Package evaluation to test OptimalTransport on Julia 1.11.7 (58327cce5e*) started at 2025-10-29T00:26:16.626 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.73s ################################################################################ # Installation # Installing OptimalTransport... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [7e02d93a] + OptimalTransport v0.3.20 Updating `~/.julia/environments/v1.11/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [a9b6321e] + Atomix v1.1.2 [6e4b80f9] + BenchmarkTools v1.6.3 [d360d2e6] + ChainRulesCore v1.26.0 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [24df6009] + ExactOptimalTransport v0.2.5 [1a297f60] + FillArrays v1.14.0 [f6369f11] + ForwardDiff v1.2.2 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.6 [42fd0dbc] + IterativeSolvers v0.9.4 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.0 [0f8b85d8] + JSON3 v1.14.3 [63c18a36] + KernelAbstractions v0.9.38 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [b8f27783] + MathOptInterface v1.46.0 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.6.7 [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 [7e02d93a] + OptimalTransport v0.3.20 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [69de0a69] + Parsers v2.8.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e506255] + ScopedValues v1.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [856f2bd8] + StructTypes v1.11.0 [ec057cc2] + StructUtils v2.5.1 [3bb67fe8] + TranscodingStreams v0.11.3 [013be700] + UnsafeAtomics v0.3.0 [6e34b625] + Bzip2_jll v1.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.02s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 92.31s ################################################################################ # Testing # Testing OptimalTransport Status `/tmp/jl_tMyWs5/Project.toml` [b4f34e82] Distances v0.10.12 [24df6009] ExactOptimalTransport v0.2.5 [f6369f11] ForwardDiff v1.2.2 [42fd0dbc] IterativeSolvers v0.9.4 [2ab3a3ac] LogExpFunctions v0.3.29 [872c559c] NNlib v0.9.31 [7e02d93a] OptimalTransport v0.3.20 [3c485715] PythonOT v0.1.6 [189a3867] Reexport v1.2.2 [37e2e3b7] ReverseDiff v1.16.1 [1bc83da4] SafeTestsets v0.1.0 [2913bbd2] StatsBase v0.34.7 [37e2e46d] LinearAlgebra v1.11.0 [44cfe95a] Pkg v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_tMyWs5/Manifest.toml` [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [a9b6321e] Atomix v1.1.2 [6e4b80f9] BenchmarkTools v1.6.3 [d360d2e6] ChainRulesCore v1.26.0 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [24df6009] ExactOptimalTransport v0.2.5 [1a297f60] FillArrays v1.14.0 [f6369f11] ForwardDiff v1.2.2 [069b7b12] FunctionWrappers v1.1.3 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [92d709cd] IrrationalConstants v0.2.6 [42fd0dbc] IterativeSolvers v0.9.4 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.0 [0f8b85d8] JSON3 v1.14.3 [63c18a36] KernelAbstractions v0.9.38 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [b8f27783] MathOptInterface v1.46.0 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.6.7 [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 [7e02d93a] OptimalTransport v0.3.20 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [3c485715] PythonOT v0.1.6 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 [79098fc4] Rmath v0.9.0 [1bc83da4] SafeTestsets v0.1.0 [7e506255] ScopedValues v1.5.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.5.1 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.0 [81def892] VersionParsing v1.3.0 [6e34b625] Bzip2_jll v1.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling ReverseDiff... 22820.7 ms ✓ ReverseDiff 1 dependency successfully precompiled in 23 seconds. 33 already precompiled. Precompiling PythonOT... 4574.0 ms ✓ PythonOT 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. [ Info: Installing ot via the Conda pot package... [ Info: Running `conda config --add channels conda-forge --file /home/pkgeval/.julia/conda/3/x86_64/condarc-julia.yml --force` in root environment /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic( [ Info: Running `conda install -q -y pot` in root environment Channels: - conda-forge - defaults Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - pot The following packages will be downloaded: package | build ---------------------------|----------------- brotli-1.1.0 | hb9d3cd8_3 19 KB conda-forge brotli-bin-1.1.0 | hb9d3cd8_3 19 KB conda-forge contourpy-1.3.3 | py312hd9148b4_2 289 KB conda-forge cycler-0.12.1 | pyhd8ed1ab_1 13 KB conda-forge fonttools-4.60.1 | py312h8a5da7c_0 2.8 MB conda-forge freetype-2.14.1 | ha770c72_0 169 KB conda-forge kiwisolver-1.4.9 | py312h0a2e395_1 75 KB conda-forge lcms2-2.17 | h717163a_0 242 KB conda-forge lerc-4.0.0 | h0aef613_1 258 KB conda-forge libbrotlicommon-1.1.0 | hb9d3cd8_3 68 KB conda-forge libbrotlidec-1.1.0 | hb9d3cd8_3 32 KB conda-forge libbrotlienc-1.1.0 | hb9d3cd8_3 276 KB conda-forge libdeflate-1.24 | h86f0d12_0 71 KB conda-forge libfreetype-2.14.1 | ha770c72_0 7 KB conda-forge libfreetype6-2.14.1 | h73754d4_0 378 KB conda-forge libjpeg-turbo-3.1.0 | hb9d3cd8_0 614 KB conda-forge libpng-1.6.50 | h421ea60_1 310 KB conda-forge libtiff-4.7.1 | h8261f1e_0 427 KB conda-forge libwebp-base-1.6.0 | hd42ef1d_0 419 KB conda-forge libxcb-1.17.0 | h8a09558_0 387 KB conda-forge matplotlib-base-3.10.7 | py312he3d6523_0 8.1 MB conda-forge munkres-1.1.4 | pyhd8ed1ab_1 15 KB conda-forge openjpeg-2.5.4 | h55fea9a_0 347 KB conda-forge pillow-12.0.0 | py312h0889fd4_0 1004 KB conda-forge pot-0.9.6.post1 | py312hf79963d_0 621 KB conda-forge pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge pyparsing-3.2.5 | pyhcf101f3_0 102 KB conda-forge python-dateutil-2.9.0.post0| pyhe01879c_2 228 KB conda-forge qhull-2020.2 | h434a139_5 540 KB conda-forge scipy-1.16.3 | py312h7a1785b_0 16.3 MB conda-forge six-1.17.0 | pyhe01879c_1 18 KB conda-forge unicodedata2-16.0.0 | py312h4c3975b_1 395 KB conda-forge xorg-libxau-1.0.12 | hb9d3cd8_0 14 KB conda-forge xorg-libxdmcp-1.1.5 | hb9d3cd8_0 19 KB conda-forge zlib-ng-2.2.5 | hde8ca8f_0 108 KB conda-forge ------------------------------------------------------------ Total: 34.6 MB The following NEW packages will be INSTALLED: brotli conda-forge/linux-64::brotli-1.1.0-hb9d3cd8_3 brotli-bin conda-forge/linux-64::brotli-bin-1.1.0-hb9d3cd8_3 contourpy conda-forge/linux-64::contourpy-1.3.3-py312hd9148b4_2 cycler conda-forge/noarch::cycler-0.12.1-pyhd8ed1ab_1 fonttools conda-forge/linux-64::fonttools-4.60.1-py312h8a5da7c_0 freetype conda-forge/linux-64::freetype-2.14.1-ha770c72_0 kiwisolver conda-forge/linux-64::kiwisolver-1.4.9-py312h0a2e395_1 lcms2 conda-forge/linux-64::lcms2-2.17-h717163a_0 lerc conda-forge/linux-64::lerc-4.0.0-h0aef613_1 libbrotlicommon conda-forge/linux-64::libbrotlicommon-1.1.0-hb9d3cd8_3 libbrotlidec conda-forge/linux-64::libbrotlidec-1.1.0-hb9d3cd8_3 libbrotlienc conda-forge/linux-64::libbrotlienc-1.1.0-hb9d3cd8_3 libdeflate conda-forge/linux-64::libdeflate-1.24-h86f0d12_0 libfreetype conda-forge/linux-64::libfreetype-2.14.1-ha770c72_0 libfreetype6 conda-forge/linux-64::libfreetype6-2.14.1-h73754d4_0 libjpeg-turbo conda-forge/linux-64::libjpeg-turbo-3.1.0-hb9d3cd8_0 libpng conda-forge/linux-64::libpng-1.6.50-h421ea60_1 libtiff conda-forge/linux-64::libtiff-4.7.1-h8261f1e_0 libwebp-base conda-forge/linux-64::libwebp-base-1.6.0-hd42ef1d_0 libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0 matplotlib-base conda-forge/linux-64::matplotlib-base-3.10.7-py312he3d6523_0 munkres conda-forge/noarch::munkres-1.1.4-pyhd8ed1ab_1 openjpeg conda-forge/linux-64::openjpeg-2.5.4-h55fea9a_0 pillow conda-forge/linux-64::pillow-12.0.0-py312h0889fd4_0 pot conda-forge/linux-64::pot-0.9.6.post1-py312hf79963d_0 pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002 pyparsing conda-forge/noarch::pyparsing-3.2.5-pyhcf101f3_0 python-dateutil conda-forge/noarch::python-dateutil-2.9.0.post0-pyhe01879c_2 qhull conda-forge/linux-64::qhull-2020.2-h434a139_5 scipy conda-forge/linux-64::scipy-1.16.3-py312h7a1785b_0 six conda-forge/noarch::six-1.17.0-pyhe01879c_1 unicodedata2 conda-forge/linux-64::unicodedata2-16.0.0-py312h4c3975b_1 xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.12-hb9d3cd8_0 xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb9d3cd8_0 zlib-ng conda-forge/linux-64::zlib-ng-2.2.5-hde8ca8f_0 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Sinkhorn Gibbs: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: InitError: PyError (PyImport_ImportModule The Python package ot could not be imported by pyimport. Usually this means that you did not install ot in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the ot module, you can use `pyimport_conda("ot", PKG)`, where PKG is the Anaconda package that contains the module ot, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_distance_pybind.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/ot/__init__.py", line 20, in from . import lp File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/ot/lp/__init__.py", line 12, in from ._network_simplex import emd, emd2 File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/ot/lp/_network_simplex.py", line 14, in from ..utils import list_to_array, check_number_threads File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/ot/utils.py", line 14, in from scipy.spatial.distance import cdist File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/__init__.py", line 116, in from ._geometric_slerp import geometric_slerp File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/_geometric_slerp.py", line 7, in from scipy.spatial.distance import euclidean File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/spatial/distance.py", line 122, in from . import _hausdorff, _distance_pybind, _distance_wrap Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722 [3] __init__() @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/PythonOT.jl:24 [4] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [5] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [6] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [7] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [9] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [10] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [11] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [12] invoke_in_world @ ./essentials.jl:1086 [inlined] [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [14] macro expansion @ ./loading.jl:2314 [inlined] [15] macro expansion @ ./lock.jl:273 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [17] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [18] invoke_in_world @ ./essentials.jl:1086 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [20] include(mod::Module, _path::String) @ Base ./Base.jl:562 [21] include(x::String) @ Main.var"##Sinkhorn Gibbs#233" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [22] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:17 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:17 [inlined] [25] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [26] eval(m::Module, e::Any) @ Core ./boot.jl:430 [27] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [28] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [29] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [30] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [31] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [32] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [33] include(fname::String) @ Main ./sysimg.jl:38 [34] top-level scope @ none:6 during initialization of module PythonOT in expression starting at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_gibbs.jl:7 caused by: PyError (PyImport_ImportModule The Python package ot could not be imported by pyimport. Usually this means that you did not install ot in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the ot module, you can use `pyimport_conda("ot", PKG)`, where PKG is the Anaconda package that contains the module ot, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ModuleNotFoundError("No module named 'ot'") Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716 [3] __init__() @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/PythonOT.jl:24 [4] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [5] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [6] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [7] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [9] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [10] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [11] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [12] invoke_in_world @ ./essentials.jl:1086 [inlined] [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [14] macro expansion @ ./loading.jl:2314 [inlined] [15] macro expansion @ ./lock.jl:273 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [17] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [18] invoke_in_world @ ./essentials.jl:1086 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [20] include(mod::Module, _path::String) @ Base ./Base.jl:562 [21] include(x::String) @ Main.var"##Sinkhorn Gibbs#233" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [22] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:17 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [24] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:17 [inlined] [25] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [26] eval(m::Module, e::Any) @ Core ./boot.jl:430 [27] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [28] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [29] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [30] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [31] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [32] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [33] include(fname::String) @ Main ./sysimg.jl:38 [34] top-level scope @ none:6 example: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_stabilized.jl:31 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] sinkhorn(μ::Vector{Float64}, ν::Vector{Float64}, C::Matrix{Float64}, ε::Float64; kwargs::@Kwargs{method::String, stopThr::Float64}) @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/lib.jl:194 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_stabilized.jl:40 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_stabilized.jl:33 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_stabilized.jl:18 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Stabilized Sinkhorn#234" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:20 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:20 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:19 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [22] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [23] include(fname::String) @ Main ./sysimg.jl:38 [24] top-level scope @ none:6 example: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_epsscaling.jl:31 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] sinkhorn(μ::Vector{Float64}, ν::Vector{Float64}, C::Matrix{Float64}, ε::Float64; kwargs::@Kwargs{method::String, stopThr::Float64}) @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/lib.jl:194 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_epsscaling.jl:33 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_epsscaling.jl:33 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_epsscaling.jl:18 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Sinkhorn with ε-scaling#235" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:23 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:23 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:22 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [22] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [23] include(fname::String) @ Main ./sysimg.jl:38 [24] top-level scope @ none:6 example: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_unbalanced.jl:17 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] sinkhorn_unbalanced(μ::Vector{Float64}, ν::Vector{Float64}, C::Matrix{Float64}, ε::Float64, λ::Int64; kwargs::@Kwargs{reg_type::String, stopThr::Float64}) @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/lib.jl:337 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_unbalanced.jl:29 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_unbalanced.jl:18 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_unbalanced.jl:14 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Unbalanced Sinkhorn#236" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:26 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:26 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:25 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [22] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [23] include(fname::String) @ Main ./sysimg.jl:38 [24] top-level scope @ none:6 example: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:29 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] barycenter(A::Matrix{Float64}, C::Matrix{Float64}, ε::Float64; kwargs::@Kwargs{weights::Vector{Float64}, stopThr::Float64}) @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/lib.jl:431 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:33 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:30 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:16 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Sinkhorn barycenter#237" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:29 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:29 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:28 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [22] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [23] include(fname::String) @ Main ./sysimg.jl:38 [24] top-level scope @ none:6 Float32: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:38 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] barycenter(A::Matrix{Float32}, C::Matrix{Float32}, ε::Float32; kwargs::@Kwargs{weights::Vector{Float32}, stopThr::Float64}) @ PythonOT ~/.julia/packages/PythonOT/6GILI/src/lib.jl:431 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:45 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:39 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/entropic/sinkhorn_barycenter.jl:16 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Sinkhorn barycenter#237" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:29 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:29 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:28 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:16 [inlined] [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [22] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [23] include(fname::String) @ Main ./sysimg.jl:38 [24] top-level scope @ none:6 quadreg: Error During Test at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/quadratic.jl:14 Got exception outside of a @test ArgumentError: ref of NULL PyObject Stacktrace: [1] _getproperty(o::PyCall.PyObject, s::Symbol) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:299 [2] __getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:312 [inlined] [3] getproperty @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:318 [inlined] [4] smooth_ot_dual(μ::Vector{Float64}, ν::Vector{Float64}, C::Matrix{Float64}, ε::Float64; kwargs::@Kwargs{stopThr::Float64}) @ PythonOT.Smooth ~/.julia/packages/PythonOT/6GILI/src/smooth.jl:57 [5] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/quadratic.jl:29 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [7] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/quadratic.jl:15 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [9] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/quadratic.jl:14 [10] include(mod::Module, _path::String) @ Base ./Base.jl:562 [11] include(x::String) @ Main.var"##Quadratically regularized OT#239" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [12] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:37 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [14] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:37 [inlined] [15] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [16] eval(m::Module, e::Any) @ Core ./boot.jl:430 [17] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [18] macro expansion @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:36 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [20] top-level scope @ ~/.julia/packages/OptimalTransport/IscgL/test/runtests.jl:10 [21] include(fname::String) @ Main ./sysimg.jl:38 [22] top-level scope @ none:6 Activating project at `~/.julia/packages/OptimalTransport/IscgL/test/gpu` Updating `~/.julia/packages/OptimalTransport/IscgL/test/gpu/Project.toml` [052768ef] + CUDA v5.9.2 Updating `~/.julia/packages/OptimalTransport/IscgL/test/gpu/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.4.0 [a9b6321e] + Atomix v1.1.2 [ab4f0b2a] + BFloat16s v0.6.0 [fa961155] + CEnum v0.5.0 [052768ef] + CUDA v5.9.2 [1af6417a] + CUDA_Runtime_Discovery v1.0.0 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [e2ba6199] + ExprTools v0.1.10 [53c48c17] + FixedPointNumbers v0.8.5 [0c68f7d7] + GPUArrays v11.2.6 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.7.2 [096a3bc2] + GPUToolbox v1.0.0 [076d061b] + HashArrayMappedTries v0.2.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.38 [929cbde3] + LLVM v9.4.4 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [5da4648a] + NVTX v1.0.1 [bac558e1] + OrderedCollections v1.8.1 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [e689c965] + Tracy v0.1.6 [013be700] + UnsafeAtomics v0.3.0 [d1e2174e] + CUDA_Compiler_jll v0.3.0+0 [4ee394cb] + CUDA_Driver_jll v13.0.2+0 [76a88914] + CUDA_Runtime_jll v0.19.2+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] + LLVMExtra_jll v0.0.38+0 [ad6e5548] + LibTracyClient_jll v0.9.1+6 [e98f9f5b] + NVTX_jll v3.2.2+0 [1e29f10c] + demumble_jll v1.3.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` julia: /source/src/gc.c:1315: jl_gc_pool_alloc_inner: Assertion `__extension__ ({ __auto_type __atomic_load_ptr = (&ptls->gc_state); __typeof__ (*__atomic_load_ptr) __atomic_load_tmp; __atomic_load (__atomic_load_ptr, &__atomic_load_tmp, (memory_order_relaxed)); __atomic_load_tmp; }) == 0' failed. [283] signal 6 (-6): Aborted in expression starting at /home/pkgeval/.julia/packages/OptimalTransport/IscgL/test/gpu/simple_gpu.jl:3 unknown function (ip: 0x78c6f4c5bebc) gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x78c6f4bf7394) __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jl_gc_pool_alloc_inner at /source/src/gc.c:1315 ijl_alloc_string at /source/src/array.c:314 [inlined] ijl_alloc_string at /source/src/array.c:297 ijl_pchar_to_string at /source/src/array.c:330 ijl_vexceptionf at /source/src/rtutils.c:64 ijl_errorf at /source/src/rtutils.c:77 ijl_load_dynamic_library at /source/src/dlload.c:388 jl_get_library_ at /source/src/runtime_ccall.cpp:45 [inlined] jl_get_library_ at /source/src/runtime_ccall.cpp:29 ijl_lazy_load_and_lookup at /source/src/runtime_ccall.cpp:73 macro expansion at /home/pkgeval/.julia/packages/GPUToolbox/JLBB1/src/ccalls.jl:143 [inlined] macro expansion at /home/pkgeval/.julia/packages/CUDA/UurkZ/lib/cudadrv/libcuda.jl:3853 [inlined] #174 at /home/pkgeval/.julia/packages/GPUToolbox/JLBB1/src/ccalls.jl:34 unknown function (ip: 0x78c6b4b647be) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 unknown function (ip: 0x78c6b4b64689) unknown function (ip: 0x78c6b4b64627) check at /home/pkgeval/.julia/packages/CUDA/UurkZ/lib/cudadrv/libcuda.jl:35 unknown function (ip: 0x78c6b4b64582) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 unknown function (ip: 0x78c6b4b64529) unknown function (ip: 0x78c6b4b644be) cuDriverGetVersion at /home/pkgeval/.julia/packages/GPUToolbox/JLBB1/src/ccalls.jl:33 unknown function (ip: 0x78c6b4b64412) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 unknown function (ip: 0x78c6b4b64379) unknown function (ip: 0x78c6b4b6431a) set_driver_version at /home/pkgeval/.julia/packages/CUDA/UurkZ/lib/cudadrv/version.jl:8 unknown function (ip: 0x78c6b4b64287) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 unknown function (ip: 0x78c6b4b63f69) unknown function (ip: 0x78c6b4b63cc6) __init__ at /home/pkgeval/.julia/packages/CUDA/UurkZ/src/initialization.jl:62 unknown function (ip: 0x78c6b4b63c43) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_module_run_initializer at /source/src/toplevel.c:76 run_module_init at ./loading.jl:1378 register_restored_modules at ./loading.jl:1366 #_include_from_serialized#1082 at ./loading.jl:1254 _include_from_serialized at ./loading.jl:1210 [inlined] _include_from_serialized at ./loading.jl:1210 [inlined] #_require_search_from_serialized#1105 at ./loading.jl:2057 _require_search_from_serialized at ./loading.jl:1969 jfptr__require_search_from_serialized_44887.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _require at ./loading.jl:2527 __require_prelocked at ./loading.jl:2388 jfptr___require_prelocked_71343.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] _require_prelocked at ./loading.jl:2375 macro expansion at ./loading.jl:2314 [inlined] macro expansion at ./lock.jl:273 [inlined] __require at ./loading.jl:2271 jfptr___require_71274.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] require at ./loading.jl:2260 jfptr_require_71271.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] call_require at /source/src/toplevel.c:486 [inlined] eval_import_path at /source/src/toplevel.c:523 jl_toplevel_eval_flex at /source/src/toplevel.c:759 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./Base.jl:562 jfptr_include_47022.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 include at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 unknown function (ip: 0x78c6b4b41e12) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 jfptr_eval_28355.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./sysimg.jl:38 unknown function (ip: 0x78c6f36ca082) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:289 _start at ./client.jl:524 jfptr__start_73678.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x78c6f4bf8249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) Testing failed after 890.48s ERROR: LoadError: Package OptimalTransport errored during testing (received signal: 6) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval crashed after 1051.31s: the process was aborted