Package evaluation to test ZarrDatasets on Julia 1.12.4 (422f456051*) started at 2026-01-29T09:56:49.551 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 7.84s ################################################################################ # Installation # Installing ZarrDatasets... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [519a4cdf] + ZarrDatasets v0.1.4 Updating `~/.julia/environments/v1.12/Manifest.toml` [fbe9abb3] + AWS v1.97.1 [1c724243] + AWSS3 v0.11.4 [dce04be8] + ArgCheck v2.5.0 [31f734f8] + ArrowTypes v2.3.0 [d1d4a3ce] + BitFlags v0.1.9 [a74b3585] + Blosc v0.7.3 [179af706] + CFTime v0.2.5 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [1fbeeb36] + CommonDataModel v0.4.2 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [864edb3b] + DataStructures v0.19.3 [b342263e] + DateTimes64 v1.0.1 [3c3547ce] + DiskArrays v0.4.19 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [8f5d6c58] + EzXML v1.2.3 [48062228] + FilePathsBase v0.9.24 [bc5e4493] + GitHub v5.12.0 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [83e8ac13] + IniFile v0.5.1 [0c81fc1b] + InputBuffers v1.1.1 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [8ac3fa9e] + LRUCache v1.6.2 [e6f89c97] + LoggingExtras v1.2.0 [739be429] + MbedTLS v1.1.9 [78c3b35d] + Mocking v0.8.1 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [20febd7b] + Retry v0.4.1 [7e506255] + ScopedValues v1.5.0 [777ac1f9] + SimpleBufferStream v1.2.0 [2133526b] + SodiumSeal v0.1.1 [10745b16] + Statistics v1.11.1 [2da68c74] + SymDict v0.3.0 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [228000da] + XMLDict v0.4.1 [0a941bbe] + Zarr v0.9.6 [519a4cdf] + ZarrDatasets v0.1.4 [49080126] + ZipArchives v2.6.0 [0b7ba130] + Blosc_jll v1.21.7+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [02c8fc9c] + XML2_jll v2.15.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [a9144af2] + libsodium_jll v1.0.21+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.9s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 61414.4 ms ✓ ZarrDatasets 1 dependency successfully precompiled in 63 seconds. 110 already precompiled. Precompilation completed after 84.06s ################################################################################ # Testing # Testing ZarrDatasets Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_g80U6e/Project.toml` [4c88cf16] + Aqua v0.8.14 [85f8d34a] + NCDatasets v0.14.10 [519a4cdf] + ZarrDatasets v0.1.4 Updating `/tmp/jl_g80U6e/Manifest.toml` [4c88cf16] + Aqua v0.8.14 [3da0fdf6] + MPIPreferences v0.1.11 [85f8d34a] + NCDatasets v0.14.10 [519a4cdf] + ZarrDatasets v0.1.4 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] ↓ XML2_jll v2.15.1+0 ⇒ v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.2+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.5+0 [337d8026] + libzip_jll v1.11.3+0 [4af54fe1] + LazyArtifacts v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_g80U6e/Project.toml` [4c88cf16] Aqua v0.8.14 [1fbeeb36] CommonDataModel v0.4.2 [3c3547ce] DiskArrays v0.4.19 [85f8d34a] NCDatasets v0.14.10 [0a941bbe] Zarr v0.9.6 [519a4cdf] ZarrDatasets v0.1.4 [ade2ca70] Dates v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_g80U6e/Manifest.toml` [fbe9abb3] AWS v1.97.1 [1c724243] AWSS3 v0.11.4 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [31f734f8] ArrowTypes v2.3.0 [d1d4a3ce] BitFlags v0.1.9 [a74b3585] Blosc v0.7.3 [179af706] CFTime v0.2.5 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [1fbeeb36] CommonDataModel v0.4.2 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [864edb3b] DataStructures v0.19.3 [b342263e] DateTimes64 v1.0.1 [3c3547ce] DiskArrays v0.4.19 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [8f5d6c58] EzXML v1.2.3 [48062228] FilePathsBase v0.9.24 [bc5e4493] GitHub v5.12.0 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [83e8ac13] IniFile v0.5.1 [0c81fc1b] InputBuffers v1.1.1 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [8ac3fa9e] LRUCache v1.6.2 [e6f89c97] LoggingExtras v1.2.0 [3da0fdf6] MPIPreferences v0.1.11 [739be429] MbedTLS v1.1.9 [78c3b35d] Mocking v0.8.1 [85f8d34a] NCDatasets v0.14.10 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [20febd7b] Retry v0.4.1 [7e506255] ScopedValues v1.5.0 [777ac1f9] SimpleBufferStream v1.2.0 [2133526b] SodiumSeal v0.1.1 [10745b16] Statistics v1.11.1 [2da68c74] SymDict v0.3.0 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [228000da] XMLDict v0.4.1 [0a941bbe] Zarr v0.9.6 [519a4cdf] ZarrDatasets v0.1.4 [49080126] ZipArchives v2.6.0 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.900.300+0 [fe0851c0] OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.2+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.5+0 [a9144af2] libsodium_jll v1.0.21+0 [337d8026] libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 21035.9 ms ✓ NCDatasets 1 dependency successfully precompiled in 22 seconds. 58 already precompiled. Dataset: Group: root Dimensions lon = 3 lat = 5 Variables var2 (3 × 5) Datatype: Int32 (Int32) Dimensions: lon × lat Attributes: units = m/s number = 12 long_name = test Global attributes history = test Groups Dataset: Group: sub-group Variables data2 (3 × 5) Datatype: Int8 (Int8) Dimensions: lon × lat Attributes: standard_name = test data3 (4) Datatype: Int16 (Int16) Dimensions: time Global attributes int_attrib = 42 ┌ Warning: Assignment to `zv` in soft scope is ambiguous because a global variable by the same name exists: `zv` will be treated as a new local. Disambiguate by using `local zv` to suppress this warning or `global zv` to assign to the existing global variable. └ @ ~/.julia/packages/ZarrDatasets/KooVn/test/test_preexisting.jl:32 ┌ Warning: Assignment to `io` in soft scope is ambiguous because a global variable by the same name exists: `io` will be treated as a new local. Disambiguate by using `local io` to suppress this warning or `global io` to assign to the existing global variable. └ @ ~/.julia/packages/ZarrDatasets/KooVn/test/test_preexisting.jl:40 ┌ Warning: Assignment to `str` in soft scope is ambiguous because a global variable by the same name exists: `str` will be treated as a new local. Disambiguate by using `local str` to suppress this warning or `global str` to assign to the existing global variable. └ @ ~/.julia/packages/ZarrDatasets/KooVn/test/test_preexisting.jl:42 Persistent tasks: Test Failed at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:38 Expression: !(has_persistent_tasks(package; kwargs...)) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:680 [inlined] [2] test_persistent_tasks(package::Base.PkgId; broken::Bool, kwargs::@Kwargs{}) @ Aqua ~/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:38 [3] test_persistent_tasks @ ~/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:34 [inlined] [4] #test_persistent_tasks#57 @ ~/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:43 [inlined] [5] test_persistent_tasks @ ~/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:42 [inlined] [6] macro expansion @ ~/.julia/packages/Aqua/MCcFg/src/Aqua.jl:109 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [8] test_all(testtarget::Module; ambiguities::Bool, unbound_args::Bool, undefined_exports::Bool, project_extras::Bool, stale_deps::Bool, deps_compat::Bool, piracies::Bool, persistent_tasks::Bool, undocumented_names::Bool) @ Aqua ~/.julia/packages/Aqua/MCcFg/src/Aqua.jl:109 Test Summary: | Pass Fail Total Time ZarrDatasets.jl | 74 1 75 5m00.8s Unbound type parameters | 1 1 0.1s Undefined exports | 1 1 0.0s Compare Project.toml and test/Project.toml | 1 1 0.4s Stale dependencies | 1 1 8.8s Compat bounds | 4 4 0.7s Piracy | 1 1 0.2s Persistent tasks | 1 1 1m16.2s RNG of the outermost testset: Random.Xoshiro(0x30818a2d01174c4b, 0x1f7f6b53225768a3, 0x4a0f744fc804c7d4, 0xd5eb354933942cce, 0xdabb86b5b942a6fa) ERROR: LoadError: Some tests did not pass: 74 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ZarrDatasets/KooVn/test/runtests.jl:4 Testing failed after 312.61s ERROR: LoadError: Package ZarrDatasets errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 444.52s: package has test failures