Package evaluation to test OceanTransportMatrixBuilder on Julia 1.12.4 (422f456051*) started at 2026-01-29T01:40:58.243 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.01s ################################################################################ # Installation # Installing OceanTransportMatrixBuilder... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [c2b4a04e] + OceanTransportMatrixBuilder v0.8.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [864edb3b] + DataStructures v0.19.3 [b4f34e82] + Distances v0.10.12 [86223c79] + Graphs v1.13.4 [d25df0c9] + Inflate v0.1.5 [1914dd2f] + MacroTools v0.5.16 [c2b4a04e] + OceanTransportMatrixBuilder v0.8.2 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 1.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.12/activate_set.jl:78 Precompiling package dependencies... Precompiling packages... 2549.6 ms ✓ YAXArrayBase 63541.8 ms ✓ TiffImages 6818.7 ms ✓ OptimizationBase 27136.9 ms ✓ OceanTransportMatrixBuilder 2842.8 ms ✓ DiskArrayTools 32308.6 ms ✓ MathTeXEngine 18402.7 ms ✓ KernelDensity 56132.5 ms ✓ SciMLBase → SciMLBaseDistributionsExt 3829.7 ms ✓ WeightedOnlineStats 7839.1 ms ✓ Optim 156187.1 ms ✓ Dagger → GraphVizSimpleExt 8733.7 ms ✓ Dagger → AbstractFFTsExt 2385.6 ms ✓ YAXArrayBase → AxisArraysExt 3764.8 ms ✓ YAXArrayBase → DimensionalDataExt 71433.5 ms ✓ YAXArrayBase → ZarrExt 5551.0 ms ✓ YAXArrayBase → NetCDFExt 1205.2 ms ✓ OptimizationBase → OptimizationForwardDiffExt 779.2 ms ✓ OptimizationBase → OptimizationFiniteDiffExt 36963.8 ms ✓ Optimization 547729.1 ms ✓ Makie 152421.0 ms ✓ OptimizationOptimJL 831309.9 ms ✓ SciMLBase → SciMLBaseMakieExt 592045.3 ms ✓ DimensionalData → DimensionalDataMakieExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 jfptr_YY.634_8085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000079420fedcb50 Total snapshots: 377. Utilization: 0% ╎377 @Base/asyncevent.jl:359 (::Base.var"#634#635"{FileWatching.Pidfile.var… ╎ 377 @Base/asyncevent.jl:163 _trywait(t::Timer) ╎ 377 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Sp… ╎ 377 @Base/task.jl:1228 wait() 376╎ 377 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_67638.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] jl_finish_task at /source/src/task.c:341 start_task at /source/src/task.c:1263 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007ec458b992d0 Total snapshots: 337. Utilization: 0% ╎337 @Base/task.jl:868 task_done_hook(t::Task) ╎ 337 @Base/task.jl:1228 wait() 336╎ 337 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 _trywait at ./asyncevent.jl:163 #634 at ./asyncevent.jl:359 jfptr_YY.634_8085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1252 unknown function (ip: (nil)) at (unknown file) Allocations: 24886266 (Pool: 24885305; Big: 961); GC: 18 PkgEval terminated after 2733.18s: test duration exceeded the time limit