Package evaluation to test StructuralIdentifiability on Julia 1.12.4 (422f456051*) started at 2026-01-29T03:49:06.320 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.17s ################################################################################ # Installation # Installing StructuralIdentifiability... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [220ca800] + StructuralIdentifiability v0.5.18 Updating `~/.julia/environments/v1.12/Manifest.toml` ⌅ [c3fe647b] + AbstractAlgebra v0.47.6 [a9b6321e] + Atomix v1.1.2 [861a8166] + Combinatorics v1.1.0 [864edb3b] + DataStructures v0.19.3 [e2ba6199] + ExprTools v0.1.10 [0b43b601] + Groebner v0.10.2 [18e54dd8] + IntegerMathUtils v0.1.3 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [2edaba10] + Nemo v0.52.4 [bac558e1] + OrderedCollections v1.8.1 [3e851597] + ParamPunPam v0.5.7 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [fb686558] + RandomExtensions v0.4.4 ⌅ [73480bc8] + RationalFunctionFields v0.2.3 [220ca800] + StructuralIdentifiability v0.5.18 [a759f4b9] + TimerOutputs v0.5.29 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e134572f] + FLINT_jll v301.300.102+0 [656ef2d0] + OpenBLAS32_jll v0.3.30+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.78s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 201560.1 ms ✓ RationalFunctionFields 249844.2 ms ✓ StructuralIdentifiability 2 dependencies successfully precompiled in 461 seconds. 74 already precompiled. Precompilation completed after 468.21s ################################################################################ # Testing # Testing StructuralIdentifiability Status `/tmp/jl_NijACx/Project.toml` ⌅ [c3fe647b] AbstractAlgebra v0.47.6 [4c88cf16] Aqua v0.8.14 [2a0fbf3d] CPUSummary v0.2.7 [861a8166] Combinatorics v1.1.0 [864edb3b] DataStructures v0.19.3 [0b43b601] Groebner v0.10.2 [c8e1da08] IterTools v1.10.0 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.52.4 [3e851597] ParamPunPam v0.5.7 [aea7be01] PrecompileTools v1.3.3 [27ebfcd6] Primes v0.5.7 ⌅ [73480bc8] RationalFunctionFields v0.2.3 [276daf66] SpecialFunctions v2.6.1 [220ca800] StructuralIdentifiability v0.5.18 [98d24dd4] TestSetExtensions v3.0.0 [a759f4b9] TimerOutputs v0.5.29 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.12.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_NijACx/Manifest.toml` ⌅ [c3fe647b] AbstractAlgebra v0.47.6 [4c88cf16] Aqua v0.8.14 [a9b6321e] Atomix v1.1.2 [2a0fbf3d] CPUSummary v0.2.7 [861a8166] Combinatorics v1.1.0 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [adafc99b] CpuId v0.3.1 [864edb3b] DataStructures v0.19.3 [ab62b9b5] DeepDiffs v1.2.0 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [0b43b601] Groebner v0.10.2 [615f187c] IfElse v0.1.1 [18e54dd8] IntegerMathUtils v0.1.3 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.52.4 [bac558e1] OrderedCollections v1.8.1 [3e851597] ParamPunPam v0.5.7 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [fb686558] RandomExtensions v0.4.4 ⌅ [73480bc8] RationalFunctionFields v0.2.3 [431bcebd] SciMLPublic v1.0.1 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [220ca800] StructuralIdentifiability v0.5.18 [98d24dd4] TestSetExtensions v3.0.0 [a759f4b9] TimerOutputs v0.5.29 [013be700] UnsafeAtomics v0.3.0 ⌅ [e134572f] FLINT_jll v301.300.102+0 [656ef2d0] OpenBLAS32_jll v0.3.30+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.2+0 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 8569.6 ms ✓ AbstractAlgebra → TestExt 1 dependency successfully precompiled in 9 seconds. 18 already precompiled. Resolving package versions... Updating `/tmp/jl_NijACx/Project.toml` ⌅ [861a8166] ↓ Combinatorics v1.1.0 ⇒ v1.0.2 [loaded: v1.1.0] [961ee093] + ModelingToolkit v11.8.0 Updating `/tmp/jl_NijACx/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [6e696c72] + AbstractPlutoDingetjes v1.3.2 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 [e2ed5e7c] + Bijections v0.2.2 [caf10ac8] + BipartiteGraphs v0.1.6 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.9.3 [70df07ce] + BracketingNonlinearSolve v1.6.2 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 ⌅ [861a8166] ↓ Combinatorics v1.1.0 ⇒ v1.0.2 [loaded: v1.1.0] [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [2b5f629d] + DiffEqBase v6.199.0 [459566f4] + DiffEqCallbacks v4.12.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [5b8099bc] + DomainSets v0.7.16 [7c1d4256] + DynamicPolynomials v0.6.4 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [64ca27bc] + FindFirstFunctions v1.8.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [86223c79] + Graphs v1.13.4 [3263718b] + ImplicitDiscreteSolve v1.6.0 [d25df0c9] + Inflate v0.1.5 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [82899510] + IteratorInterfaceExtensions v1.0.0 [ae98c720] + Jieko v0.2.1 [ccbc3e58] + JumpProcesses v9.21.1 [ba0b0d4f] + Krylov v0.10.5 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.6 [7ed4a6bd] + LinearSolve v3.57.0 [e6f89c97] + LoggingExtras v1.2.0 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [961ee093] + ModelingToolkit v11.8.0 [7771a370] + ModelingToolkitBase v1.7.1 [6bb917b9] + ModelingToolkitTearing v1.2.4 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [102ac46a] + MultivariatePolynomials v0.5.13 [d8a4904e] + MutableArithmetics v1.6.7 [77ba4419] + NaNMath v1.1.3 [be0214bd] + NonlinearSolveBase v2.11.1 [5959db7a] + NonlinearSolveFirstOrder v1.11.1 [6fe1bfb0] + OffsetArrays v1.17.0 [bbf590c4] + OrdinaryDiffEqCore v3.2.0 [e409e4f3] + PoissonRandom v0.4.7 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [d236fae5] + PreallocationTools v0.4.34 [988b38a3] + ReadOnlyArrays v0.2.0 [795d4caa] + ReadOnlyDicts v1.0.1 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.46.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [9dfe8606] + SCCNonlinearSolve v1.9.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.135.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [53ae85a6] + SciMLStructures v1.10.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [699a6c99] + SimpleTraits v0.9.5 [64909d44] + StateSelection v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [7792a7ef] + StrideArraysCore v0.5.8 [2efcf032] + SymbolicIndexingInterface v0.3.46 [19f23fe9] + SymbolicLimits v1.1.0 [d1185830] + SymbolicUtils v4.14.0 [0c5d862f] + Symbolics v7.10.0 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [8290d209] + ThreadingUtilities v0.5.5 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [d30d5f5c] + WeakCacheSets v0.1.0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [3fa0cd96] + REPL v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Resolving package versions... Updating `/tmp/jl_NijACx/Project.toml` [0c5d862f] + Symbolics v7.10.0 Manifest No packages added to or removed from `/tmp/jl_NijACx/Manifest.toml` Precompiling packages... 1452.5 ms ✓ ReadOnlyDicts 1345.3 ms ✓ MaybeInplace 6360.3 ms ✓ SciMLOperators 4557.4 ms ✓ SymbolicIndexingInterface 1961.5 ms ✓ TruncatedStacktraces 2497.3 ms ✓ SimpleTraits 4538.2 ms ✓ FindFirstFunctions 8493.9 ms ✓ Static 4072.4 ms ✓ SciMLStructures 1642.6 ms ✓ PreallocationTools 1555.4 ms ✓ FillArrays → FillArraysStaticArraysExt 1543.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1527.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1639.9 ms ✓ Accessors → StaticArraysExt 1466.6 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 9958.6 ms ✓ ForwardDiff 1612.4 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 1117.8 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1632.8 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 11675.9 ms ✓ RecursiveArrayTools 239524.4 ms ✓ SymbolicUtils 12942.9 ms ✓ Graphs 936.1 ms ✓ BitTwiddlingConvenienceFunctions 9329.3 ms ✓ StaticArrayInterface 2324.5 ms ✓ CPUSummary 24569.6 ms ✓ ArrayLayouts 2041.9 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1243.0 ms ✓ FastPower → FastPowerForwardDiffExt 4565.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1277.7 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1377.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt 1946.8 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1882.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 8907.9 ms ✓ SymbolicUtils → SymbolicUtilsChainRulesCoreExt 15054.4 ms ✓ SymbolicLimits 13714.4 ms ✓ BipartiteGraphs 2651.6 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1069.4 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1174.9 ms ✓ CloseOpenIntervals 1408.6 ms ✓ LayoutPointers 1851.3 ms ✓ PolyesterWeave 5069.3 ms ✓ BlockArrays 3546.6 ms ✓ ArrayLayouts → ArrayLayoutsSparseArraysExt 39607.2 ms ✓ SciMLBase 512451.8 ms ✓ Symbolics 4433.1 ms ✓ BipartiteGraphs → BipartiteGraphsSparseArraysExt 2306.5 ms ✓ StrideArraysCore 3167.6 ms ✓ BlockArrays → BlockArraysAdaptExt 4038.5 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 3761.9 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 7588.4 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 3938.7 ms ✓ SCCNonlinearSolve 22365.5 ms ✓ Symbolics → SymbolicsForwardDiffExt 19395.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 8464.9 ms ✓ StateSelection 5056.5 ms ✓ Polyester 21255.8 ms ✓ LinearSolve 12907.0 ms ✓ SciMLJacobianOperators 3674.3 ms ✓ SCCNonlinearSolve → SCCNonlinearSolveChainRulesCoreExt 18681.8 ms ✓ Symbolics → SymbolicsPreallocationToolsExt 2179.3 ms ✓ FastBroadcast 9145.8 ms ✓ LinearSolve → LinearSolveForwardDiffExt 10043.1 ms ✓ LinearSolve → LinearSolveSparseArraysExt 13874.5 ms ✓ LineSearch 23892.9 ms ✓ NonlinearSolveBase 2984.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 5639.5 ms ✓ LinearSolve → LinearSolveEnzymeExt 5611.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 4916.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3772.6 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 31710.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3956.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 10710.8 ms ✓ BracketingNonlinearSolve 68491.8 ms ✓ NonlinearSolveFirstOrder 4107.4 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 20272.5 ms ✓ DiffEqBase 9233.5 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 23305.4 ms ✓ SimpleNonlinearSolve 5210.6 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 4876.4 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4981.5 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 16863.1 ms ✓ DiffEqCallbacks 15327.0 ms ✓ OrdinaryDiffEqCore 4636.1 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 11715.6 ms ✓ JumpProcesses 4731.7 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 131564.5 ms ✓ ImplicitDiscreteSolve ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 51 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 unknown function (ip: 0x72bfbc279cbf) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./process.jl:685 wait at ./process.jl:686 jfptr_wait_46335.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2553 unknown function (ip: 0x7fd0ed780383) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2493 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x7fd0ed77825c) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 unknown function (ip: 0x7fd0ed76b9b9) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:515 unknown function (ip: 0x7fd0ed76af11) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x7fd0ed768690) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x7fd0ed76043f) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:689 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 _include at ./loading.jl:2930 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_55866.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7fd10978d249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000072bf454302e0 Total snapshots: 825. Utilization: 0% ╎825 @Base/asyncevent.jl:359 (::Base.var"#634#635"{FileWatching.Pidfile.var… ╎ 825 @Base/asyncevent.jl:163 _trywait(t::Timer) ╎ 825 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Sp… ╎ 825 @Base/task.jl:1228 wait() 824╎ 825 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized… ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007fd0ef3fc010 Total snapshots: 55. Utilization: 0% ╎55 @Base/client.jl:550 _start() ╎ 55 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 55 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 55 @Base/loading.jl:2930 _include(mapexpr::Function, mod::Module, _path:… ╎ 55 @Base/loading.jl:2870 include_string(mapexpr::typeof(identity), mod:… ╎ 55 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 55 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 55 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 55 @Pkg/src/API.jl:157 test ╎ ╎ 55 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.Pai… ╎ ╎ 55 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 55 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOCon… ╎ ╎ ╎ 55 @Pkg/src/API.jl:515 kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 55 @Pkg/src/API.jl:538 test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 55 @Pkg/…perations.jl:2384 test ╎ ╎ ╎ 55 @Pkg/…perations.jl:2478 test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 55 @Pkg/…erations.jl:2212 kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 55 @Pkg/…erations.jl:2222 #sandbox#182 ╎ ╎ ╎ ╎ 55 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 55 @Base/file.jl:932 mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 55 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 55 @Pkg/…ations.jl:2275 (::Pkg.Operations.var"#186#187… ╎ ╎ ╎ ╎ ╎ 55 @Pkg/…ations.jl:2161 with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 55 @Pkg/…tions.jl:2308 (::Pkg.Operations.var"#190#19… ╎ ╎ ╎ ╎ ╎ 55 @Base/env.jl:265 withenv(::Pkg.Operations.var"#2… ╎ ╎ ╎ ╎ ╎ 55 @Pkg/…tions.jl:2493 (::Pkg.Operations.var"#205#… ╎ ╎ ╎ ╎ ╎ ╎ 55 @Pkg/…ions.jl:2553 subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 55 @Base/…ess.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 55 @Base/…ess.jl:685 wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 55 @Base/…on.jl:141 wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ 55 @Base/…sk.jl:1228 wait() 54╎ ╎ ╎ ╎ ╎ ╎ ╎ 55 @Base/…sk.jl:1216 poptask(W::Base.Intrusi… [51] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StructuralIdentifiability/MQy2n/test/runtests.jl:69 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 unknown function (ip: 0x72bfbc279cbf) at (unknown file) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 43210781 (Pool: 43209284; Big: 1497); GC: 20 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_18905.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 23375972 (Pool: 23375320; Big: 652); GC: 19 PkgEval terminated after 2763.09s: test duration exceeded the time limit