoDependencyExplorer/BaZEm/test/imports.jl:7. Test Summary: | Pass Total Time external_package_names | 1 1 1.8s Test Summary: | Pass Total Time ImmutableCollections | 16 16 3.3s ┌ Info: PlutoDependencyExplorer tests: importing Pluto from │ pkg_source = │ PackageSpec( │ name = Pluto │ rev = main │ version = * └ ) Cloning git-repo `https://github.com/fonsp/Pluto.jl.git` Updating git-repo `https://github.com/fonsp/Pluto.jl.git` Resolving package versions... Updating `/tmp/jl_5GESV3/Project.toml` [c3e4b0f8] + Pluto v0.20.20 `https://github.com/fonsp/Pluto.jl.git#main` Updating `/tmp/jl_5GESV3/Manifest.toml` [d1d4a3ce] + BitFlags v0.1.9 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [5218b696] + Configurations v0.17.6 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [460bff9d] + ExceptionUnwrapping v0.1.11 [55351af7] + ExproniconLite v0.10.14 [828d9ff0] + GracefulPkg v2.4.2 [cd3eb016] + HTTP v1.10.19 [ac1192a8] + HypertextLiteral v0.9.5 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [8ac3fa9e] + LRUCache v1.6.2 [0e77f7df] + LazilyInitializedFields v1.3.0 [e6f89c97] + LoggingExtras v1.2.0 [6c6e2e6c] + MIMEs v1.1.0 [36869731] + Malt v1.3.0 [739be429] + MbedTLS v1.1.9 [99f44e22] + MsgPack v1.2.1 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [c3e4b0f8] + Pluto v0.20.20 `https://github.com/fonsp/Pluto.jl.git#main` [91cefc8d] + PrecompileSignatures v3.0.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [2792f1a3] + RegistryInstances v0.1.0 [05181044] + RelocatableFolders v1.0.1 [6c6a2e73] + Scratch v1.3.0 [777ac1f9] + SimpleBufferStream v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [410a4b4d] + Tricks v0.1.12 [5c2747f8] + URIs v1.6.1 [458c3c95] + OpenSSL_jll v3.5.4+0 [8ba89e20] + Distributed v1.11.0 [3fa0cd96] + REPL v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Precompiling Pluto... 64206.3 ms ✓ Pluto 1 dependency successfully precompiled in 65 seconds. 69 already precompiled. ┌ Info: PlutoDependencyExplorer tests: imported Pluto └ pkgversion(Pluto) = v"0.20.20" Test Summary: | Pass Total Time updated_topology identity | 13 13 11.2s [Worker 25]: Resolving package versions... [Worker 25]: Updating `~/.julia/scratchspaces/c3e4b0f8-55cb-11ea-2926-15256bba5781/pluto-boot-environment-1.11.7-0.20.20/KbvsjevyMpf/Project.toml` [Worker 25]: [dc6b355a] + PlutoRunner v30.31.32 `~/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner` [Worker 25]: Updating `~/.julia/scratchspaces/c3e4b0f8-55cb-11ea-2926-15256bba5781/pluto-boot-environment-1.11.7-0.20.20/KbvsjevyMpf/Manifest.toml` [Worker 25]: [dc6b355a] + PlutoRunner v30.31.32 `~/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner` [Worker 25]: [0dad84c5] + ArgTools v1.1.2 [Worker 25]: [56f22d72] + Artifacts v1.11.0 [Worker 25]: [2a0f44e3] + Base64 v1.11.0 [Worker 25]: [ade2ca70] + Dates v1.11.0 [Worker 25]: [f43a241f] + Downloads v1.6.0 [Worker 25]: [7b1f6079] + FileWatching v1.11.0 [Worker 25]: [b77e0a4c] + InteractiveUtils v1.11.0 [Worker 25]: [b27032c2] + LibCURL v0.6.4 [Worker 25]: [76f85450] + LibGit2 v1.11.0 [Worker 25]: [8f399da3] + Libdl v1.11.0 [Worker 25]: [56ddb016] + Logging v1.11.0 [Worker 25]: [d6f4376e] + Markdown v1.11.0 [Worker 25]: [ca575930] + NetworkOptions v1.2.0 [Worker 25]: [44cfe95a] + Pkg v1.11.0 [Worker 25]: [de0858da] + Printf v1.11.0 [Worker 25]: [3fa0cd96] + REPL v1.11.0 [Worker 25]: [9a3f8284] + Random v1.11.0 [Worker 25]: [ea8e919c] + SHA v0.7.0 [Worker 25]: [6462fe0b] + Sockets v1.11.0 [Worker 25]: [f489334b] + StyledStrings v1.11.0 [Worker 25]: [fa267f1f] + TOML v1.0.3 [Worker 25]: [a4e569a6] + Tar v1.10.0 [Worker 25]: [cf7118a7] + UUIDs v1.11.0 [Worker 25]: [4ec0a83e] + Unicode v1.11.0 [Worker 25]: [deac9b47] + LibCURL_jll v8.6.0+0 [Worker 25]: [e37daf67] + LibGit2_jll v1.7.2+0 [Worker 25]: [29816b5a] + LibSSH2_jll v1.11.0+1 [Worker 25]: [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [Worker 25]: [14a3606d] + MozillaCACerts_jll v2023.12.12 [Worker 25]: [83775a58] + Zlib_jll v1.2.13+1 [Worker 25]: [8e850ede] + nghttp2_jll v1.59.0+0 [Worker 25]: [3f19e933] + p7zip_jll v17.4.0+2 [Worker 25]: Precompiling PlutoRunner... [Worker 25]: 17479.2 ms ✓ PlutoRunner [Worker 25]: 1 dependency successfully precompiled in 18 seconds. 27 already precompiled. WARNING: Method definition inv(Float64) in module workspace#29 at /home/pkgeval/.julia/pluto_notebooks/Cute computation 11.jl#==#f7347636-b412-11f0-0424-7f0171c36d62:1 overwritten in module workspace#31 at /home/pkgeval/.julia/pluto_notebooks/Cute computation 12.jl#==#f8114af2-b412-11f0-21fb-f35c54f7183b:1. julia: /source/src/gf.c:2009: jl_method_table_add: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&method->primary_world); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == ~(size_t)0' failed. [11] signal 6 (-6): Aborted in expression starting at none:1 unknown function (ip: 0x769182fbfebc) gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x769182f5b394) __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_method_table_add at /source/src/gf.c:2009 ijl_method_table_insert at /source/src/gf.c:2233 delete_toplevel_methods at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner/src/evaluation/deleting globals.jl:181 try_delete_toplevel_methods at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner/src/evaluation/deleting globals.jl:199 #38 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner/src/evaluation/deleting globals.jl:48 unknown function (ip: 0x76916319e602) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 mapfilter at ./abstractset.jl:632 unknown function (ip: 0x76916311a99d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 filter at ./abstractset.jl:624 move_vars at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/runner/PlutoRunner/src/evaluation/deleting globals.jl:47 unknown function (ip: 0x76916311a54e) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 jfptr_eval_28355.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #remote_call_fetch#44 at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:436 remote_call_fetch at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:434 [inlined] #remote_call_wait#47 at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:447 [inlined] remote_call_wait at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:446 [inlined] remote_eval_wait at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:545 [inlined] remote_eval_wait at /home/pkgeval/.julia/packages/Malt/QnJNJ/src/Malt.jl:546 unknown function (ip: 0x769163772d46) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #move_vars#38 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/WorkspaceManager.jl:686 move_vars at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/WorkspaceManager.jl:670 [inlined] move_vars at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/WorkspaceManager.jl:670 [inlined] #run_reactive_core!#243 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Run.jl:172 run_reactive_core! at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Run.jl:44 unknown function (ip: 0x7691631060f6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #271 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Run.jl:486 unknown function (ip: 0x7691637509df) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 unknown function (ip: 0x7691637501b9) unknown function (ip: 0x76916375018d) withtoken at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Tokens.jl:19 #270 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Run.jl:462 [inlined] #262 at /home/pkgeval/.julia/packages/Pluto/3yT8W/src/evaluation/Tokens.jl:58 unknown function (ip: 0x76916375040f) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 Allocations: 48397697 (Pool: 48395663; Big: 2034); GC: 35 Testing failed after 283.15s ERROR: LoadError: Package PlutoDependencyExplorer errored during testing (received signal: 6) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval crashed after 321.03s: the process was aborted