Package evaluation to test IgBLAST on Julia 1.11.7 (58327cce5e*) started at 2025-10-28T17:40:25.244


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.66s


################################################################################
# Installation
#

Installing IgBLAST...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [0b79348f] + IgBLAST v0.0.5
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [67c07d97] + Automa v1.1.0
  [47718e42] + BioGenerics v0.1.5
  [7e6ae17a] + BioSequences v3.5.0
  [3c28c6f8] + BioSymbols v5.2.0
  [944b1d66] + CodecZlib v0.7.8
  [c2308a5c] + FASTX v2.1.7
  [0b79348f] + IgBLAST v0.0.5
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.5.0
  [92933f4c] + ProgressMeter v1.11.0
  [fdea26ae] + SIMD v3.7.2
  [354b36f9] + StringViews v1.3.5
  [3bb67fe8] + TranscodingStreams v0.11.3
  [7200193e] + Twiddle v1.1.2
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.16s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 23.81s


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# Testing
#

     Testing IgBLAST
      Status `/tmp/jl_85pZDh/Project.toml`
  [4c88cf16] Aqua v0.8.14
  [7e6ae17a] BioSequences v3.5.0
  [944b1d66] CodecZlib v0.7.8
  [c2308a5c] FASTX v2.1.7
  [0b79348f] IgBLAST v0.0.5
  [92933f4c] ProgressMeter v1.11.0
  [3bb67fe8] TranscodingStreams v0.11.3
  [56f22d72] Artifacts v1.11.0
  [44cfe95a] Pkg v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_85pZDh/Manifest.toml`
  [4c88cf16] Aqua v0.8.14
  [67c07d97] Automa v1.1.0
  [47718e42] BioGenerics v0.1.5
  [7e6ae17a] BioSequences v3.5.0
  [3c28c6f8] BioSymbols v5.2.0
  [944b1d66] CodecZlib v0.7.8
  [34da2185] Compat v4.18.1
  [c2308a5c] FASTX v2.1.7
  [0b79348f] IgBLAST v0.0.5
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.5.0
  [92933f4c] ProgressMeter v1.11.0
  [fdea26ae] SIMD v3.7.2
  [354b36f9] StringViews v1.3.5
  [3bb67fe8] TranscodingStreams v0.11.3
  [7200193e] Twiddle v1.1.2
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [83775a58] Zlib_jll v1.2.13+1
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary: | Pass  Total   Time
Aqua.jl       |   11     11  54.9s
[ Info: IgBLAST version 1.22.0 is already installed.


Building a new DB, current time: 10/28/2025 17:42:24
New DB name:   /tmp/jl_vG4asG/V_db.fasta
New DB title:  /tmp/jl_vG4asG/V_db.fasta
Sequence type: Nucleotide
Keep MBits: T
Maximum file size: 3000000000B
Adding sequences from FASTA; added 1 sequences in 0.000389099 seconds.




Building a new DB, current time: 10/28/2025 17:42:24
New DB name:   /tmp/jl_vG4asG/D_db.fasta
New DB title:  /tmp/jl_vG4asG/D_db.fasta
Sequence type: Nucleotide
Keep MBits: T
Maximum file size: 3000000000B
Adding sequences from FASTA; added 1 sequences in 0.000408888 seconds.




Building a new DB, current time: 10/28/2025 17:42:24
New DB name:   /tmp/jl_vG4asG/J_db.fasta
New DB title:  /tmp/jl_vG4asG/J_db.fasta
Sequence type: Nucleotide
Keep MBits: T
Maximum file size: 3000000000B
Adding sequences from FASTA; added 1 sequences in 0.000411987 seconds.


Test Summary: | Pass  Total   Time
IgBLAST.jl    |   11     11  19.7s
     Testing IgBLAST tests passed 

Testing completed after 86.87s

PkgEval succeeded after 131.44s