Package evaluation to test PartiallyObservedMarkovProcesses on Julia 1.12.4 (422f456051*) started at 2026-01-29T17:55:41.108 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.89s ################################################################################ # Installation # Installing PartiallyObservedMarkovProcesses... Resolving package versions... Installed OrdinaryDiffEqRKN ─────────────────── v1.9.0 Installed OrdinaryDiffEqRosenbrock ──────────── v1.22.0 Installed SciMLPublic ───────────────────────── v1.0.1 Installed HypergeometricFunctions ───────────── v0.3.28 Installed StatsFuns ─────────────────────────── v1.5.2 Installed Preferences ───────────────────────── v1.5.1 Installed LoggingExtras ─────────────────────── v1.2.0 Installed Accessors ─────────────────────────── v0.1.43 Installed SciMLLogging ──────────────────────── v1.8.0 Installed OrdinaryDiffEqStabilizedRK ────────── v1.8.0 Installed OrdinaryDiffEqSDIRK ───────────────── v1.11.0 Installed PDMats ────────────────────────────── v0.11.37 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed NonlinearSolve ────────────────────── v4.14.0 Installed SciMLJacobianOperators ────────────── v0.1.12 Installed InlineStrings ─────────────────────── v1.4.5 Installed TimerOutputs ──────────────────────── v0.5.29 Installed Polyester ─────────────────────────── v0.7.18 Installed OrdinaryDiffEqPRK ─────────────────── v1.8.0 Installed EnumX ─────────────────────────────── v1.0.6 Installed StaticArrays ──────────────────────── v1.9.16 Installed RecursiveArrayTools ───────────────── v3.46.0 Installed MaybeInplace ──────────────────────── v0.1.4 Installed InvertedIndices ───────────────────── v1.3.1 Installed FunctionWrappers ──────────────────── v1.1.3 Installed Statistics ────────────────────────── v1.11.1 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.9.0 Installed OrdinaryDiffEqCore ────────────────── v3.2.0 Installed DataFrames ────────────────────────── v1.8.1 Installed OrdinaryDiffEqSSPRK ───────────────── v1.11.0 Installed Missings ──────────────────────────── v1.2.0 Installed Static ────────────────────────────── v1.3.1 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed IrrationalConstants ───────────────── v0.2.6 Installed FiniteDiff ────────────────────────── v2.29.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed OrdinaryDiffEqVerner ──────────────── v1.10.0 Installed FastPower ─────────────────────────── v1.3.1 Installed OrdinaryDiffEqFIRK ────────────────── v1.20.0 Installed DiffEqBase ────────────────────────── v6.199.0 Installed NonlinearSolveQuasiNewton ─────────── v1.12.0 Installed PtrArrays ─────────────────────────── v1.3.0 Installed CpuId ─────────────────────────────── v0.3.1 Installed SciMLBase ─────────────────────────── v2.135.0 Installed BracketingNonlinearSolve ──────────── v1.6.2 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.19.0 Installed SentinelArrays ────────────────────── v1.4.9 Installed ADTypes ───────────────────────────── v1.21.0 Installed SimpleNonlinearSolve ──────────────── v2.10.0 Installed SpecialFunctions ──────────────────── v2.6.1 Installed LinearSolve ───────────────────────── v3.57.0 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed IfElse ────────────────────────────── v0.1.1 Installed LineSearch ────────────────────────── v0.1.6 Installed NaNMath ───────────────────────────── v1.1.3 Installed StaticArraysCore ──────────────────── v1.4.4 Installed ThreadingUtilities ────────────────── v0.5.5 Installed WorkerUtilities ───────────────────── v1.6.1 Installed ManualMemory ──────────────────────── v0.1.8 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed TranscodingStreams ────────────────── v0.11.3 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed NLSolversBase ─────────────────────── v8.0.0 Installed StatsAPI ──────────────────────────── v1.8.0 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed CommonSubexpressions ──────────────── v0.3.1 Installed ExprTools ─────────────────────────── v0.1.10 Installed Compat ────────────────────────────── v4.18.1 Installed DataStructures ────────────────────── v0.19.3 Installed PartiallyObservedMarkovProcesses ──── v0.5.1 Installed OrdinaryDiffEq ────────────────────── v6.106.0 Installed CodecZlib ─────────────────────────── v0.7.8 Installed OrdinaryDiffEqLinear ──────────────── v1.10.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed SciMLStructures ───────────────────── v1.10.0 Installed StaticArrayInterface ──────────────── v1.8.0 Installed DiffRules ─────────────────────────── v1.15.1 Installed StatsBase ─────────────────────────── v0.34.10 Installed OrdinaryDiffEqExplicitRK ──────────── v1.8.0 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed OrdinaryDiffEqPDIRK ───────────────── v1.10.0 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed LayoutPointers ────────────────────── v0.1.17 Installed GenericSchur ──────────────────────── v0.5.6 Installed OrdinaryDiffEqQPRK ────────────────── v1.8.0 Installed OrdinaryDiffEqFunctionMap ─────────── v1.9.0 Installed TableTraits ───────────────────────── v1.0.1 Installed DiffResults ───────────────────────── v1.1.0 Installed Parsers ───────────────────────────── v2.8.3 Installed SciMLOperators ────────────────────── v1.14.1 Installed PrettyTables ──────────────────────── v3.1.2 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.10.0 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed PooledArrays ──────────────────────── v1.4.3 Installed NonlinearSolveBase ────────────────── v2.11.1 Installed Setfield ──────────────────────────── v1.1.2 Installed JLLWrappers ───────────────────────── v1.7.1 Installed ExproniconLite ────────────────────── v0.10.14 Installed EnzymeCore ────────────────────────── v0.8.18 Installed DataValueInterfaces ───────────────── v1.0.0 Installed NonlinearSolveFirstOrder ──────────── v1.11.1 Installed ConstructionBase ──────────────────── v1.6.0 Installed OrderedCollections ────────────────── v1.8.1 Installed FastClosures ──────────────────────── v0.3.2 Installed OrdinaryDiffEqExponentialRK ───────── v1.12.0 Installed ChainRulesCore ────────────────────── v1.26.0 Installed PolyesterWeave ────────────────────── v0.2.2 Installed ArrayInterface ────────────────────── v7.22.0 Installed Reexport ──────────────────────────── v1.2.2 Installed LineSearches ──────────────────────── v7.6.0 Installed PreallocationTools ────────────────── v1.1.2 Installed LogExpFunctions ───────────────────── v0.3.29 Installed OrdinaryDiffEqTsit5 ───────────────── v1.9.0 Installed AliasTables ───────────────────────── v1.1.3 Installed OrdinaryDiffEqExtrapolation ───────── v1.13.0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed OrdinaryDiffEqLowStorageRK ────────── v1.11.0 Installed MacroTools ────────────────────────── v0.5.16 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed CompositionsBase ──────────────────── v0.1.2 Installed InverseFunctions ──────────────────── v0.1.17 Installed CommonSolve ───────────────────────── v0.2.6 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.10.0 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed Crayons ───────────────────────────── v4.1.1 Installed DocStringExtensions ───────────────── v0.9.5 Installed ExponentialUtilities ──────────────── v1.30.0 Installed Adapt ─────────────────────────────── v4.4.0 Installed DifferentiationInterface ──────────── v0.7.15 Installed Rmath ─────────────────────────────── v0.9.0 Installed StrideArraysCore ──────────────────── v0.5.8 Installed OrdinaryDiffEqDifferentiation ─────── v1.22.0 Installed OrdinaryDiffEqBDF ─────────────────── v1.14.0 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.9.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed Jieko ─────────────────────────────── v0.2.1 Installed CPUSummary ────────────────────────── v0.2.7 Installed OrdinaryDiffEqFeagin ──────────────── v1.8.0 Installed Krylov ────────────────────────────── v0.10.5 Installed Tables ────────────────────────────── v1.12.1 Installed RecipesBase ───────────────────────── v1.3.4 Installed DataAPI ───────────────────────────── v1.16.0 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed ConcreteStructs ───────────────────── v0.2.3 Installed Moshi ─────────────────────────────── v0.3.7 Installed PrecompileTools ───────────────────── v1.3.3 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.11.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed FillArrays ────────────────────────── v1.16.0 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed ForwardDiff ───────────────────────── v1.3.1 Installed QuadGK ────────────────────────────── v2.11.2 Installed Requires ──────────────────────────── v1.3.1 Installed OrdinaryDiffEqNordsieck ───────────── v1.8.0 Installed OrdinaryDiffEqDefault ─────────────── v1.12.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed StringManipulation ────────────────── v0.4.2 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.11.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed Distributions ─────────────────────── v0.25.123 Installed CSV ───────────────────────────────── v0.10.15 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.12/Project.toml` [32433216] + PartiallyObservedMarkovProcesses v0.5.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.199.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [d4d017d3] + ExponentialUtilities v1.30.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.3.1 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [ba0b0d4f] + Krylov v0.10.5 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.6 [d3d80556] + LineSearches v7.6.0 [7ed4a6bd] + LinearSolve v3.57.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [d41bc354] + NLSolversBase v8.0.0 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.14.0 [be0214bd] + NonlinearSolveBase v2.11.1 [5959db7a] + NonlinearSolveFirstOrder v1.11.1 [9a2c21bd] + NonlinearSolveQuasiNewton v1.12.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.106.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.9.0 [6ad6398a] + OrdinaryDiffEqBDF v1.14.0 [bbf590c4] + OrdinaryDiffEqCore v3.2.0 [50262376] + OrdinaryDiffEqDefault v1.12.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.22.0 [9286f039] + OrdinaryDiffEqExplicitRK v1.8.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.12.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.13.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.20.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.11.0 [521117fe] + OrdinaryDiffEqLinear v1.10.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.11.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.19.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.8.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.10.0 [5b33eab2] + OrdinaryDiffEqPRK v1.8.0 [04162be5] + OrdinaryDiffEqQPRK v1.8.0 [af6ede74] + OrdinaryDiffEqRKN v1.9.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.22.0 [2d112036] + OrdinaryDiffEqSDIRK v1.11.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.10.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] + OrdinaryDiffEqVerner v1.10.0 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [32433216] + PartiallyObservedMarkovProcesses v0.5.1 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [d236fae5] + PreallocationTools v1.1.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.46.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.135.0 [19f34311] + SciMLJacobianOperators v0.1.12 [a6db7da4] + SciMLLogging v1.8.0 [c0aeaf25] + SciMLOperators v1.14.1 [431bcebd] + SciMLPublic v1.0.1 [53ae85a6] + SciMLStructures v1.10.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.10.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.2 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Installation completed after 15.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4441.5 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... Precompiling packages... 4791.6 ms ✓ FunctionWrappers 1124.8 ms ✓ MuladdMacro 1191.0 ms ✓ ConcreteStructs 1012.6 ms ✓ LaTeXStrings 1010.9 ms ✓ ExprTools 704.0 ms ✓ IteratorInterfaceExtensions 975.8 ms ✓ WorkerUtilities 842.2 ms ✓ StatsAPI 1471.5 ms ✓ ADTypes 6374.8 ms ✓ ExproniconLite 2083.1 ms ✓ FillArrays 961.8 ms ✓ InverseFunctions 1097.3 ms ✓ Statistics 827.0 ms ✓ CommonSolve 7568.2 ms ✓ MacroTools 789.1 ms ✓ WinReg 945.9 ms ✓ ManualMemory 842.8 ms ✓ ShiftedArrays 4157.7 ms ✓ OrderedCollections 1185.9 ms ✓ Requires 747.9 ms ✓ DataValueInterfaces 834.6 ms ✓ EnumX 748.5 ms ✓ Reexport 764.0 ms ✓ SIMDTypes 1097.8 ms ✓ DocStringExtensions 1723.9 ms ✓ InlineStrings 5113.0 ms ✓ IrrationalConstants 814.8 ms ✓ CompositionsBase 779.5 ms ✓ PtrArrays 1235.3 ms ✓ TranscodingStreams 776.7 ms ✓ FastPower 3770.3 ms ✓ NaNMath 853.6 ms ✓ InvertedIndices 1308.6 ms ✓ EnzymeCore 727.7 ms ✓ IfElse 3880.3 ms ✓ ConstructionBase 791.3 ms ✓ CommonWorldInvalidations 803.7 ms ✓ DataAPI 4801.2 ms ✓ Crayons 802.0 ms ✓ FastClosures 855.8 ms ✓ SciMLPublic 968.1 ms ✓ StaticArraysCore 3034.0 ms ✓ GenericSchur 15566.1 ms ✓ Krylov 1804.6 ms ✓ PDMats 2037.3 ms ✓ SentinelArrays 1050.9 ms ✓ LoggingExtras 1923.9 ms ✓ CpuId 3926.7 ms ✓ Compat 1151.5 ms ✓ JLLWrappers 3096.1 ms ✓ RecipesBase 3404.9 ms ✓ StringManipulation 743.1 ms ✓ FunctionWrappersWrappers 3680.3 ms ✓ RuntimeGeneratedFunctions 6316.0 ms ✓ TimerOutputs 783.8 ms ✓ TableTraits 4755.8 ms ✓ DifferentiationInterface 3445.7 ms ✓ Jieko 1422.3 ms ✓ FillArrays → FillArraysSparseArraysExt 1816.5 ms ✓ InverseFunctions → InverseFunctionsTestExt 875.3 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1288.7 ms ✓ Statistics → SparseArraysExt 908.7 ms ✓ FillArrays → FillArraysStatisticsExt 1570.7 ms ✓ CommonSubexpressions 1667.7 ms ✓ TruncatedStacktraces 4754.6 ms ✓ ThreadingUtilities 3619.0 ms ✓ DataStructures 932.5 ms ✓ Adapt 14749.1 ms ✓ SparseMatrixColorings 995.2 ms ✓ InlineStrings → ParsersExt 1412.1 ms ✓ LogExpFunctions 837.5 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 982.8 ms ✓ AliasTables 923.9 ms ✓ CodecZlib 820.3 ms ✓ ADTypes → ADTypesEnzymeCoreExt 830.0 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 798.9 ms ✓ ADTypes → ADTypesConstructionBaseExt 1008.8 ms ✓ PooledArrays 3714.4 ms ✓ Missings 8225.5 ms ✓ Static 814.8 ms ✓ DiffResults 17598.1 ms ✓ StaticArrays 1419.8 ms ✓ FillArrays → FillArraysPDMatsExt 1394.3 ms ✓ SciMLLogging 896.9 ms ✓ Compat → CompatLinearAlgebraExt 1371.4 ms ✓ Rmath_jll 4577.3 ms ✓ IntelOpenMP_jll 4497.2 ms ✓ oneTBB_jll 1399.5 ms ✓ OpenSpecFun_jll 4559.1 ms ✓ Tables 1275.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 22167.6 ms ✓ Moshi 1100.0 ms ✓ SortingAlgorithms 5125.5 ms ✓ QuadGK 1255.2 ms ✓ Adapt → AdaptSparseArraysExt 3848.6 ms ✓ ArrayInterface 1175.7 ms ✓ GPUArraysCore 797.0 ms ✓ EnzymeCore → AdaptExt 1698.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 2224.4 ms ✓ WeakRefStrings 778.3 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 2938.4 ms ✓ Setfield 8058.1 ms ✓ Accessors 910.5 ms ✓ BitTwiddlingConvenienceFunctions 2478.7 ms ✓ CPUSummary 1397.1 ms ✓ StaticArrays → StaticArraysStatisticsExt 1526.8 ms ✓ FillArrays → FillArraysStaticArraysExt 1468.9 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1400.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1374.0 ms ✓ Adapt → AdaptStaticArraysExt 2440.9 ms ✓ FilePathsBase 5174.6 ms ✓ ChainRulesCore 5739.3 ms ✓ CategoricalArrays 1602.1 ms ✓ Rmath 9668.6 ms ✓ MKL_jll 5708.5 ms ✓ SpecialFunctions 887.6 ms ✓ StructUtils → StructUtilsTablesExt 45114.1 ms ✓ PrettyTables 7871.1 ms ✓ StatsBase 9907.7 ms ✓ StaticArrayInterface 1942.1 ms ✓ MaybeInplace 1245.7 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 742.2 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 4088.9 ms ✓ SciMLStructures 2402.2 ms ✓ PreallocationTools 806.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 795.6 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 2173.7 ms ✓ Accessors → LinearAlgebraExt 1919.9 ms ✓ Accessors → TestExt 1699.3 ms ✓ Accessors → StaticArraysExt 1875.0 ms ✓ PolyesterWeave 1376.6 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3250.5 ms ✓ FilePathsBase → FilePathsBaseTestExt 4225.5 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 871.4 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1340.7 ms ✓ EnzymeCore → EnzymeCoreChainRulesCoreExt 878.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 3324.7 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 4245.0 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 843.9 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1220.0 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 3902.3 ms ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt 1042.2 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 4169.1 ms ✓ FastGaussQuadrature 4506.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2203.0 ms ✓ HypergeometricFunctions 1347.6 ms ✓ DiffRules 92322.1 ms ✓ DataFrames 1501.0 ms ✓ PDMats → StatsBaseExt 1617.4 ms ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 1695.6 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1188.5 ms ✓ CloseOpenIntervals 1406.2 ms ✓ LayoutPointers 1308.5 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 1391.5 ms ✓ FiniteDiff 44725.8 ms ✓ ExponentialUtilities 5719.9 ms ✓ SciMLOperators 6557.1 ms ✓ SymbolicIndexingInterface 34335.7 ms ✓ CSV 5974.0 ms ✓ StatsFuns 10036.4 ms ✓ ForwardDiff 1942.6 ms ✓ StrideArraysCore 1252.7 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1333.9 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 983.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 5187.5 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 1100.1 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1653.5 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 3277.2 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 11265.9 ms ✓ RecursiveArrayTools 969.0 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3437.1 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 4311.6 ms ✓ StatsModels 8900.1 ms ✓ Distributions 1615.6 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1098.5 ms ✓ FastPower → FastPowerForwardDiffExt 4290.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2287.6 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 4912.7 ms ✓ Polyester 4391.4 ms ✓ NLSolversBase 1322.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStatisticsExt 1840.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1382.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 1639.3 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 3322.1 ms ✓ Distributions → DistributionsTestExt 5578.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 2257.6 ms ✓ FastBroadcast 4586.0 ms ✓ LineSearches 37140.8 ms ✓ SciMLBase 2537.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 4701.4 ms ✓ SciMLBase → SciMLBaseDistributionsExt 3559.7 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 31878.2 ms ✓ SciMLBase → SciMLBaseRCallExt 3426.7 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 6553.3 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 22066.9 ms ✓ LinearSolve 11683.5 ms ✓ SciMLJacobianOperators 9457.7 ms ✓ LinearSolve → LinearSolveForwardDiffExt 9760.5 ms ✓ LinearSolve → LinearSolveSparseArraysExt 14363.0 ms ✓ LineSearch 22835.3 ms ✓ NonlinearSolveBase 5282.8 ms ✓ LinearSolve → LinearSolveEnzymeExt 3427.4 ms ✓ LineSearch → LineSearchLineSearchesExt 3829.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 4582.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 4146.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3389.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 6649.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3366.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 10476.8 ms ✓ BracketingNonlinearSolve 20024.4 ms ✓ NonlinearSolveSpectralMethods 35598.7 ms ✓ NonlinearSolveQuasiNewton 51854.0 ms ✓ NonlinearSolveFirstOrder 3596.3 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 8669.9 ms ✓ DiffEqBase 4366.1 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 6233.4 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 3916.0 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 23283.8 ms ✓ SimpleNonlinearSolve 4835.5 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 4667.9 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4720.1 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 15373.9 ms ✓ OrdinaryDiffEqCore 4655.1 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 4370.4 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 40079.6 ms ✓ NonlinearSolve 7178.5 ms ✓ OrdinaryDiffEqExplicitRK 8454.2 ms ✓ OrdinaryDiffEqHighOrderRK 8508.8 ms ✓ OrdinaryDiffEqStabilizedRK 7592.9 ms ✓ OrdinaryDiffEqSymplecticRK 9592.2 ms ✓ OrdinaryDiffEqSSPRK 10246.4 ms ✓ OrdinaryDiffEqLowOrderRK 5837.0 ms ✓ OrdinaryDiffEqFunctionMap 9342.4 ms ✓ OrdinaryDiffEqLinear 19419.9 ms ✓ OrdinaryDiffEqTsit5 75379.2 ms ✓ OrdinaryDiffEqVerner 7327.4 ms ✓ OrdinaryDiffEqPRK 7701.9 ms ✓ OrdinaryDiffEqRKN 7687.2 ms ✓ OrdinaryDiffEqFeagin 6741.1 ms ✓ OrdinaryDiffEqQPRK 10032.9 ms ✓ OrdinaryDiffEqLowStorageRK 15691.1 ms ✓ OrdinaryDiffEqDifferentiation 7948.6 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 6327.0 ms ✓ OrdinaryDiffEqNordsieck 6649.7 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 13804.9 ms ✓ OrdinaryDiffEqExponentialRK 13850.4 ms ✓ OrdinaryDiffEqExtrapolation 49608.9 ms ✓ OrdinaryDiffEqRosenbrock 16474.4 ms ✓ OrdinaryDiffEqNonlinearSolve 14300.8 ms ✓ OrdinaryDiffEqPDIRK 13755.8 ms ✓ OrdinaryDiffEqStabilizedIRK 15765.7 ms ✓ OrdinaryDiffEqSDIRK 64251.9 ms ✓ OrdinaryDiffEqFIRK 12336.7 ms ✓ OrdinaryDiffEqIMEXMultistep 30876.8 ms ✓ OrdinaryDiffEqBDF 77407.3 ms ✓ OrdinaryDiffEqDefault 21581.2 ms ✓ OrdinaryDiffEq 51729.0 ms ✓ PartiallyObservedMarkovProcesses 258 dependencies successfully precompiled in 1830 seconds. 46 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 1956.84s ################################################################################ # Testing # Testing PartiallyObservedMarkovProcesses Status `/tmp/jl_eBmHOF/Project.toml` [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 [1dea7af3] OrdinaryDiffEq v6.106.0 [32433216] PartiallyObservedMarkovProcesses v0.5.1 [6f49c342] RCall v0.14.11 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_eBmHOF/Manifest.toml` [47edcb42] ADTypes v1.21.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.2 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [324d7699] CategoricalArrays v1.0.2 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.199.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.6 [f151be2c] EnzymeCore v0.8.18 [d4d017d3] ExponentialUtilities v1.30.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.3.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.4.0 [ae98c720] Jieko v0.2.1 [ba0b0d4f] Krylov v0.10.5 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [87fe0de2] LineSearch v0.1.6 [d3d80556] LineSearches v7.6.0 [7ed4a6bd] LinearSolve v3.57.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [d41bc354] NLSolversBase v8.0.0 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.14.0 [be0214bd] NonlinearSolveBase v2.11.1 [5959db7a] NonlinearSolveFirstOrder v1.11.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.12.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.106.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.9.0 [6ad6398a] OrdinaryDiffEqBDF v1.14.0 [bbf590c4] OrdinaryDiffEqCore v3.2.0 [50262376] OrdinaryDiffEqDefault v1.12.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.22.0 [9286f039] OrdinaryDiffEqExplicitRK v1.8.0 [e0540318] OrdinaryDiffEqExponentialRK v1.12.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.13.0 [5960d6e9] OrdinaryDiffEqFIRK v1.20.0 [101fe9f7] OrdinaryDiffEqFeagin v1.8.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.9.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.9.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.11.0 [521117fe] OrdinaryDiffEqLinear v1.10.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.10.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.11.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.19.0 [c9986a66] OrdinaryDiffEqNordsieck v1.8.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.10.0 [5b33eab2] OrdinaryDiffEqPRK v1.8.0 [04162be5] OrdinaryDiffEqQPRK v1.8.0 [af6ede74] OrdinaryDiffEqRKN v1.9.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.22.0 [2d112036] OrdinaryDiffEqSDIRK v1.11.0 [669c94d9] OrdinaryDiffEqSSPRK v1.11.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.10.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.8.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.11.0 [b1df2697] OrdinaryDiffEqTsit5 v1.9.0 [79d7bb75] OrdinaryDiffEqVerner v1.10.0 [90014a1f] PDMats v0.11.37 [69de0a69] Parsers v2.8.3 [32433216] PartiallyObservedMarkovProcesses v0.5.1 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [d236fae5] PreallocationTools v1.1.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [6f49c342] RCall v0.14.11 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.46.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.135.0 [19f34311] SciMLJacobianOperators v0.1.12 [a6db7da4] SciMLLogging v1.8.0 [c0aeaf25] SciMLOperators v1.14.1 [431bcebd] SciMLPublic v1.0.1 [53ae85a6] SciMLStructures v1.10.0 [91c51154] SentinelArrays v1.4.9 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [727e6d20] SimpleNonlinearSolve v2.10.0 [a2af1166] SortingAlgorithms v1.2.2 [0a514795] SparseMatrixColorings v0.4.23 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.8 [7792a7ef] StrideArraysCore v0.5.8 [892a3eda] StringManipulation v0.4.2 [ec057cc2] StructUtils v2.6.2 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [1b915085] WinReg v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Testing Running tests... [ Info: testing constructors and workhorses [ Info: testing error capture [ Info: testing val_array [ Info: testing helper functions [ Info: testing `melt` methods [ Info: Brownian motion tests 2.925199 seconds (24.32 M allocations: 962.888 MiB, 25.12% gc time, 18.60% compilation time) 3.364728 seconds (24.07 M allocations: 948.843 MiB, 43.84% gc time) 4.414145 seconds (24.02 M allocations: 1008.129 MiB, 54.92% gc time) 1.913565 seconds (24.02 M allocations: 1008.122 MiB) Brownian motion: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/brown.jl:12 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:70 [inlined] [7] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/brown.jl:37 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [9] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/brown.jl:14 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:10 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 [ Info: Gompertz model tests [ Info: - printing the PompObject gives "" Gompertz model: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/gompertz.jl:10 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/gompertz.jl:12 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [8] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/gompertz.jl:53 [inlined] [9] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:70 [inlined] [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:11 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 [ Info: SIR model tests [ Info: - tests with R pomp SIR model: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/sir.jl:10 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:74 [inlined] [7] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/sir.jl:16 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [9] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/sir.jl:12 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:12 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 [ Info: stochastic Rosenzweig-MacArthur model tests [ Info: - POMP.jl simulations (stoch Rosenzweig-MacArthur) 0.048199 seconds (610.98 k allocations: 28.083 MiB) 0.045185 seconds (610.98 k allocations: 28.083 MiB) 0.044899 seconds (610.98 k allocations: 28.083 MiB) stochastic Rosenzweig-MacArthur model: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/rmca.jl:10 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:70 [inlined] [7] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/rmca.jl:21 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [9] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/rmca.jl:12 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:13 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 [ Info: deterministic Rosenzweig-MacArthur model tests [ Info: - POMP.jl simulations (det Rosenzweig-MacArthur) 0.011951 seconds (49.48 k allocations: 1.939 MiB) 0.012047 seconds (49.48 k allocations: 1.939 MiB) 0.011810 seconds (49.48 k allocations: 1.939 MiB) deterministic Rosenzweig-MacArthur model: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/drmca.jl:10 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:70 [inlined] [7] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/drmca.jl:21 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [9] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/drmca.jl:12 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:14 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 [ Info: vectorfield integration tests [ Info: pfilter tests [ Info: - printing the PfilterdPompObject gives "" 1.258450 seconds (2.30 M allocations: 119.272 MiB, 97.24% compilation time) 0.025276 seconds (106.02 k allocations: 2.760 MiB) 2.370024 seconds (1.18 M allocations: 60.206 MiB, 98.76% compilation time) 0.025271 seconds (105.99 k allocations: 2.760 MiB) [ Info: speed trials [ Info: - speed tests in R speed trials: Error During Test at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/speed1.jl:11 Got exception outside of a @test REvalError: Error in library(tidyverse, warn.conflicts = FALSE) : there is no package called ‘tidyverse’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/JIY9I/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/JIY9I/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{LangSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:119 [5] reval(str::String, env::RObject{EnvSxp}) @ RCall ~/.julia/packages/RCall/JIY9I/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/JIY9I/src/macros.jl:74 [inlined] [7] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/speed1.jl:15 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [9] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/speed1.jl:13 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [11] top-level scope @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:5 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1776 [inlined] [13] macro expansion @ ~/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:17 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:283 [18] _start() @ Base ./client.jl:550 Test Summary: | Pass Error Total Time POMP.jl | 145 6 151 3m23.3s constructor and workhorses | 61 61 13.8s error messages | 16 16 17.3s val_array | 4 4 0.6s helpers | 22 22 4.9s melt methods | 11 11 6.4s Brownian motion | 1 1 2 36.7s Gompertz model | 12 1 13 14.1s SIR model | 1 1 0.0s stochastic Rosenzweig-MacArthur model | 1 1 2 3.8s deterministic Rosenzweig-MacArthur model | 1 1 2 41.8s vectorfield integration | 3 3 16.9s pfilter | 13 13 15.5s speed trials | 1 1 0.0s RNG of the outermost testset: Xoshiro(0x71b7edc00eafce94, 0x24b42e2863d4b782, 0x7fedd80dffcd4f8b, 0xb46596c01135e0e7, 0x4e40cfbfb1a9a922) ERROR: LoadError: Some tests did not pass: 145 passed, 0 failed, 6 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PartiallyObservedMarkovProcesses/Qjxdc/test/runtests.jl:4 Testing failed after 247.9s ERROR: LoadError: Package PartiallyObservedMarkovProcesses errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2535 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 2277.13s: package tests unexpectedly errored