Package evaluation to load ABBAj on Julia 1.13.0-DEV.1276 (4ca97dc26d*) started at 2025-10-10T06:40:40.945 ################################################################################ # Set-up # Set-up completed after 0.11s ################################################################################ # Installation # Installing ABBAj... Resolving package versions... Installed Rmath_jll ─────────────── v0.5.1+0 Installed AliasTables ───────────── v1.1.3 Installed DelimitedFiles ────────── v1.9.1 Installed FillArrays ────────────── v1.14.0 Installed OrderedCollections ────── v1.8.1 Installed HypergeometricFunctions ─ v0.3.28 Installed DataStructures ────────── v0.19.1 Installed StatsBase ─────────────── v0.34.6 Installed DataAPI ───────────────── v1.16.0 Installed StatsAPI ──────────────── v1.7.1 Installed IrrationalConstants ───── v0.2.4 Installed Statistics ────────────── v1.11.1 Installed Distances ─────────────── v0.10.12 Installed UnsafeArrays ──────────── v1.0.8 Installed QuadGK ────────────────── v2.11.2 Installed OpenSpecFun_jll ───────── v0.5.6+0 Installed Rmath ─────────────────── v0.8.0 Installed PtrArrays ─────────────── v1.3.0 Installed LogExpFunctions ───────── v0.3.29 Installed StatsFuns ─────────────── v1.5.0 Installed SpecialFunctions ──────── v2.6.1 Installed Reexport ──────────────── v1.2.2 Installed Missings ──────────────── v1.2.0 Installed ScientificTypesBase ───── v3.0.0 Installed JLLWrappers ───────────── v1.7.1 Installed Preferences ───────────── v1.5.0 Installed Distributions ─────────── v0.25.122 Installed SortingAlgorithms ─────── v1.2.2 Installed ABBAj ─────────────────── v0.1.1 Installed DocStringExtensions ───── v0.9.5 Installed PDMats ────────────────── v0.11.35 Installed StatisticalTraits ─────── v3.5.0 Installed MLJModelInterface ─────── v1.12.0 Installed ParallelKMeans ────────── v1.1.0 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [6b41afa3] + ABBAj v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [6b41afa3] + ABBAj v0.1.1 [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.14.0 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e80e1ace] + MLJModelInterface v1.12.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [42b8e9d4] + ParallelKMeans v1.1.0 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.8.0 [30f210dd] + ScientificTypesBase v3.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [c4a57d5a] + UnsafeArrays v1.0.8 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 11.78s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 648.2 ms ✓ Reexport 766.2 ms ✓ Statistics 611.0 ms ✓ DataAPI 1407.8 ms ✓ IrrationalConstants 586.9 ms ✓ StatsAPI 901.9 ms ✓ OrderedCollections 834.6 ms ✓ DocStringExtensions 800.9 ms ✓ UnsafeArrays 1873.8 ms ✓ FillArrays 818.3 ms ✓ PtrArrays 825.6 ms ✓ ScientificTypesBase 1122.6 ms ✓ SuiteSparse 896.2 ms ✓ DelimitedFiles 1128.3 ms ✓ Preferences 1519.0 ms ✓ Statistics → SparseArraysExt 1081.9 ms ✓ Missings 1600.2 ms ✓ Distances 2827.1 ms ✓ DataStructures 1355.8 ms ✓ LogExpFunctions 1187.9 ms ✓ FillArrays → FillArraysSparseArraysExt 924.7 ms ✓ FillArrays → FillArraysStatisticsExt 1001.1 ms ✓ AliasTables 773.2 ms ✓ StatisticalTraits 1651.8 ms ✓ PDMats 1138.1 ms ✓ JLLWrappers 1163.6 ms ✓ Distances → DistancesSparseArraysExt 987.4 ms ✓ SortingAlgorithms 1947.3 ms ✓ QuadGK 2144.8 ms ✓ MLJModelInterface 1320.5 ms ✓ FillArrays → FillArraysPDMatsExt 1408.6 ms ✓ Rmath_jll 1450.3 ms ✓ OpenSpecFun_jll 4045.3 ms ✓ StatsBase 1329.7 ms ✓ Rmath 3884.2 ms ✓ SpecialFunctions 3266.0 ms ✓ ParallelKMeans 1512.9 ms ✓ HypergeometricFunctions 1936.1 ms ✓ StatsFuns 6458.5 ms ✓ Distributions 2852.2 ms ✓ Distributions → DistributionsTestExt Precompilation completed after 70.26s ################################################################################ # Loading # Loading ABBAj... ERROR: LoadError: Could not find something to document in `(ABBA_PARAM_MU, ABBA_PARAM_SCL)`. Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] splitexpr(x::Expr) @ Base.Docs ./docs/bindings.jl:21 [3] bindingexpr(x::Any) @ Base.Docs ./docs/bindings.jl:15 [4] objectdoc(__source__::Any, __module__::Any, str::Any, def::Any, expr::Any, sig::Any) @ Base.Docs ./docs/Docs.jl:397 [5] _docm(source::LineNumberNode, mod::Module, meta::Any, x::Any, define::Bool) @ Base.Docs ./docs/Docs.jl:708 [6] docm @ ./docs/Docs.jl:667 [inlined] [7] docm(source::LineNumberNode, mod::Module, meta::Any, ex::Any) @ Base.Docs ./docs/Docs.jl:666 [8] (::DocStringExtensions.var"#hook!##0#hook!##1"{typeof(DocStringExtensions.template_hook)})(::LineNumberNode, ::Vararg{Any}) @ DocStringExtensions ~/.julia/packages/DocStringExtensions/zNis6/src/templates.jl:11 [9] var"@doc"(__source__::LineNumberNode, __module__::Module, x::Vararg{Any}) @ Core ./boot.jl:766 [10] fl_lower(ex::Expr, mod::Module, filename::String, lineno::UInt64, world::UInt64, warn::Bool) @ Base ./flfrontend.jl:24 [11] include(mod::Module, _path::String) @ Base ./Base.jl:309 [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [14] macro expansion @ ./loading.jl:2464 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [17] require @ ./loading.jl:2404 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ none:1 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [24] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/ABBAj/YDmTu/src/ABBAj.jl:11 in expression starting at /home/pkgeval/.julia/packages/ABBAj/YDmTu/src/ABBAj.jl:1 Loading failed after 9.0s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using ABBAj'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 188.4s: there were unidentified errors