Package evaluation to test FormulaCompiler on Julia 1.11.7 (58327cce5e*) started at 2025-10-29T04:49:17.732 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.57s ################################################################################ # Installation # Installing FormulaCompiler... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [72341345] + FormulaCompiler v1.1.3 Updating `~/.julia/environments/v1.11/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4c555306] + ArrayLayouts v1.12.0 [69666777] + Arrow v2.8.0 [31f734f8] + ArrowTypes v2.3.0 [093aae92] + BSplineKit v0.19.1 [aae01518] + BandedMatrices v1.10.1 [c3b6d118] + BitIntegers v0.3.5 [fa961155] + CEnum v0.5.0 ⌅ [324d7699] + CategoricalArrays v0.10.8 [5ba52731] + CodecLz4 v0.4.6 [6b39b394] + CodecZstd v0.8.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 [442a2c76] + FastGaussQuadrature v1.1.0 [1a297f60] + FillArrays v1.14.0 [72341345] + FormulaCompiler v1.1.3 [f6369f11] + ForwardDiff v1.2.2 [38e38edf] + GLM v1.9.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [313cdc1a] + Indexing v1.1.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [ff71e718] + MixedModels v4.38.1 [7e9fb7ac] + MixedModelsDatasets v0.1.2 [78c3b35d] + Mocking v0.8.1 [76087f3c] + NLopt v1.2.1 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [431bcebd] + SciMLPublic v1.0.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [03a91e81] + SplitApplyCombine v1.2.3 [5064a6a7] + StandardizedPredictors v1.0.1 [aedffcd0] + Static v1.3.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [3eaba693] + StatsModels v0.7.7 [892a3eda] + StringManipulation v0.4.1 [354b36f9] + StringViews v1.3.5 [856f2bd8] + StructTypes v1.11.0 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [f269a46b] + TimeZones v1.22.1 [3bb67fe8] + TranscodingStreams v0.11.3 [9d95f2ec] + TypedTables v1.4.6 [5ced341a] + Lz4_jll v1.10.1+0 [079eb43e] + NLopt_jll v2.10.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.35s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 281.15s ################################################################################ # Testing # Testing FormulaCompiler Status `/tmp/jl_kQNUaS/Project.toml` [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.15 ⌅ [324d7699] CategoricalArrays v0.10.8 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.122 [72341345] FormulaCompiler v1.1.3 [38e38edf] GLM v1.9.0 ⌅ [ff71e718] MixedModels v4.38.1 [ce6b1742] RDatasets v0.7.7 [5064a6a7] StandardizedPredictors v1.0.1 [10745b16] Statistics v1.11.1 [3eaba693] StatsModels v0.7.7 [bd369af6] Tables v1.12.1 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_kQNUaS/Manifest.toml` [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4c555306] ArrayLayouts v1.12.0 [69666777] Arrow v2.8.0 [31f734f8] ArrowTypes v2.3.0 [093aae92] BSplineKit v0.19.1 [aae01518] BandedMatrices v1.10.1 [6e4b80f9] BenchmarkTools v1.6.3 [c3b6d118] BitIntegers v0.3.5 [fa961155] CEnum 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InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌃ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 ⌅ [ff71e718] MixedModels v4.38.1 [7e9fb7ac] MixedModelsDatasets v0.1.2 [78c3b35d] Mocking v0.8.1 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 ⌅ [df47a6cb] RData v0.8.3 [ce6b1742] RDatasets v0.7.7 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [431bcebd] SciMLPublic v1.0.0 [6c6a2e73] Scratch v1.3.0 [91c51154] 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[29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... NumericCounterfactualVector Basic Functionality: Test Failed at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:42 Expression: access_time < 0.01 Evaluated: 0.015770648 < 0.01 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:680 [inlined] [2] macro expansion @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:42 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [4] macro expansion @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:15 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [6] top-level scope @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:13 CounterfactualVector Performance: Test Failed at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:279 Expression: access_time < 0.01 Evaluated: 0.018941177 < 0.01 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:680 [inlined] [2] macro expansion @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:279 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [4] macro expansion @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:241 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] [6] top-level scope @ ~/.julia/packages/FormulaCompiler/v35DL/test/test_overrides.jl:13 Continuous override benchmark: Memory: 0 bytes Allocations: 0 Min time: 0.04794433198380567 μs Boolean override benchmark: Memory: 0 bytes Allocations: 0 Min time: 0.06416312056737589 μs Categorical override benchmark: Memory: 0 bytes Allocations: 0 Min time: 0.06655771195097038 μs Mixed override benchmark: Memory: 0 bytes Allocations: 0 Min time: 0.06837321063394683 μs ✓ All 6 test rows achieved zero allocation Performance comparison: Normal - Memory: 0 bytes, Allocs: 0 Override - Memory: 0 bytes, Allocs: 0 Normal - Min time: 0.0692620266120778 μs Override - Min time: 0.0706847492323439 μs ✓ Override performance ratio: 1.02x Complex model override benchmark: Memory: 0 bytes Allocations: 0 Min time: 0.11582510729613733 μs ✓ All compressed categorical tests passed WARNING: could not import FormulaCompiler.validate_mixture_weights into Main WARNING: could not import FormulaCompiler.validate_mixture_levels into Main === modelrow() Allocations === Allocations: 0 Memory: 0 bytes Median time: 3190.0 ns === derivative_modelrow!() Allocations (AD backend) === Variables: [:age_h, :dists_p_inv, :are_related_dists_a_inv, :schoolyears_h] Allocations: 0 Memory: 0 bytes Median time: 9000.0 ns NOTE: Uses 53-column NamedTuple; cached columns keep allocations at zero === derivative_modelrow!() Allocations (FD backend) === Variables: [:age_h, :dists_p_inv, :are_related_dists_a_inv, :schoolyears_h] Allocations: 0 Memory: 0 bytes Median time: 25610.0 ns === Batch modelrow() n=100 === Total allocations: 0 Allocations/row: 0.0 === Batch modelrow() n=1000 === Total allocations: 0 Allocations/row: 0.0 === Batch modelrow() n=500000 === Total allocations: 0 Allocations/row: 0.0 === Batch derivative_modelrow!() AD n=100 === Total allocations: 0 Allocations/row: 0.0 (target: 0) === Batch derivative_modelrow!() AD n=1000 === Total allocations: 0 Allocations/row: 0.0 (target: 0) === Batch derivative_modelrow!() AD n=500000 === Total allocations: 0 Allocations/row: 0.0 (target: 0) === Batch derivative_modelrow!() FD n=100 === Total allocations: 0 Allocations/row: 0.0 === Batch derivative_modelrow!() FD n=1000 === Total allocations: 0 Allocations/row: 0.0 === Batch derivative_modelrow!() FD n=500000 === Total allocations: 0 Allocations/row: 0.0 === NamedTuple Size Impact on AD Allocations === Allocations: 0 Memory: 0 bytes Dataset columns: 53 ✓ Negative Binomial models supported and working Linear: Treatment=189.3ns, Binary=159.9ns Logistic: Treatment=194.6ns, Binary=213.2ns Poisson: Treatment=202.4ns, Binary=205.1ns Large dataset (2000 rows): 341.8ns GLM Integration Tests completed successfully! Linear, Logistic, and Poisson models fully supported All link functions working correctly with gradient computation Zero allocations maintained across all GLM families Mathematical consistency validated across model types ✓ Fixed effects extraction and contrast computation validated ✓ Multiple random effects grouping handled correctly Minimizing 135 Time: 0:00:00 ( 0.74 ms/it) objective: 269.87280638995924   Minimizing 290 Time: 0:00:00 ( 1.65 ms/it) ✓ Poisson GLMM successfully tested Large mixed model (1000 obs): Treatment=225.7ns, Condition=269.4ns, Binary=266.7ns MixedModels Integration Tests (Phase 6.2.2) completed successfully! ✓ Linear and Generalized Linear Mixed Models fully supported ✓ Fixed effects extraction and contrast computation validated ✓ Complex random effects structures handled correctly ✓ Zero allocations maintained across all mixed model types ✓ Performance scaling confirmed with large hierarchical datasets ✓ Gradient computation and standard errors working for GLMMs [ Info: Creating 100K observation dataset... [ Info: Dataset created: 100000 rows, 12 columns [ Info: Fitting complex model... [ Info: Testing compilation performance... [ Info: Compilation time: 3.031s [ Info: Testing ContrastEvaluator construction... [ Info: ContrastEvaluator construction time: 0.76s [ Info: Testing evaluation performance... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 43 running 1 of 1 signal (10): User defined signal 1 gc_mark_objarray at /source/src/gc.c:2215 gc_mark_outrefs at /source/src/gc.c:2829 [inlined] gc_mark_loop_serial_ at /source/src/gc.c:2938 gc_mark_loop_serial at /source/src/gc.c:2961 gc_mark_loop at /source/src/gc.c:3143 [inlined] _jl_gc_collect at /source/src/gc.c:3532 ijl_gc_collect at /source/src/gc.c:3895 gc at ./gcutils.jl:133 [inlined] gc at ./gcutils.jl:133 [inlined] gcscrub at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:6 [inlined] #_run#48 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:116 _run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:109 unknown function (ip: 0x768c577642ed) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1057 [inlined] invokelatest at ./essentials.jl:1052 [inlined] #run_result#45 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:48 [inlined] run_result at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:47 [inlined] #run#49 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:143 run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:135 [inlined] run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:135 unknown function (ip: 0x768c3139f566) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 macro expansion at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:462 [inlined] macro expansion at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:82 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] macro expansion at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:12 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] top-level scope at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:9 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./sysimg.jl:38 unknown function (ip: 0x768c57683082) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./sysimg.jl:38 unknown function (ip: 0x768c57683082) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:289 _start at ./client.jl:524 jfptr__start_73678.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x768c58b62249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#733 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7ac8c3ae6c62) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2146 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2086 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1935 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1793 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1902 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7ac8c3adeb2d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1849 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1841 unknown function (ip: 0x7ac8c3ad30b6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2067 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7ac8c3ad2dbd) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7ac8c3ad279d) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7ac8c3acec36) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _include at ./loading.jl:2835 include at ./Base.jl:562 jfptr_include_47022.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 exec_options at ./client.jl:316 _start at ./client.jl:524 jfptr__start_73678.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7ac8c4f7a249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007ac8b81fc010 Total snapshots: 261. Utilization: 0% ╎261 @Base/client.jl:524; _start() ╎ 261 @Base/client.jl:316; exec_options(opts::Base.JLOptions) ╎ 261 @Base/Base.jl:562; include(mod::Module, _path::String) ╎ 261 @Base/loading.jl:2835; _include(mapexpr::Function, mod::Module, _pat… ╎ 261 @Base/loading.jl:2775; include_string(mapexpr::typeof(identity), mo… ╎ 261 @Base/boot.jl:430; eval ╎ ╎ 261 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 261 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 261 @Pkg/src/API.jl:147; test ╎ ╎ 261 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 261 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 261 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec… ╎ ╎ ╎ 261 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 261 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 261 …rc/Operations.jl:2011; test ╎ ╎ ╎ 261 …rc/Operations.jl:2067; test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 261 …c/Operations.jl:1841; kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 261 …c/Operations.jl:1849; #sandbox#115 ╎ ╎ ╎ ╎ 261 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 261 @Base/file.jl:815; mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 261 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 261 …Operations.jl:1902; (::Pkg.Operations.var"#116#12… ╎ ╎ ╎ ╎ ╎ 261 …Operations.jl:1793; with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 261 …Operations.jl:1935; (::Pkg.Operations.var"#118#… ╎ ╎ ╎ ╎ ╎ 261 @Base/env.jl:265; withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 261 …perations.jl:2086; (::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ ╎ 261 …erations.jl:2146; subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 261 …/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 261 …/process.jl:694; wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 261 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 261 …ondition.jl:130; wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 261 …ase/task.jl:1021; wait() 260╎ ╎ ╎ ╎ ╎ ╎ ╎ 261 …ase/task.jl:1012; poptask(W::Base.Intr… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 [43] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:7 gc_try_claim_and_push at /source/src/gc.c:2093 [inlined] gc_mark_objarray at /source/src/gc.c:2246 gc_mark_outrefs at /source/src/gc.c:2677 [inlined] gc_mark_loop_serial_ at /source/src/gc.c:2938 gc_mark_loop_serial at /source/src/gc.c:2961 gc_mark_loop at /source/src/gc.c:3143 [inlined] _jl_gc_collect at /source/src/gc.c:3532 ijl_gc_collect at /source/src/gc.c:3895 gc at ./gcutils.jl:133 [inlined] gc at ./gcutils.jl:133 [inlined] gcscrub at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:5 [inlined] #_run#48 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:116 _run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:109 unknown function (ip: 0x768c577642ed) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1057 [inlined] invokelatest at ./essentials.jl:1052 [inlined] #run_result#45 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:48 [inlined] run_result at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:47 [inlined] #run#49 at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:143 run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:135 [inlined] run at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:135 unknown function (ip: 0x768c3139f566) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 macro expansion at /home/pkgeval/.julia/packages/BenchmarkTools/2di2E/src/execution.jl:462 [inlined] macro expansion at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:82 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] macro expansion at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:12 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1709 [inlined] top-level scope at /home/pkgeval/.julia/packages/FormulaCompiler/v35DL/test/test_large_dataset_performance.jl:9 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_invoke at /source/src/gf.c:2958 jl_toplevel_eval_flex at /source/src/toplevel.c:934 #wait#733 at ./condition.jl:130 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 profile_printing_listener at ./Base.jl:582 _include at ./loading.jl:2835 include at ./sysimg.jl:38 unknown function (ip: 0x768c57683082) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 #1192 at ./Base.jl:622 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 jfptr_YY.1192_76252.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 21573005 (Pool: 21572236; Big: 769); GC: 22 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2775 _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") _include at ./loading.jl:2835 include at ./sysimg.jl:38 unknown function (ip: 0x768c57683082) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 error at ./error.jl:35 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 #schedule#763 at ./task.jl:884 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:289 _start at ./client.jl:524 jfptr_uv_writecb_task_67129.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jfptr__start_73678.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x768c58b62249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) Allocations: 388026963 (Pool: 388013481; Big: 13482); GC: 972 jlcapi_uv_writecb_task_67593.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48479.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 showerror at ./errorshow.jl:152 unknown function (ip: 0x7ac8c3af3da6) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 _atexit at ./initdefs.jl:454 jfptr__atexit_69637.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2951 [inlined] ijl_apply_generic at /source/src/gf.c:3128 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2724.37s: test duration exceeded the time limit