Package evaluation to test HiddenMarkovModels on Julia 1.11.7 (58327cce5e*) started at 2025-10-28T19:08:00.125 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.33s ################################################################################ # Installation # Installing HiddenMarkovModels... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [84ca31d5] + HiddenMarkovModels v0.7.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [dce04be8] + ArgCheck v2.5.0 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [b429d917] + DensityInterface v0.4.0 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.14.0 [84ca31d5] + HiddenMarkovModels v0.7.0 [34004b35] + HypergeometricFunctions v0.3.28 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [21216c6a] + Preferences v1.5.0 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.9.0 [276daf66] + SpecialFunctions v2.6.1 [82ae8749] + StatsAPI v1.7.1 [4c63d2b9] + StatsFuns v1.5.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Installation completed after 5.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 59.38s ################################################################################ # Testing # Testing HiddenMarkovModels Status `/tmp/jl_sWUSez/Project.toml` [4c88cf16] Aqua v0.8.14 [b0b7db55] ComponentArrays v0.15.29 [b429d917] DensityInterface v0.4.0 [31c24e10] Distributions v0.25.122 [e30172f5] Documenter v1.15.0 [7da242da] Enzyme v0.13.93 [f6369f11] ForwardDiff v1.2.2 [84ca31d5] HiddenMarkovModels v0.7.0 ⌅ [c3a54625] JET v0.9.20 [98e50ef6] JuliaFormatter v2.1.6 [aa2f6b4e] LogarithmicNumbers v1.4.1 [eff96d63] Measurements v2.14.1 [860ef19b] StableRNGs v1.0.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [e88e6eb3] Zygote v0.7.10 [37e2e46d] LinearAlgebra v1.11.0 [44cfe95a] Pkg v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_sWUSez/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 [fa961155] CEnum v0.5.0 [49dc2e85] Calculus v0.5.2 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 ⌅ [da1fd8a2] CodeTracking v1.3.9 [944b1d66] CodecZlib v0.7.8 [a80b9123] CommonMark v0.9.1 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [b0b7db55] ComponentArrays v0.15.29 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.15.0 [7da242da] Enzyme v0.13.93 [f151be2c] EnzymeCore v0.8.15 [e2ba6199] ExprTools v0.1.10 [1a297f60] FillArrays v1.14.0 [f6369f11] ForwardDiff v1.2.2 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.7.2 [d7ba0133] Git v1.5.0 [c27321d9] Glob v1.3.1 [84ca31d5] HiddenMarkovModels v0.7.0 [34004b35] HypergeometricFunctions v0.3.28 ⌅ [b5f81e59] IOCapture v0.2.5 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [c3a54625] JET v0.9.20 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.0 [98e50ef6] JuliaFormatter v2.1.6 ⌅ [aa1ae85d] JuliaInterpreter v0.9.46 ⌅ [70703baa] JuliaSyntax v0.4.10 [929cbde3] LLVM v9.4.4 [0e77f7df] LazilyInitializedFields v1.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [aa2f6b4e] LogarithmicNumbers v1.4.1 ⌃ [6f1432cf] LoweredCodeUtils v3.2.2 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [eff96d63] Measurements v2.14.1 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [d8793406] ObjectFile v0.5.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [431bcebd] SciMLPublic v1.0.0 [6c6a2e73] Scratch v1.3.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [09ab397b] StructArrays v0.7.2 [53d494c1] StructIO v0.3.1 [ec057cc2] StructUtils v2.5.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [7cc45869] Enzyme_jll v0.0.205+0 [2e619515] Expat_jll v2.7.3+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.51.2+0 [dad2f222] LLVMExtra_jll v0.0.38+0 [ad6e5548] LibTracyClient_jll v0.9.1+6 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.2.1+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling HiddenMarkovModels... 8323.5 ms ✓ HiddenMarkovModels 1 dependency successfully precompiled in 9 seconds. 44 already precompiled. Precompiling JuliaFormatter... 15199.5 ms ✓ CommonMark 69628.8 ms ✓ JuliaFormatter 2 dependencies successfully precompiled in 85 seconds. 8 already precompiled. Resolving package versions... Updating `/tmp/jl_sWUSez/Project.toml` [619c5ee3] + HMMTest v0.1.0 `~/.julia/packages/HiddenMarkovModels/Kmgf4/libs/HMMTest` Updating `/tmp/jl_sWUSez/Manifest.toml` [6e4b80f9] + BenchmarkTools v1.6.3 [619c5ee3] + HMMTest v0.1.0 `~/.julia/packages/HiddenMarkovModels/Kmgf4/libs/HMMTest` [9abbd945] + Profile v1.11.0 Precompiling HiddenMarkovModelsDistributionsExt... 2255.8 ms ✓ HiddenMarkovModels → HiddenMarkovModelsDistributionsExt 2508.5 ms ✓ Distributions → DistributionsDensityInterfaceExt 2560.4 ms ✓ Distributions → DistributionsChainRulesCoreExt 3 dependencies successfully precompiled in 8 seconds. 63 already precompiled. Precompiling Zygote... 10326.1 ms ✓ ChainRules 64132.1 ms ✓ Zygote 2 dependencies successfully precompiled in 75 seconds. 63 already precompiled. Precompiling ComponentArrays... 2630.0 ms ✓ StaticArrayInterface 1803.1 ms ✓ ComponentArrays 2 dependencies successfully precompiled in 5 seconds. 23 already precompiled. Precompiling ArrayInterfaceChainRulesExt... 1532.5 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 2 seconds. 40 already precompiled. Precompiling ComponentArraysZygoteExt... 3795.1 ms ✓ ComponentArrays → ComponentArraysZygoteExt 1 dependency successfully precompiled in 5 seconds. 78 already precompiled. Precompiling Enzyme... 44758.0 ms ✓ GPUCompiler Info Given Enzyme was explicitly requested, output will be shown live  WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. 135691.2 ms ✓ Enzyme 2 dependencies successfully precompiled in 181 seconds. 43 already precompiled. 1 dependency had output during precompilation: ┌ Enzyme │ [Output was shown above] └ Precompiling QuadGKEnzymeExt... 77355.4 ms ✓ QuadGK → QuadGKEnzymeExt 1 dependency successfully precompiled in 78 seconds. 48 already precompiled. Precompiling EnzymeLogExpFunctionsExt... 72712.7 ms ✓ Enzyme → EnzymeLogExpFunctionsExt 1 dependency successfully precompiled in 73 seconds. 48 already precompiled. Precompiling EnzymeChainRulesCoreExt... 69926.8 ms ✓ Enzyme → EnzymeChainRulesCoreExt 1 dependency successfully precompiled in 70 seconds. 49 already precompiled. Precompiling EnzymeSpecialFunctionsExt... 67709.0 ms ✓ Enzyme → EnzymeSpecialFunctionsExt 1 dependency successfully precompiled in 68 seconds. 53 already precompiled. Precompiling EnzymeGPUArraysCoreExt... 70875.0 ms ✓ Enzyme → EnzymeGPUArraysCoreExt 1 dependency successfully precompiled in 71 seconds. 50 already precompiled. Precompiling HMMTest... 3938.0 ms ✓ BenchmarkTools 11492.9 ms ✓ HMMTest 2 dependencies successfully precompiled in 17 seconds. 74 already precompiled. Precompiling LogarithmicNumbersForwardDiffExt... 2028.4 ms ✓ LogarithmicNumbers → LogarithmicNumbersForwardDiffExt 1 dependency successfully precompiled in 3 seconds. 21 already precompiled. Precompiling StructUtilsMeasurementsExt... 1138.0 ms ✓ StructUtils → StructUtilsMeasurementsExt 1 dependency successfully precompiled in 1 seconds. 7 already precompiled. Precompiling MeasurementsSpecialFunctionsExt... 2328.4 ms ✓ Measurements → MeasurementsSpecialFunctionsExt 1 dependency successfully precompiled in 2 seconds. 15 already precompiled. ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/HdXI4/src/utilities/utilities.jl:665 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 71 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm19SmallPtrSetImplBase14insert_imp_bigEPKv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) unknown function (ip: 0x7ffdaf7db7af) unknown function (ip: 0x7ffdaf7dc7c7) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7b97fab66b02) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2146 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2086 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1935 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1793 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1902 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7b97fab5bfdd) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1849 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1841 unknown function (ip: 0x7b97fab50566) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2067 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7b97fab5026d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7b97fab4fc3d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7b97fab4c0d6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./Base.jl:562 jfptr_include_47022.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 exec_options at ./client.jl:316 _start at ./client.jl:524 jfptr__start_73678.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7b97fc0e8249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007b97ef1fc010 Total snapshots: 16. Utilization: 0% ╎16 @Base/client.jl:524; _start() ╎ 16 @Base/client.jl:316; exec_options(opts::Base.JLOptions) ╎ 16 @Base/Base.jl:562; include(mod::Module, _path::String) ╎ 16 @Base/loading.jl:2835; _include(mapexpr::Function, mod::Module, _path:… ╎ 16 @Base/loading.jl:2775; include_string(mapexpr::typeof(identity), mod:… ╎ 16 @Base/boot.jl:430; eval ╎ ╎ 16 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 16 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 16 @Pkg/src/API.jl:147; test ╎ ╎ 16 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 16 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 16 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec};… ╎ ╎ ╎ 16 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 16 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 16 …src/Operations.jl:2011; test ╎ ╎ ╎ 16 …src/Operations.jl:2067; test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 16 …rc/Operations.jl:1841; kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 16 …rc/Operations.jl:1849; #sandbox#115 ╎ ╎ ╎ ╎ 16 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 16 @Base/file.jl:815; mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 16 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 16 …/Operations.jl:1902; (::Pkg.Operations.var"#116#121… ╎ ╎ ╎ ╎ ╎ 16 …/Operations.jl:1793; with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 16 …Operations.jl:1935; (::Pkg.Operations.var"#118#12… ╎ ╎ ╎ ╎ ╎ 16 @Base/env.jl:265; withenv(::Pkg.Operations.var"#1… ╎ ╎ ╎ ╎ ╎ 16 …Operations.jl:2086; (::Pkg.Operations.var"#131#… ╎ ╎ ╎ ╎ ╎ ╎ 16 …perations.jl:2146; subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 16 …e/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 16 …e/process.jl:694; wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 16 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 16 …ondition.jl:130; wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 16 …ase/task.jl:1021; wait() 15╎ ╎ ╎ ╎ ╎ ╎ ╎ 16 …ase/task.jl:1012; poptask(W::Base.Intrus… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [71] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/test/correctness.jl:104 _ZNK4llvm6object7ELFFileINS0_7ELFTypeILNS_7support10endiannessE1ELb1EEEE25getSectionContentsAsArrayINS0_12Elf_Sym_ImplIS5_EEEENS_8ExpectedINS_8ArrayRefIT_EEEERKNS0_13Elf_Shdr_ImplIS5_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) unknown function (ip: 0x74e63a6a0daf) unknown function (ip: 0x1024400000024) unknown function (ip: (nil)) Allocations: 727893953 (Pool: 727884951; Big: 9002); GC: 327 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 profile_printing_listener at ./Base.jl:582 #1192 at ./Base.jl:622 jfptr_YY.1192_76252.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 21715222 (Pool: 21713458; Big: 1764); GC: 20 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:35 #schedule#763 at ./task.jl:884 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 jfptr_uv_writecb_task_67129.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jlcapi_uv_writecb_task_67593.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48479.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 showerror at ./errorshow.jl:152 unknown function (ip: 0x7b97fab73c26) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _atexit at ./initdefs.jl:454 jfptr__atexit_69637.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2727.94s: test duration exceeded the time limit