Package evaluation to test Phonetics on Julia 1.11.7 (58327cce5e*) started at 2025-10-29T06:15:49.523 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.2s ################################################################################ # Installation # Installing Phonetics... Resolving package versions... Installed Conda ── v1.10.3 Installed PyCall ─ v1.96.4 Updating `~/.julia/environments/v1.11/Project.toml` [e3a49ea3] + Phonetics v0.6.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [6e4b80f9] + BenchmarkTools v1.6.3 [0e736298] + Bessels v0.2.8 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [fb6a15b2] + CloseOpenIntervals v0.1.13 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [717857b8] + DSP v0.8.4 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [aaaaaaaa] + DynamicAxisWarping v0.4.19 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.14.0 [f6369f11] + ForwardDiff v1.2.2 [14197337] + GenericLinearAlgebra v0.3.19 [fd0ad045] + GeometricalPredicates v0.4.2 [f67ccb44] + HDF5 v0.17.2 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.0 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.173 [ca7b5df7] + MFCC v0.3.6 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [b8f27783] + MathOptInterface v1.46.0 [442fdcdd] + Measures v0.3.2 [6fafb56a] + Memoization v0.2.2 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.6.7 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [69de0a69] + Parsers v2.8.3 [e3a49ea3] + Phonetics v0.6.0 [1d0040c9] + PolyesterWeave v0.2.2 [67491407] + Polyhedra v0.8.1 [f27b6e38] + Polynomials v4.1.0 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [49802e3a] + ProgressBars v1.5.1 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [a8468747] + QHull v0.2.6 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [25b0cc0c] + SlidingDistancesBase v0.3.7 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] + StructTypes v1.11.0 [ec057cc2] + StructUtils v2.5.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.72 [81def892] + VersionParsing v1.3.0 [8149f6b0] + WAV v1.2.0 [6e34b625] + Bzip2_jll v1.0.9+0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 78.42s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: Phonetics Failed to precompile Phonetics [e3a49ea3-7edf-49e1-b84f-839ab305a372] to "/home/pkgeval/.julia/compiled/v1.11/Phonetics/jl_aJM8sB". [ Info: Installing scipy.spatial via the Conda scipy package... [ Info: Running `conda install -q -y scipy` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - scipy The following packages will be downloaded: package | build ---------------------------|----------------- scipy-1.16.3 | py312h7a1785b_0 16.3 MB conda-forge ------------------------------------------------------------ Total: 16.3 MB The following NEW packages will be INSTALLED: scipy conda-forge/linux-64::scipy-1.16.3-py312h7a1785b_0 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done ERROR: LoadError: InitError: PyError (PyImport_ImportModule The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in from ._geometric_slerp import geometric_slerp File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in from scipy.spatial.distance import euclidean File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in from . import _hausdorff, _distance_pybind, _distance_wrap Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Bool; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized @ ./loading.jl:1210 [inlined] [9] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) @ Base ./loading.jl:1963 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2594 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] include(x::String) @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 [23] top-level scope @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14 [24] include @ ./Base.jl:562 [inlined] [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2922 [26] top-level scope @ stdin:6 during initialization of module QHull in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/VowelDensity.jl:5 in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 in expression starting at stdin:6 caused by: PyError (PyImport_ImportModule The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ModuleNotFoundError("No module named 'scipy'") Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Bool; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized @ ./loading.jl:1210 [inlined] [9] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) @ Base ./loading.jl:1963 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2594 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] include(x::String) @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 [23] top-level scope @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14 [24] include @ ./Base.jl:562 [inlined] [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2922 [26] top-level scope @ stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 468.95s ################################################################################ # Testing # Testing Phonetics Status `/tmp/jl_8286qv/Project.toml` [717857b8] DSP v0.8.4 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [aaaaaaaa] DynamicAxisWarping v0.4.19 [7a1cc6ca] FFTW v1.10.0 [fd0ad045] GeometricalPredicates v0.4.2 [ca7b5df7] MFCC v0.3.6 [442fdcdd] Measures v0.3.2 [e3a49ea3] Phonetics v0.6.0 [49802e3a] ProgressBars v1.5.1 [92933f4c] ProgressMeter v1.11.0 [a8468747] QHull v0.2.6 [3cdcf5f2] RecipesBase v1.3.4 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.7 [8149f6b0] WAV v1.2.0 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_8286qv/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [6e4b80f9] BenchmarkTools v1.6.3 [0e736298] Bessels v0.2.8 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.7 [fb6a15b2] CloseOpenIntervals v0.1.13 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [717857b8] DSP v0.8.4 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [aaaaaaaa] DynamicAxisWarping v0.4.19 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [1a297f60] FillArrays v1.14.0 [f6369f11] ForwardDiff v1.2.2 [14197337] GenericLinearAlgebra v0.3.19 [fd0ad045] GeometricalPredicates v0.4.2 [f67ccb44] HDF5 v0.17.2 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.0 [0f8b85d8] JSON3 v1.14.3 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.173 [ca7b5df7] MFCC v0.3.6 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [b8f27783] MathOptInterface v1.46.0 [442fdcdd] Measures v0.3.2 [6fafb56a] Memoization v0.2.2 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.6.7 [77ba4419] NaNMath v1.1.3 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 [e3a49ea3] Phonetics v0.6.0 [1d0040c9] PolyesterWeave v0.2.2 [67491407] Polyhedra v0.8.1 [f27b6e38] Polynomials v4.1.0 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [49802e3a] ProgressBars v1.5.1 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [a8468747] QHull v0.2.6 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [94e857df] SIMDTypes v0.1.0 [476501e8] 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Testing Running tests... Precompiling Phonetics... Info Given Phonetics was explicitly requested, output will be shown live  [ Info: Installing scipy.spatial via the Conda scipy package... [ Info: Running `conda install -q -y scipy` in root environment Channels:  - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done  # All requested packages already installed.  ERROR: LoadError: InitError: PyError (PyImport_ImportModule  The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall.  PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera).  Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.  ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)")  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in  from ._geometric_slerp import geometric_slerp  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in  from scipy.spatial.distance import euclidean  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in  from . import _hausdorff, _distance_pybind, _distance_wrap  Stacktrace:  [1] pyimport(name::String)  @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558  [2] pyimport_conda(modulename::String, condapkg::String, channel::String)  @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722  [3] pyimport_conda  @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined]  [4] __init__()  @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16  [5] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1378  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1366  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)  @ Base ./loading.jl:1254  [8] _include_from_serialized (repeats 2 times)  @ ./loading.jl:1210 [inlined]  [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2057  [10] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2527  [11] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [12] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [13] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [14] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [15] macro expansion  @ ./loading.jl:2314 [inlined]  [16] macro expansion  @ ./lock.jl:273 [inlined]  [17] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [18] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [19] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [20] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:562  [22] include(x::String)  @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1  [23] top-level scope  @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14  [24] include  @ ./Base.jl:562 [inlined]  [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2922  [26] top-level scope  @ stdin:6 during initialization of module QHull in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/VowelDensity.jl:5 in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 in expression starting at stdin:6  caused by: PyError (PyImport_ImportModule  The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall.  PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera).  Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia.  ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)")  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in  from ._geometric_slerp import geometric_slerp  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in  from scipy.spatial.distance import euclidean  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in  from . import _hausdorff, _distance_pybind, _distance_wrap  Stacktrace:  [1] pyimport(name::String)  @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558  [2] pyimport_conda(modulename::String, condapkg::String, channel::String)  @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716  [3] pyimport_conda  @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined]  [4] __init__()  @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16  [5] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1378  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1366  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)  @ Base ./loading.jl:1254  [8] _include_from_serialized (repeats 2 times)  @ ./loading.jl:1210 [inlined]  [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2057  [10] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2527  [11] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [12] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [13] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [14] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [15] macro expansion  @ ./loading.jl:2314 [inlined]  [16] macro expansion  @ ./lock.jl:273 [inlined]  [17] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [18] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [19] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [20] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:562  [22] include(x::String)  @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1  [23] top-level scope  @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14  [24] include  @ ./Base.jl:562 [inlined]  [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2922  [26] top-level scope  @ stdin:6 ✗ Phonetics 0 dependencies successfully precompiled in 55 seconds. 194 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: Phonetics Failed to precompile Phonetics [e3a49ea3-7edf-49e1-b84f-839ab305a372] to "/home/pkgeval/.julia/compiled/v1.11/Phonetics/jl_xHHtJp". [ Info: Installing scipy.spatial via the Conda scipy package... [ Info: Running `conda install -q -y scipy` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done # All requested packages already installed. ERROR: LoadError: InitError: PyError (PyImport_ImportModule The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in from ._geometric_slerp import geometric_slerp File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in from scipy.spatial.distance import euclidean File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in from . import _hausdorff, _distance_pybind, _distance_wrap Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] include(x::String) @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 [23] top-level scope @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14 [24] include @ ./Base.jl:562 [inlined] [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2922 [26] top-level scope @ stdin:6 during initialization of module QHull in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/VowelDensity.jl:5 in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 in expression starting at stdin:6 caused by: PyError (PyImport_ImportModule The Python package scipy.spatial could not be imported by pyimport. Usually this means that you did not install scipy.spatial in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.spatial module, you can use `pyimport_conda("scipy.spatial", PKG)`, where PKG is the Anaconda package that contains the module scipy.spatial, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in from ._geometric_slerp import geometric_slerp File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in from scipy.spatial.distance import euclidean File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in from . import _hausdorff, _distance_pybind, _distance_wrap Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ QHull ~/.julia/packages/QHull/omD8x/src/QHull.jl:16 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [11] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [15] macro expansion @ ./loading.jl:2314 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [18] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [19] invoke_in_world @ ./essentials.jl:1086 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [21] include(mod::Module, _path::String) @ Base ./Base.jl:562 [22] include(x::String) @ Phonetics ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:1 [23] top-level scope @ ~/.julia/packages/Phonetics/eugRD/src/Phonetics.jl:14 [24] include @ ./Base.jl:562 [inlined] [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2922 [26] top-level scope @ stdin: in expression starting at /home/pkgeval/.julia/packages/Phonetics/eugRD/test/runtests.jl:1 Testing failed after 68.23s ERROR: LoadError: Package Phonetics errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 645.57s: package fails to precompile