Package evaluation to test ProtPlot on Julia 1.12.4 (422f456051*) started at 2026-01-29T21:39:19.294 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.69s ################################################################################ # Installation # Installing ProtPlot... Resolving package versions... Installed x265_jll ──────────────────── v4.1.0+0 Installed JpegTurbo_jll ─────────────── v3.1.4+0 Installed BioGenerics ───────────────── v0.1.5 Installed OffsetArrays ──────────────── v1.17.0 Installed libfdk_aac_jll ────────────── v2.0.4+0 Installed ImageIO ───────────────────── v0.6.9 Installed AxisArrays ────────────────── v0.4.8 Installed TiffImages ────────────────── v0.11.6 Installed Libmount_jll ──────────────── v2.41.2+0 Installed JpegTurbo ─────────────────── v0.1.6 Installed LERC_jll ──────────────────── v4.0.1+0 Installed HypergeometricFunctions ───── v0.3.28 Installed AdaptivePredicates ────────── v1.2.0 Installed PNGFiles ──────────────────── v0.4.4 Installed StatsFuns ─────────────────── v1.5.2 Installed Preferences ───────────────── v1.5.1 Installed Dierckx ───────────────────── v0.5.4 Installed Opus_jll ──────────────────── v1.6.0+0 Installed RelocatableFolders ────────── v1.0.1 Installed Unitful ───────────────────── v1.27.0 Installed PDMats ────────────────────── v0.11.37 Installed Sixel ─────────────────────── v0.1.5 Installed NNlib ─────────────────────── v0.9.33 Installed InlineStrings ─────────────── v1.4.5 Installed EarCut_jll ────────────────── v2.2.4+0 Installed ProgressMeter ─────────────── v1.11.0 Installed Contour ───────────────────── v0.6.3 Installed Grisu ─────────────────────── v1.0.2 Installed DynamicStructs ────────────── v0.2.3 Installed OpenEXR ───────────────────── v0.3.3 Installed PlotUtils ─────────────────── v1.4.4 Installed StaticArrays ──────────────── v1.9.16 Installed BaseDirs ──────────────────── v1.3.2 Installed EnumX ─────────────────────── v1.0.6 Installed ScopedValues ──────────────── v1.5.0 Installed CEnum ─────────────────────── v0.5.0 Installed Cairo_jll ─────────────────── v1.18.5+0 Installed Fontconfig_jll ────────────── v2.17.1+0 Installed NearestNeighbors ──────────── v0.4.26 Installed Netpbm ────────────────────── v1.1.1 Installed SignedDistanceFields ──────── v0.4.1 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed Statistics ────────────────── v1.11.1 Installed FilePaths ─────────────────── v0.9.0 Installed FileIO ────────────────────── v1.17.1 Installed RoundingEmulator ──────────── v0.2.1 Installed Missings ──────────────────── v1.2.0 Installed Distances ─────────────────── v0.10.12 Installed MuladdMacro ───────────────── v0.2.4 Installed RealDot ───────────────────── v0.1.0 Installed AssigningSecondaryStructure ─ v0.5.2 Installed TriplotBase ───────────────── v0.1.0 Installed IrrationalConstants ───────── v0.2.6 Installed JLD2 ──────────────────────── v0.6.3 Installed SIMD ──────────────────────── v3.7.2 Installed Showoff ───────────────────── v1.0.3 Installed ArnoldiMethod ─────────────── v0.4.0 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed Giflib_jll ────────────────── v5.2.3+0 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.30+0 Installed JSON ──────────────────────── v0.21.4 Installed PolygonOps ────────────────── v0.1.2 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed PtrArrays ─────────────────── v1.3.0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed XZ_jll ────────────────────── v5.8.2+0 Installed QOI ───────────────────────── v1.0.2 Installed HarfBuzz_jll ──────────────── v8.5.1+0 Installed SpecialFunctions ──────────── v2.6.1 Installed isoband_jll ───────────────── v0.2.3+0 Installed ProtPlot ──────────────────── v0.5.20 Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed PkgVersion ────────────────── v0.3.3 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed LZO_jll ───────────────────── v2.10.3+0 Installed StaticArraysCore ──────────── v1.4.4 Installed BioSymbols ────────────────── v5.2.0 Installed MPIPreferences ────────────── v0.1.11 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed UnicodeFun ────────────────── v0.4.1 Installed WebP ──────────────────────── v0.1.3 Installed MathTeXEngine ─────────────── v0.6.7 Installed TranscodingStreams ────────── v0.11.3 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed ImageMetadata ─────────────── v0.9.10 Installed Ratios ────────────────────── v0.4.5 Installed x264_jll ──────────────────── v10164.0.1+0 Installed DataStructures ────────────── v0.19.3 Installed Colors ────────────────────── v0.13.1 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed PaddedViews ───────────────── v0.5.12 Installed MappedArrays ──────────────── v0.4.3 Installed FreeType ──────────────────── v4.1.1 Installed Graphs ────────────────────── v1.13.4 Installed StatsAPI ──────────────────── v1.8.0 Installed Compat ────────────────────── v4.18.1 Installed Backboner ─────────────────── v0.12.2 Installed GridLayoutBase ────────────── v0.11.2 Installed CodecZlib ─────────────────── v0.7.8 Installed Automa ────────────────────── v1.1.0 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed LazyModules ───────────────── v0.3.1 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed PeriodicTable ─────────────── v1.2.1 Installed MosaicViews ───────────────── v0.3.4 Installed libpng_jll ────────────────── v1.6.54+0 Installed libaom_jll ────────────────── v3.13.1+0 Installed StatsBase ─────────────────── v0.34.10 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed Scratch ───────────────────── v1.3.0 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed TensorCore ────────────────── v0.1.1 Installed Zstd_jll ──────────────────── v1.5.7+1 Installed ColorTypes ────────────────── v0.12.1 Installed ColorSchemes ──────────────── v3.31.0 Installed ImageCore ─────────────────── v0.10.5 Installed Expat_jll ─────────────────── v2.7.3+0 Installed TableTraits ───────────────── v1.0.1 Installed Isoband ───────────────────── v0.1.1 Installed FreeTypeAbstraction ───────── v0.10.8 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed Inflate ───────────────────── v0.1.5 Installed Parsers ───────────────────── v2.8.3 Installed Imath_jll ─────────────────── v3.2.2+0 Installed Libtiff_jll ───────────────── v4.7.2+0 Installed OpenMPI_jll ───────────────── v5.0.9+0 Installed HashArrayMappedTries ──────── v0.2.0 Installed Extents ───────────────────── v0.1.6 Installed Format ────────────────────── v1.3.7 Installed Dierckx_jll ───────────────── v0.2.0+0 Installed Packing ───────────────────── v0.5.1 Installed JLLWrappers ───────────────── v1.7.1 Installed DataValueInterfaces ───────── v1.0.0 Installed AbstractFFTs ──────────────── v1.5.0 Installed ConstructionBase ──────────── v1.6.0 Installed ColorVectorSpace ──────────── v0.11.0 Installed Libffi_jll ────────────────── v3.4.7+0 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed ChunkCodecCore ────────────── v1.0.1 Installed OrderedCollections ────────── v1.8.1 Installed AbstractTrees ─────────────── v0.4.5 Installed ChainRulesCore ────────────── v1.26.0 Installed Ogg_jll ───────────────────── v1.3.6+0 Installed ExactPredicates ───────────── v2.2.9 Installed Reexport ──────────────────── v1.2.2 Installed KernelDensity ─────────────── v0.6.11 Installed ComputePipeline ───────────── v0.1.6 Installed LogExpFunctions ───────────── v0.3.29 Installed Animations ────────────────── v0.4.2 Installed KernelAbstractions ────────── v0.9.39 Installed Quaternions ───────────────── v0.7.7 Installed StackViews ────────────────── v0.1.2 Installed Interpolations ────────────── v0.16.2 Installed AliasTables ───────────────── v1.1.3 Installed RangeArrays ───────────────── v0.3.2 Installed MacroTools ────────────────── v0.5.16 Installed Rotations ─────────────────── v1.7.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed IntervalArithmetic ────────── v1.0.2 Installed UnsafeAtomics ─────────────── v0.3.0 Installed InverseFunctions ──────────── v0.1.17 Installed Libuuid_jll ───────────────── v2.41.2+0 Installed SimpleTraits ──────────────── v0.9.5 Installed Atomix ────────────────────── v1.1.2 Installed HDF5 ──────────────────────── v0.17.2 Installed DocStringExtensions ───────── v0.9.5 Installed OpenEXR_jll ───────────────── v3.4.4+0 Installed ColorBrewer ───────────────── v0.4.2 Installed GPUArraysCore ─────────────── v0.2.0 Installed libaec_jll ────────────────── v1.1.5+0 Installed StableRNGs ────────────────── v1.0.4 Installed Adapt ─────────────────────── v4.4.0 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed libass_jll ────────────────── v0.17.4+0 Installed BioStructures ─────────────── v4.7.0 Installed Pixman_jll ────────────────── v0.44.2+0 Installed Rmath ─────────────────────── v0.9.0 Installed XML2_jll ──────────────────── v2.13.9+0 Installed IntegerMathUtils ──────────── v0.1.3 Installed ImageBase ─────────────────── v0.1.7 Installed IntervalSets ──────────────── v0.7.13 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed IterTools ─────────────────── v1.10.0 Installed IndirectArrays ────────────── v1.0.0 Installed FFMPEG_jll ────────────────── v8.0.1+0 Installed Tables ────────────────────── v1.12.1 Installed GeometryBasics ────────────── v0.5.10 Installed ProteinChains ─────────────── v0.7.6 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed DataAPI ───────────────────── v1.16.0 Installed RecipesBase ───────────────── v1.3.4 Installed FixedPointNumbers ─────────── v0.8.5 Installed ShaderAbstractions ────────── v0.5.0 Installed Primes ────────────────────── v0.5.7 Installed LAME_jll ──────────────────── v3.100.3+0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed GettextRuntime_jll ────────── v0.22.4+0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed PrecompileTools ───────────── v1.3.3 Installed FFTA ──────────────────────── v0.3.1 Installed Makie ─────────────────────── v0.24.8 Installed StructArrays ──────────────── v0.7.2 Installed Glib_jll ──────────────────── v2.86.2+0 Installed libsixel_jll ──────────────── v1.10.5+0 Installed libvorbis_jll ─────────────── v1.3.8+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed FilePathsBase ─────────────── v0.9.24 Installed AxisAlgorithms ────────────── v1.1.0 Installed BitIntegers ───────────────── v0.3.7 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed FillArrays ────────────────── v1.16.0 Installed QuadGK ────────────────────── v2.11.2 Installed ImageAxes ─────────────────── v0.6.12 Installed CRlibm ────────────────────── v1.0.2 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed Requires ──────────────────── v1.3.1 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed Observables ───────────────── v0.5.5 Installed WoodburyMatrices ──────────── v1.1.0 Installed libwebp_jll ───────────────── v1.6.0+0 Installed SortingAlgorithms ─────────── v1.2.2 Installed Distributions ─────────────── v0.25.123 Installed DelaunayTriangulation ─────── v1.6.6 Installing 60 artifacts Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact FriBidi 78.9 KiB Installed artifact LAME 292.5 KiB Installed artifact libpng 328.7 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact EarCut 80.5 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact MPICH 3.3 MiB Installed artifact Cairo 2.2 MiB Installed artifact Opus 960.8 KiB Installed artifact Expat 283.3 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact XML2 2.5 MiB Installed artifact Zstd 646.0 KiB Installed artifact LZO 208.9 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Hwloc 3.5 MiB Installed artifact libaec 49.6 KiB Installed artifact libwebp 2.6 MiB Installed artifact CRlibm 169.5 KiB Installed artifact LERC 272.9 KiB Installed artifact Libuuid 3.7 MiB Installed artifact Bzip2 503.5 KiB Installed artifact Libffi 44.2 KiB Installed artifact isoband 25.7 KiB Installed artifact Pixman 372.2 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact libaom 6.4 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact FreeType2 1.5 MiB Installed artifact Ogg 250.3 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Libiconv 1.9 MiB Installed artifact libfdk_aac 2.8 MiB Installed artifact x265 1.4 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact x264 2.1 MiB Installed artifact FFMPEG 11.7 MiB Installed artifact XZ 1.5 MiB Installed artifact Graphite2 120.2 KiB Installed artifact Dierckx 149.2 KiB Installed artifact Libtiff 2.3 MiB Installed artifact Giflib 154.6 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact MakieAssets 24.9 MiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Glib 7.7 MiB Installed artifact libsixel 177.3 KiB Installed artifact libvorbis 271.0 KiB Installed artifact Libmount 6.5 MiB Installed artifact Imath 184.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenEXR 1.4 MiB Installed artifact libass 427.8 KiB Installed artifact JpegTurbo 1.4 MiB Installed artifact HDF5 5.7 MiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact Xorg_libX11 13.9 MiB Updating `~/.julia/environments/v1.12/Project.toml` [77b3afcc] + ProtPlot v0.5.20 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [ec485272] + ArnoldiMethod v0.4.0 [8ed43e74] + AssigningSecondaryStructure v0.5.2 [a9b6321e] + Atomix v1.1.2 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [9ac9c2a2] + Backboner v0.12.2 [18cc8868] + BaseDirs v1.3.2 [47718e42] + BioGenerics v0.1.5 [de9282ab] + BioStructures v4.7.0 [3c28c6f8] + BioSymbols v5.2.0 [c3b6d118] + BitIntegers v0.3.7 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.2 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.1 [95dc2771] + ComputePipeline v0.1.6 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.6 [39dd38d3] + Dierckx v0.5.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [e139c391] + DynamicStructs v0.2.3 [4e289a0a] + EnumX v1.0.6 [429591f6] + ExactPredicates v2.2.9 [411431e0] + Extents v0.1.6 [b86e33f2] + FFTA v0.3.1 [5789e2e9] + FileIO v1.17.1 [8fc22ac5] + FilePaths v0.9.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [46192b85] + GPUArraysCore v0.2.0 [5c1252a2] + GeometryBasics v0.5.10 [86223c79] + Graphs v1.13.4 [3955a311] + GridLayoutBase v0.11.2 [42e2da0e] + Grisu v1.0.2 [f67ccb44] + HDF5 v0.17.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.2 [d1acc4aa] + IntervalArithmetic v1.0.2 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.3 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.6 [63c18a36] + KernelAbstractions v0.9.39 [5ab0869b] + KernelDensity v0.6.11 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [ee78f7c6] + Makie v0.24.8 [dbb5928d] + MappedArrays v0.4.3 [0a4f8689] + MathTeXEngine v0.6.7 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [46d2c3a1] + MuladdMacro v0.2.4 [872c559c] + NNlib v0.9.33 [b8a86587] + NearestNeighbors v0.4.26 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.4 [647866c9] + PolygonOps v0.1.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [77b3afcc] + ProtPlot v0.5.20 [b8e8f2a5] + ProteinChains v0.7.6 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.2 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.7 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [6038ab10] + Rotations v1.7.1 [5eaf0fd0] + RoundingEmulator v0.2.1 [fdea26ae] + SIMD v3.7.2 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [65257c39] + ShaderAbstractions v0.5.0 [992d4aef] + Showoff v1.0.3 [73760f76] + SignedDistanceFields v0.4.1 [699a6c99] + SimpleTraits v0.9.5 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.6 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.27.0 [013be700] + UnsafeAtomics v0.3.0 [e3aaa7dc] + WebP v0.1.3 [efce3f68] + WoodburyMatrices v1.1.0 [6e34b625] + Bzip2_jll v1.0.9+0 [4e9b3aee] + CRlibm_jll v1.0.1+0 [83423d85] + Cairo_jll v1.18.5+0 [cd4c43a9] + Dierckx_jll v0.2.0+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [905a6f67] + Imath_jll v3.2.2+0 [aacddb02] + JpegTurbo_jll v3.1.4+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e7412a2a] + Ogg_jll v1.3.6+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.30+0 [18a262bb] + OpenEXR_jll v3.4.4+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.2+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [9a68df92] + isoband_jll v0.2.3+0 [477f73a3] + libaec_jll v1.1.5+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.54+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 37.28s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4364.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... Precompiling packages... 915.3 ms ✓ RangeArrays 826.3 ms ✓ MuladdMacro 7842.8 ms ✓ BaseDirs 1099.7 ms ✓ AbstractFFTs 922.2 ms ✓ LaTeXStrings 878.5 ms ✓ IndirectArrays 831.2 ms ✓ PolygonOps 731.2 ms ✓ IteratorInterfaceExtensions 3848.3 ms ✓ UnsafeAtomics 882.2 ms ✓ TensorCore 4139.6 ms ✓ ModernGL 855.3 ms ✓ StatsAPI 954.7 ms ✓ Contour 979.6 ms ✓ ChunkCodecCore 3620.2 ms ✓ CEnum 1701.8 ms ✓ OffsetArrays 931.9 ms ✓ TriplotBase 2553.3 ms ✓ Format 1927.7 ms ✓ FillArrays 874.5 ms ✓ IntegerMathUtils 989.3 ms ✓ InverseFunctions 1130.1 ms ✓ Statistics 1184.5 ms ✓ IterTools 7570.6 ms ✓ MacroTools 4184.2 ms ✓ Grisu 4122.8 ms ✓ OrderedCollections 3811.5 ms ✓ Observables 1209.1 ms ✓ Requires 774.8 ms ✓ DataValueInterfaces 1052.7 ms ✓ EnumX 923.4 ms ✓ RealDot 949.7 ms ✓ StableRNGs 762.7 ms ✓ Reexport 1157.1 ms ✓ DocStringExtensions 1808.4 ms ✓ InlineStrings 1630.1 ms ✓ AbstractTrees 5146.9 ms ✓ IrrationalConstants 1082.2 ms ✓ IntervalSets 1001.5 ms ✓ RoundingEmulator 4311.5 ms ✓ BitIntegers 1011.9 ms ✓ Extents 819.6 ms ✓ PtrArrays 1261.7 ms ✓ TranscodingStreams 949.3 ms ✓ HashArrayMappedTries 2864.2 ms ✓ AdaptivePredicates 3791.5 ms ✓ LazyModules 1006.3 ms ✓ Inflate 3993.4 ms ✓ ConstructionBase 911.4 ms ✓ DataAPI 1012.3 ms ✓ StaticArraysCore 1018.5 ms ✓ MappedArrays 1900.5 ms ✓ ProgressMeter 1822.8 ms ✓ PDMats 1389.8 ms ✓ WoodburyMatrices 40475.5 ms ✓ Unitful 928.8 ms ✓ Scratch 1206.1 ms ✓ Preferences 3870.2 ms ✓ Compat 3014.3 ms ✓ UnicodeFun 3879.3 ms ✓ PkgVersion 3974.4 ms ✓ AbstractFFTs → AbstractFFTsTestExt 811.3 ms ✓ TableTraits 1014.3 ms ✓ Atomix 979.6 ms ✓ ChunkCodecLibZlib 851.6 ms ✓ StackViews 926.8 ms ✓ PaddedViews 1453.4 ms ✓ FillArrays → FillArraysSparseArraysExt 1145.8 ms ✓ Primes 1730.4 ms ✓ InverseFunctions → InverseFunctionsTestExt 912.6 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1570.9 ms ✓ SignedDistanceFields 6717.9 ms ✓ FixedPointNumbers 3797.0 ms ✓ Distances 1294.6 ms ✓ Statistics → SparseArraysExt 889.1 ms ✓ FillArrays → FillArraysStatisticsExt 3177.8 ms ✓ SimpleTraits 865.2 ms ✓ Showoff 3459.7 ms ✓ DataStructures 866.2 ms ✓ Ratios 980.6 ms ✓ Adapt 9114.8 ms ✓ FileIO 1055.5 ms ✓ Quaternions 1392.1 ms ✓ LogExpFunctions 868.1 ms ✓ IntervalSets → IntervalSetsRandomExt 655.7 ms ✓ IntervalSets → IntervalSetsStatisticsExt 903.7 ms ✓ AliasTables 3532.9 ms ✓ BioGenerics 943.4 ms ✓ CodecZlib 903.4 ms ✓ ScopedValues 818.0 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 800.7 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 3594.3 ms ✓ Missings 1334.1 ms ✓ FillArrays → FillArraysPDMatsExt 1334.8 ms ✓ AxisAlgorithms 1709.1 ms ✓ Unitful → ConstructionBaseUnitfulExt 1744.3 ms ✓ Unitful → InverseFunctionsUnitfulExt 1837.8 ms ✓ Unitful → PrintfExt 1128.2 ms ✓ RelocatableFolders 1151.3 ms ✓ JLLWrappers 1483.8 ms ✓ MPIPreferences 859.9 ms ✓ PrecompileTools 4396.9 ms ✓ ComputePipeline 899.5 ms ✓ Compat → CompatLinearAlgebraExt 4513.8 ms ✓ Tables 1008.7 ms ✓ MosaicViews 2942.7 ms ✓ FFTA 5449.5 ms ✓ ColorTypes 1354.7 ms ✓ Distances → DistancesSparseArraysExt 1107.0 ms ✓ SortingAlgorithms 5084.9 ms ✓ QuadGK 895.4 ms ✓ Ratios → RatiosFixedPointNumbersExt 1254.0 ms ✓ Adapt → AdaptSparseArraysExt 1305.7 ms ✓ GPUArraysCore 913.3 ms ✓ OffsetArrays → OffsetArraysAdaptExt 800.9 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1596.3 ms ✓ AxisArrays 6431.6 ms ✓ PeriodicTable 1453.0 ms ✓ Graphite2_jll 1435.4 ms ✓ Libmount_jll 1135.3 ms ✓ EpollShim_jll 1458.5 ms ✓ LLVMOpenMP_jll 1434.2 ms ✓ Bzip2_jll 1465.1 ms ✓ Xorg_libpciaccess_jll 1451.1 ms ✓ libaec_jll 1427.9 ms ✓ Rmath_jll 1362.9 ms ✓ Xorg_libXau_jll 1307.5 ms ✓ libpng_jll 1336.8 ms ✓ libfdk_aac_jll 1337.3 ms ✓ Imath_jll 1328.2 ms ✓ Giflib_jll 1371.3 ms ✓ LAME_jll 1323.8 ms ✓ LERC_jll 1378.2 ms ✓ Dierckx_jll 1338.0 ms ✓ EarCut_jll 1328.5 ms ✓ CRlibm_jll 1377.4 ms ✓ JpegTurbo_jll 1377.8 ms ✓ XZ_jll 1338.4 ms ✓ Ogg_jll 1331.3 ms ✓ Xorg_libXdmcp_jll 1335.0 ms ✓ x265_jll 1353.1 ms ✓ x264_jll 1434.0 ms ✓ libaom_jll 1416.3 ms ✓ Zstd_jll 1424.5 ms ✓ Expat_jll 1325.4 ms ✓ LZO_jll 1372.9 ms ✓ Opus_jll 1126.0 ms ✓ MicrosoftMPI_jll 1266.4 ms ✓ Xorg_xtrans_jll 1437.5 ms ✓ Libiconv_jll 1317.2 ms ✓ Libffi_jll 1325.0 ms ✓ isoband_jll 1387.8 ms ✓ OpenSpecFun_jll 1409.6 ms ✓ Libuuid_jll 1409.5 ms ✓ FriBidi_jll 1409.8 ms ✓ OpenBLASConsistentFPCSR_jll 4266.0 ms ✓ MPItrampoline_jll 17442.6 ms ✓ StaticArrays 3099.0 ms ✓ RecipesBase 2699.0 ms ✓ BioSymbols 19833.3 ms ✓ SIMD 21579.0 ms ✓ Parsers 2339.0 ms ✓ FilePathsBase 1528.9 ms ✓ DynamicStructs 5157.6 ms ✓ ChainRulesCore 4399.6 ms ✓ StructArrays 6491.7 ms ✓ ColorVectorSpace 1250.0 ms ✓ ColorTypes → StyledStringsExt 9633.6 ms ✓ Colors 7216.1 ms ✓ StatsBase 1417.4 ms ✓ Pixman_jll 1379.0 ms ✓ FreeType2_jll 1615.6 ms ✓ Rmath 1458.8 ms ✓ OpenEXR_jll 1493.1 ms ✓ Dierckx 1233.6 ms ✓ CRlibm 1497.3 ms ✓ libsixel_jll 1404.6 ms ✓ libvorbis_jll 1473.9 ms ✓ Xorg_libxcb_jll 1273.4 ms ✓ ChunkCodecLibZstd 1443.9 ms ✓ Libtiff_jll 1432.9 ms ✓ Dbus_jll 1476.0 ms ✓ XML2_jll 1461.6 ms ✓ GettextRuntime_jll 1463.2 ms ✓ Wayland_jll 851.0 ms ✓ Isoband 5715.4 ms ✓ SpecialFunctions 6448.2 ms ✓ ArnoldiMethod 1384.2 ms ✓ StaticArrays → StaticArraysStatisticsExt 1500.9 ms ✓ FillArrays → FillArraysStaticArraysExt 1414.9 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1324.3 ms ✓ Adapt → AdaptStaticArraysExt 6837.6 ms ✓ Rotations 26847.9 ms ✓ GeometryBasics 1347.0 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 18189.2 ms ✓ BioStructures 25858.2 ms ✓ Automa 4048.6 ms ✓ JSON 999.2 ms ✓ InlineStrings → ParsersExt 1338.8 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3222.4 ms ✓ FilePathsBase → FilePathsBaseTestExt 1612.8 ms ✓ FilePaths 4159.9 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 909.2 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 909.1 ms ✓ Distances → DistancesChainRulesCoreExt 3568.1 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 4267.0 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 928.7 ms ✓ StructArrays → StructArraysAdaptExt 1345.2 ms ✓ StructArrays → StructArraysSparseArraysExt 4388.6 ms ✓ StructArrays → StructArraysStaticArraysExt 989.7 ms ✓ StructArrays → StructArraysLinearAlgebraExt 5206.0 ms ✓ QOI 60628.6 ms ✓ TiffImages 1277.6 ms ✓ Animations 38910.6 ms ✓ ImageCore 8659.1 ms ✓ ColorSchemes 1482.2 ms ✓ PDMats → StatsBaseExt 1867.5 ms ✓ FreeType 1538.1 ms ✓ Fontconfig_jll 5646.1 ms ✓ OpenEXR 7725.9 ms ✓ IntervalArithmetic 1411.9 ms ✓ Xorg_libX11_jll 53252.3 ms ✓ JLD2 1489.2 ms ✓ Hwloc_jll 1479.2 ms ✓ Glib_jll 4495.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2123.9 ms ✓ HypergeometricFunctions 1213.2 ms ✓ ColorVectorSpace → SpecialFunctionsExt 9499.6 ms ✓ NearestNeighbors 13055.4 ms ✓ Graphs 11636.8 ms ✓ KernelAbstractions 1996.2 ms ✓ Rotations → RotationsRecipesBaseExt 14859.7 ms ✓ GridLayoutBase 2823.6 ms ✓ Packing 6078.0 ms ✓ ShaderAbstractions 10392.5 ms ✓ MeshIO 3006.7 ms ✓ ColorBrewer 6645.2 ms ✓ Interpolations 4150.2 ms ✓ ImageBase 6516.1 ms ✓ PNGFiles 9578.1 ms ✓ Sixel 10411.6 ms ✓ JpegTurbo 20055.7 ms ✓ PlotUtils 7946.5 ms ✓ FreeTypeAbstraction 1447.4 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 956.1 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 1432.2 ms ✓ IntervalArithmetic → IntervalArithmeticRecipesBaseExt 1368.6 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 1435.9 ms ✓ Xorg_libXrender_jll 1462.1 ms ✓ Xorg_libXext_jll 1453.7 ms ✓ Xorg_libXfixes_jll 1463.0 ms ✓ Xorg_libxkbfile_jll 3688.1 ms ✓ OpenMPI_jll 4198.1 ms ✓ MPICH_jll 4975.8 ms ✓ StatsFuns 2189.3 ms ✓ AssigningSecondaryStructure 3246.0 ms ✓ Graphs → GraphsSharedArraysExt 3002.8 ms ✓ KernelAbstractions → SparseArraysExt 2263.9 ms ✓ KernelAbstractions → LinearAlgebraExt 2612.9 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 3522.9 ms ✓ Interpolations → InterpolationsUnitfulExt 6429.4 ms ✓ ImageAxes 31187.8 ms ✓ MathTeXEngine 8750.8 ms ✓ ExactPredicates 1386.1 ms ✓ Xorg_libXinerama_jll 1442.6 ms ✓ Xorg_libXrandr_jll 1432.9 ms ✓ Libglvnd_jll 1462.3 ms ✓ Cairo_jll 1447.6 ms ✓ Xorg_libXcursor_jll 1470.9 ms ✓ Xorg_libXi_jll 1425.2 ms ✓ Xorg_xkbcomp_jll 5223.3 ms ✓ HDF5_jll 996.6 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3635.6 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9257.6 ms ✓ Distributions 14664.1 ms ✓ NNlib 3744.0 ms ✓ ImageMetadata 12811.7 ms ✓ DelaunayTriangulation 1647.3 ms ✓ libwebp_jll 1511.5 ms ✓ HarfBuzz_jll 1247.5 ms ✓ Xorg_xkeyboard_config_jll 18897.7 ms ✓ HDF5 3453.3 ms ✓ Distributions → DistributionsTestExt 5446.9 ms ✓ Distributions → DistributionsChainRulesCoreExt 2760.4 ms ✓ NNlib → NNlibSpecialFunctionsExt 15179.7 ms ✓ Backboner 8474.9 ms ✓ Netpbm 8935.2 ms ✓ WebP 1555.5 ms ✓ libass_jll 1522.4 ms ✓ Pango_jll 1407.1 ms ✓ xkbcommon_jll 3911.9 ms ✓ KernelDensity 20977.4 ms ✓ ProteinChains 5110.8 ms ✓ ImageIO 1718.7 ms ✓ FFMPEG_jll 1667.7 ms ✓ libdecor_jll 426901.2 ms ✓ Makie 1731.6 ms ✓ GLFW_jll 89339.1 ms ✓ ProtPlot 2778.4 ms ✓ GLFW ✗ GLMakie 299 dependencies successfully precompiled in 1785 seconds. 41 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: GLMakie Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.12/GLMakie/jl_krdsVY". ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:293 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:600 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:284 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:258 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:395 [8] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:20 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:17 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:15 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [14] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:103 [15] include(mod::Module, _path::String) @ Base ./Base.jl:306 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [20] include_string @ ./loading.jl:2880 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [22] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:14 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 1813.78s ################################################################################ # Testing # Testing ProtPlot Status `/tmp/jl_CfuWGV/Project.toml` [de9282ab] BioStructures v4.7.0 [e9467ef8] GLMakie v0.13.8 [77b3afcc] ProtPlot v0.5.20 [b8e8f2a5] ProteinChains v0.7.6 [8dfed614] Test v1.11.0 Status `/tmp/jl_CfuWGV/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [ec485272] ArnoldiMethod v0.4.0 [8ed43e74] AssigningSecondaryStructure v0.5.2 [a9b6321e] Atomix v1.1.2 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [9ac9c2a2] Backboner v0.12.2 [18cc8868] BaseDirs v1.3.2 [47718e42] BioGenerics v0.1.5 [de9282ab] BioStructures v4.7.0 [3c28c6f8] BioSymbols v5.2.0 [c3b6d118] BitIntegers v0.3.7 [fa961155] CEnum v0.5.0 [96374032] CRlibm v1.0.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.18.1 [95dc2771] ComputePipeline v0.1.6 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.6 [39dd38d3] Dierckx v0.5.4 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [e139c391] DynamicStructs v0.2.3 [4e289a0a] EnumX v1.0.6 [429591f6] ExactPredicates v2.2.9 [411431e0] Extents v0.1.6 [b86e33f2] FFTA v0.3.1 [5789e2e9] FileIO v1.17.1 [8fc22ac5] FilePaths v0.9.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [f7f18e0c] GLFW v3.4.6 [e9467ef8] GLMakie v0.13.8 [46192b85] GPUArraysCore v0.2.0 [5c1252a2] GeometryBasics v0.5.10 [86223c79] Graphs v1.13.4 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [d1acc4aa] IntervalArithmetic v1.0.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [b835a17e] JpegTurbo v0.1.6 [63c18a36] KernelAbstractions v0.9.39 [5ab0869b] KernelDensity v0.6.11 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [ee78f7c6] Makie v0.24.8 [dbb5928d] MappedArrays v0.4.3 [0a4f8689] MathTeXEngine v0.6.7 [7269a6da] MeshIO v0.5.3 [e1d29d7a] Missings v1.2.0 [66fc600b] ModernGL v1.1.8 [e94cdb99] MosaicViews v0.3.4 [46d2c3a1] MuladdMacro v0.2.4 [872c559c] NNlib v0.9.33 [b8a86587] NearestNeighbors v0.4.26 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [f57f5aa1] PNGFiles v0.4.4 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [69de0a69] Parsers v2.8.3 [7b2266bf] PeriodicTable v1.2.1 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.4 [647866c9] PolygonOps v0.1.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [77b3afcc] ProtPlot v0.5.20 [b8e8f2a5] ProteinChains v0.7.6 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.2 [1fd47b50] QuadGK v2.11.2 [94ee1d12] Quaternions v0.7.7 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [6038ab10] Rotations v1.7.1 [5eaf0fd0] RoundingEmulator v0.2.1 [fdea26ae] SIMD v3.7.2 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [65257c39] ShaderAbstractions v0.5.0 [992d4aef] Showoff v1.0.3 [73760f76] SignedDistanceFields v0.4.1 [699a6c99] SimpleTraits v0.9.5 [45858cf5] Sixel v0.1.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.4 [cae243ae] StackViews v0.1.2 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [731e570b] TiffImages v0.11.6 [3bb67fe8] TranscodingStreams v0.11.3 [981d1d27] TriplotBase v0.1.0 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.27.0 [013be700] UnsafeAtomics v0.3.0 [e3aaa7dc] WebP v0.1.3 [efce3f68] WoodburyMatrices v1.1.0 [6e34b625] Bzip2_jll v1.0.9+0 [4e9b3aee] CRlibm_jll v1.0.1+0 [83423d85] Cairo_jll v1.18.5+0 [ee1fde0b] Dbus_jll v1.16.2+0 [cd4c43a9] Dierckx_jll v0.2.0+0 [5ae413db] EarCut_jll v2.2.4+0 [2702e6a9] EpollShim_jll v0.0.20230411+1 [2e619515] Expat_jll v2.7.3+0 [b22a6f82] FFMPEG_jll v8.0.1+0 [a3f928ae] 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libass_jll v0.17.4+0 [1183f4f0] libdecor_jll v0.2.2+0 [f638f0a6] libfdk_aac_jll v2.0.4+0 [b53b4c65] libpng_jll v1.6.54+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.8+0 [c5f90fcd] libwebp_jll v1.6.0+0 ⌅ [1270edf5] x264_jll v10164.0.1+0 [dfaa095f] x265_jll v4.1.0+0 [d8fb68d0] xkbcommon_jll v1.13.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... Info Given GLMakie was explicitly requested, output will be shown live  ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:293 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace:  [1] _ErrorCallbackWrapper(code::Int32, description::Cstring)  @ GLFW ~/.julia/packages/GLFW/wA4ue/src/callback.jl:46  [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:600  [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:404  [4] Window  @ ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:362 [inlined]  [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing)  @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:284  [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing)  @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:258  [7] singleton_screen(debugging::Bool)  @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:395  [8] macro expansion  @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:20 [inlined]  [9] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined]  [10] macro expansion  @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:17 [inlined]  [11] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined]  [12] top-level scope  @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:15  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [14] top-level scope  @ ~/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:103  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3024  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2870  [20] include_string  @ ./loading.jl:2880 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:315  [22] _start()  @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:14 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:1 in expression starting at stdin:5 ✗ GLMakie 0 dependencies successfully precompiled in 83 seconds. 279 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: GLMakie Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.12/GLMakie/jl_GXjIin". ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:293 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:600 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/wA4ue/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:284 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:258 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/vdrwE/src/screen.jl:395 [8] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:20 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:17 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:15 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [14] top-level scope @ ~/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:103 [15] include(mod::Module, _path::String) @ Base ./Base.jl:306 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3024 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2870 [20] include_string @ ./loading.jl:2880 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:315 [22] _start() @ Base ./client.jl:550 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/precompiles.jl:14 in expression starting at /home/pkgeval/.julia/packages/GLMakie/vdrwE/src/GLMakie.jl:1 in expression starting at stdin: in expression starting at /home/pkgeval/.julia/packages/ProtPlot/yFfT1/test/runtests.jl:1 Testing failed after 100.34s ERROR: LoadError: Package ProtPlot errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 2003.75s: package fails to precompile