Package evaluation to test ClimateTools on Julia 1.11.7 (58327cce5e*) started at 2025-10-29T07:10:59.548 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.89s ################################################################################ # Installation # Installing ClimateTools... Resolving package versions... Installed NCDatasets ─── v0.10.4 Installed Conda ──────── v1.10.3 Installed NetCDF ─────── v0.10.3 Installed PyCall ─────── v1.96.4 Installed HDF5 ───────── v0.16.16 Installed ClimateTools ─ v0.24.1 Updating `~/.julia/environments/v1.11/Project.toml` [4f4ee721] + ClimateTools v0.24.1 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.18.0 [621f4979] + AbstractFFTs v1.5.0 [22286c92] + AccurateArithmetic v0.3.8 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [39de3d68] + AxisArrays v0.4.8 [9e28174c] + BinDeps v1.0.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 ⌅ [179af706] + CFTime v0.1.4 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 ⌅ [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.26.0 [4f4ee721] + ClimateTools v0.24.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a81c6b42] + Compose v0.9.6 [8f4d0f93] + Conda v1.10.3 [a9693cdc] + CondaBinDeps v0.2.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [7ad07ef1] + CoupledFields v0.3.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [75c7ada1] + DBFTables v1.2.7 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.9 ⌅ [3c3547ce] + DiskArrays v0.2.13 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 [411431e0] + Extents v0.1.6 ⌅ [fe3fe864] + Extremes v0.3.0 [7a1cc6ca] + FFTW v1.10.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.14.0 [6a86dc24] + FiniteDiff v2.29.0 [53c48c17] + FixedPointNumbers v0.8.5 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.39 [c91e804a] + Gadfly v1.4.1 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.6.0 [0329782f] + GeoInterfaceRecipes v1.0.2 [86223c79] + Graphs v1.13.1 [42e2da0e] + Grisu v1.0.2 ⌅ [f67ccb44] + HDF5 v0.16.16 [a1b4810d] + Hexagons v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 ⌅ [a98d9a8b] + Interpolations v0.14.0 [8197267c] + IntervalSets v0.7.11 [d8418881] + Intervals v1.10.0 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [8e2b3108] + KahanSummation v0.3.1 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 ⌅ [7031d0ef] + LazyGrids v0.5.0 [d3d80556] + LineSearches v7.4.0 [4345ca2d] + Loess v0.6.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.173 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [ee262687] + MambaLite v0.1.3 [d125e4d3] + ManualMemory v0.1.8 [442fdcdd] + Measures v0.3.2 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 ⌅ [85f8d34a] + NCDatasets v0.10.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 ⌅ [30363a11] + NetCDF v0.10.3 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [f27b6e38] + Polynomials v1.2.1 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 ⌅ [b0e4dd01] + RollingFunctions v0.7.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 ⌅ [8e980c4a] + Shapefile v0.10.0 [992d4aef] + Showoff v1.0.3 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.1 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [f269a46b] + TimeZones v1.22.1 [3bb67fe8] + TranscodingStreams v0.11.3 [30578b45] + URIParser v0.4.1 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.72 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [76eceee3] + WorkerUtilities v1.6.1 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ───────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building NetCDF ──────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/dda7b49694d15d7d1a1ba1d7c2a9142777028bd5/build.log` Building PyCall ──────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building NCDatasets ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/31ce6711bc8fa173d97c59066e78caa2846ed200/build.log` Building HDF5 ────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log` Building ClimateTools → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/216f2d00acfd5b5775f42f87afc4937408830abd/build.log` Installation completed after 359.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 381.1s ################################################################################ # Testing # Testing ClimateTools Status `/tmp/jl_W3KUD1/Project.toml` [dce04be8] ArgCheck v2.5.0 [39de3d68] AxisArrays v0.4.8 [4f4ee721] ClimateTools v0.24.1 [a93c6f00] DataFrames v1.8.1 [b4f34e82] Distances v0.10.12 ⌅ [fe3fe864] Extremes v0.3.0 ⌅ [f67ccb44] HDF5 v0.16.16 ⌅ [a98d9a8b] Interpolations v0.14.0 [c8e1da08] IterTools v1.10.0 ⌅ [85f8d34a] NCDatasets v0.10.4 [77ba4419] NaNMath v1.1.3 ⌅ [30363a11] NetCDF v0.10.3 ⌅ [f27b6e38] Polynomials v1.2.1 [92933f4c] ProgressMeter v1.11.0 [438e738f] PyCall v1.96.4 [189a3867] Reexport v1.2.2 ⌅ [b0e4dd01] RollingFunctions v0.7.0 ⌅ [8e980c4a] Shapefile v0.10.0 [10745b16] Statistics v1.11.1 [ade2ca70] Dates v1.11.0 [44cfe95a] Pkg v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_W3KUD1/Manifest.toml` [47edcb42] ADTypes v1.18.0 [621f4979] AbstractFFTs v1.5.0 [22286c92] AccurateArithmetic v0.3.8 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 ⌃ [13072b0f] AxisAlgorithms v1.0.1 [39de3d68] AxisArrays v0.4.8 [9e28174c] BinDeps v1.0.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 ⌅ [179af706] CFTime v0.1.4 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 ⌅ [324d7699] CategoricalArrays v0.10.8 [d360d2e6] ChainRulesCore v1.26.0 [4f4ee721] ClimateTools v0.24.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a81c6b42] Compose v0.9.6 [8f4d0f93] Conda v1.10.3 [a9693cdc] CondaBinDeps v0.2.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [7ad07ef1] CoupledFields v0.3.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [75c7ada1] DBFTables v1.2.7 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.9 ⌅ [3c3547ce] DiskArrays v0.2.13 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [e2ba6199] ExprTools v0.1.10 [411431e0] Extents v0.1.6 ⌅ [fe3fe864] Extremes v0.3.0 [7a1cc6ca] FFTW v1.10.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.14.0 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [59287772] Formatting v0.4.3 ⌅ [f6369f11] ForwardDiff v0.10.39 [c91e804a] Gadfly v1.4.1 [68eda718] GeoFormatTypes v0.4.4 [cf35fbd7] GeoInterface v1.6.0 [0329782f] GeoInterfaceRecipes v1.0.2 [86223c79] Graphs v1.13.1 [42e2da0e] Grisu v1.0.2 ⌅ [f67ccb44] HDF5 v0.16.16 [a1b4810d] Hexagons v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 ⌅ [a98d9a8b] Interpolations v0.14.0 [8197267c] IntervalSets v0.7.11 [d8418881] Intervals v1.10.0 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [8e2b3108] KahanSummation v0.3.1 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 ⌅ [7031d0ef] LazyGrids v0.5.0 [d3d80556] LineSearches v7.4.0 [4345ca2d] Loess v0.6.4 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.173 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [ee262687] MambaLite v0.1.3 [d125e4d3] ManualMemory v0.1.8 [442fdcdd] Measures v0.3.2 [e1d29d7a] Missings v1.2.0 [78c3b35d] Mocking v0.8.1 ⌅ [85f8d34a] NCDatasets v0.10.4 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 ⌅ [30363a11] NetCDF v0.10.3 [6fe1bfb0] OffsetArrays v1.17.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [1d0040c9] PolyesterWeave v0.2.2 ⌅ [f27b6e38] Polynomials v1.2.1 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [1fd47b50] QuadGK v2.11.2 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 ⌅ [b0e4dd01] RollingFunctions v0.7.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 ⌅ [8e980c4a] Shapefile v0.10.0 [992d4aef] Showoff v1.0.3 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.1 [dc5dba14] TZJData v1.5.0+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [f269a46b] TimeZones v1.22.1 [3bb67fe8] TranscodingStreams v0.11.3 [30578b45] URIParser v0.4.1 [3a884ed6] UnPack v1.0.2 [3d5dd08c] VectorizationBase v0.21.72 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 ⌅ [efce3f68] WoodburyMatrices v0.5.6 [76eceee3] WorkerUtilities v1.6.1 [f5851436] FFTW_jll v3.3.11+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling ClimateTools... 1404.7 ms ? GeoInterfaceRecipes 1465.3 ms ? Shapefile Info Given ClimateTools was explicitly requested, output will be shown live  WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 2355.7 ms ? ClimateTools WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling Shapefile... 954.5 ms ? GeoInterfaceRecipes Info Given Shapefile was explicitly requested, output will be shown live  WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 2004.6 ms ? Shapefile WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling GeoInterfaceRecipes... Info Given GeoInterfaceRecipes was explicitly requested, output will be shown live  WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 1245.9 ms ? GeoInterfaceRecipes WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiPointTrait, GeoInterface.PointTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.MultiLineStringTrait, GeoInterface.AbstractLineStringTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, Union{GeoInterface.LinearRingTrait, GeoInterface.MultiPolygonTrait, GeoInterface.PolygonTrait}, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, GeoInterface.GeometryCollectionTrait, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, GeoInterface.FeatureTrait, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, GeoInterface.FeatureCollectionTrait, Any) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/RecipesBase/BRe07/src/RecipesBase.jl:296 overwritten in module GeoInterfaceRecipes on the same line (check for duplicate calls to `include`). WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, GeoInterface.Wrappers.WrapperGeometry{Z, M, T, C} where C where T where M where Z) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/GeoInterface/X1jn3/src/plotting.jl:119 overwritten in module GeoInterfaceRecipes at /home/pkgeval/.julia/packages/GeoInterfaceRecipes/eFtGW/src/GeoInterfaceRecipes.jl:137. WARNING: Method definition apply_recipe(Base.AbstractDict{Symbol, Any}, AbstractArray{var"#s4", 1} where var"#s4"<:(Union{Base.Missing, var"#s1"} where var"#s1"<:(GeoInterface.Wrappers.WrapperGeometry{Z, M, T, C} where C where T where M where Z))) in module GeoInterfaceRecipesBaseExt at /home/pkgeval/.julia/packages/GeoInterface/X1jn3/src/plotting.jl:122 overwritten in module GeoInterfaceRecipes at /home/pkgeval/.julia/packages/GeoInterfaceRecipes/eFtGW/src/GeoInterfaceRecipes.jl:144. Precompiling DBFTables... 1913.3 ms ✓ DBFTables 1 dependency successfully precompiled in 2 seconds. 17 already precompiled. Precompiling DataFrames... 88474.0 ms ✓ DataFrames 1 dependency successfully precompiled in 90 seconds. 34 already precompiled. Precompiling Interpolations... Info Given Interpolations was explicitly requested, output will be shown live  WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:454 declares type variable N but does not use it. WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:457 declares type variable N but does not use it. WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:37 declares type variable pad but does not use it. WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:60 declares type variable pad but does not use it. WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/deprecations.jl:30 declares type variable TWeights but does not use it. 4067.6 ms ✓ Interpolations 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. 1 dependency had output during precompilation: ┌ Interpolations │ [Output was shown above] └ Precompiling Polynomials... 2821.4 ms ✓ TimeZones → TimeZonesRecipesBaseExt 8370.4 ms ✓ Intervals Info Given Polynomials was explicitly requested, output will be shown live  WARNING: method definition for showterm at /home/pkgeval/.julia/packages/Polynomials/1aa8e/src/polynomials/ChebyshevT.jl:224 declares type variable N but does not use it. 4246.9 ms ✓ Polynomials 3 dependencies successfully precompiled in 16 seconds. 29 already precompiled. 1 dependency had output during precompilation: ┌ Polynomials │ [Output was shown above] └ Precompiling Extremes... 7519.8 ms ✓ Compose 27483.6 ms ✓ CSV 9131.4 ms ✓ Graphs 1345.4 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 2398.7 ms ✓ CoupledFields 9494.4 ms ✓ Distributions 5237.8 ms ✓ LineSearches 4159.7 ms ✓ MambaLite 5653.7 ms ✓ Distributions → DistributionsTestExt 5812.5 ms ✓ Distributions → DistributionsChainRulesCoreExt 12371.2 ms ✓ Optim 30960.6 ms ✓ KernelDensity 27426.3 ms ✓ Gadfly 79991.2 ms ✓ Extremes 14 dependencies successfully precompiled in 240 seconds. 177 already precompiled. Precompiling CategoricalArraysRecipesBaseExt... 2086.1 ms ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt 1 dependency successfully precompiled in 2 seconds. 14 already precompiled. Precompiling RollingFunctions... 2680.3 ms ✓ StaticArrayInterface 1077.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1016.8 ms ✓ CloseOpenIntervals 1173.4 ms ✓ LayoutPointers 12365.9 ms ✓ VectorizationBase 1882.0 ms ✓ AccurateArithmetic 2267.3 ms ✓ SLEEFPirates 45501.9 ms ✓ LoopVectorization 13331.8 ms ✓ RollingFunctions 9 dependencies successfully precompiled in 82 seconds. 50 already precompiled. Precompiling StaticArrayInterfaceStaticArraysExt... 1782.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 21 already precompiled. Precompiling SpecialFunctionsExt... 2864.2 ms ✓ LoopVectorization → SpecialFunctionsExt 1 dependency successfully precompiled in 4 seconds. 44 already precompiled. Precompiling ForwardDiffExt... 3813.7 ms ✓ LoopVectorization → ForwardDiffExt 1 dependency successfully precompiled in 5 seconds. 57 already precompiled. [ Info: Installing scipy.interpolate via the Conda scipy package... [ Info: Running `conda install -q -y scipy` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - scipy The following packages will be downloaded: package | build ---------------------------|----------------- scipy-1.16.3 | py312h7a1785b_0 16.3 MB conda-forge ------------------------------------------------------------ Total: 16.3 MB The following NEW packages will be INSTALLED: scipy conda-forge/linux-64::scipy-1.16.3-py312h7a1785b_0 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done ERROR: LoadError: InitError: PyError (PyImport_ImportModule The Python package scipy.interpolate could not be imported by pyimport. Usually this means that you did not install scipy.interpolate in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.interpolate module, you can use `pyimport_conda("scipy.interpolate", PKG)`, where PKG is the Anaconda package that contains the module scipy.interpolate, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ImportError("/opt/julia/bin/../lib/julia/libstdc++.so.6: version `CXXABI_1.3.15' not found (required by /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/optimize/_highspy/_core.cpython-312-x86_64-linux-gnu.so)") File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/interpolate/__init__.py", line 192, in from ._interpolate import * File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/interpolate/_interpolate.py", line 12, in from . import _fitpack_py File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/interpolate/_fitpack_py.py", line 10, in from ._bsplines import BSpline File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/interpolate/_bsplines.py", line 9, in from scipy.optimize import minimize_scalar File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/optimize/__init__.py", line 435, in from ._linprog import linprog, linprog_verbose_callback File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/optimize/_linprog.py", line 21, in from ._linprog_highs import _linprog_highs File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/optimize/_linprog_highs.py", line 20, in from ._highspy._highs_wrapper import _highs_wrapper File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/scipy/optimize/_highspy/_highs_wrapper.py", line 4, in import scipy.optimize._highspy._core as _h # type: ignore[import-not-found] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:722 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ ClimateTools ~/.julia/packages/ClimateTools/cUGFX/src/ClimateTools.jl:48 [5] include(mod::Module, _path::String) @ Base ./Base.jl:562 [6] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2618 [7] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [8] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [9] invoke_in_world @ ./essentials.jl:1086 [inlined] [10] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [11] macro expansion @ ./loading.jl:2314 [inlined] [12] macro expansion @ ./lock.jl:273 [inlined] [13] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [14] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [15] invoke_in_world @ ./essentials.jl:1086 [inlined] [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [17] include(fname::String) @ Main ./sysimg.jl:38 [18] top-level scope @ none:6 during initialization of module ClimateTools in expression starting at /home/pkgeval/.julia/packages/ClimateTools/cUGFX/src/ClimateTools.jl:1 in expression starting at /home/pkgeval/.julia/packages/ClimateTools/cUGFX/test/runtests.jl:1 caused by: PyError (PyImport_ImportModule The Python package scipy.interpolate could not be imported by pyimport. Usually this means that you did not install scipy.interpolate in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the scipy.interpolate module, you can use `pyimport_conda("scipy.interpolate", PKG)`, where PKG is the Anaconda package that contains the module scipy.interpolate, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ModuleNotFoundError("No module named 'scipy'") Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyimport_conda(modulename::String, condapkg::String, channel::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:716 [3] pyimport_conda @ ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:715 [inlined] [4] __init__() @ ClimateTools ~/.julia/packages/ClimateTools/cUGFX/src/ClimateTools.jl:48 [5] include(mod::Module, _path::String) @ Base ./Base.jl:562 [6] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2618 [7] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [8] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [9] invoke_in_world @ ./essentials.jl:1086 [inlined] [10] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [11] macro expansion @ ./loading.jl:2314 [inlined] [12] macro expansion @ ./lock.jl:273 [inlined] [13] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [14] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [15] invoke_in_world @ ./essentials.jl:1086 [inlined] [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [17] include(fname::String) @ Main ./sysimg.jl:38 [18] top-level scope @ none:6 Testing failed after 552.82s ERROR: LoadError: Package ClimateTools errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2128 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2011 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1387.52s: illegal method overwrites during precompilation