Package evaluation to test GeneExpressionProgramming on Julia 1.12.4 (422f456051*) started at 2026-01-29T16:42:10.889 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.07s ################################################################################ # Installation # Installing GeneExpressionProgramming... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [2f0a5bb0] + GeneExpressionProgramming v0.5.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [198e06fe] + BangBang v0.4.7 [9718e550] + Baselet v0.1.1 [6e4b80f9] + BenchmarkTools v1.6.3 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [082447d4] + ChainRules v1.72.6 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [8d63f2c5] + DispatchDoctor v0.4.27 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [a40a106e] + DynamicExpressions v1.10.1 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [587475ba] + Flux v0.16.8 ⌅ [f6369f11] + ForwardDiff v0.10.39 [d9f16b24] + Functors v0.5.2 [0c68f7d7] + GPUArrays v11.3.4 [46192b85] + GPUArraysCore v0.2.0 [92fee26a] + GZip v0.6.2 [2f0a5bb0] + GeneExpressionProgramming v0.5.2 [076d061b] + HashArrayMappedTries v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [85a1e053] + Interfaces v0.3.2 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.39 [929cbde3] + LLVM v9.4.4 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 ⌃ [d3d80556] + LineSearches v7.5.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.173 [c2834f40] + MLCore v1.0.0 ⌃ [7e8f7934] + MLDataDevices v1.13.0 [d8e11817] + MLStyle v0.4.17 [f1d291b0] + MLUtils v0.4.8 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 ⌅ [d41bc354] + NLSolversBase v7.10.0 ⌃ [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [b8a86587] + NearestNeighbors v0.4.26 [6fe1bfb0] + OffsetArrays v1.17.0 [0b1bfda6] + OneHotArrays v0.2.10 ⌅ [429524aa] + Optim v1.13.3 [3bd65402] + Optimisers v0.4.7 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [69de0a69] + Parsers v2.8.3 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v3.1.2 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [42d2dcc6] + Referenceables v0.1.3 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [fdea26ae] + SIMD v3.7.2 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.1 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [605ecd9f] + ShowCases v0.1.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [48a634ad] + Tensors v1.16.2 [8290d209] + ThreadingUtilities v0.5.5 [ac1d9e8a] + ThreadsX v0.1.12 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 [3d5dd08c] + VectorizationBase v0.21.72 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [e88e6eb3] + Zygote v0.6.77 [700de1a5] + ZygoteRules v0.2.7 [dad2f222] + LLVMExtra_jll v0.0.38+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.23s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 50508.7 ms ✓ DynamicExpressions 26721.6 ms ✓ LoopVectorization → ForwardDiffNNlibExt 58790.3 ms ✓ DynamicExpressions → DynamicExpressionsZygoteExt 8067.0 ms ✓ DynamicExpressions → DynamicExpressionsOptimExt 68709.7 ms ✓ DynamicExpressions → DynamicExpressionsLoopVectorizationExt 233688.1 ms ? GeneExpressionProgramming 5 dependencies successfully precompiled in 458 seconds. 290 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ GeneExpressionProgramming │ WARNING: Method definition cov(SparseArrays.SparseMatrixCSC{Tv, Ti} where Ti<:Integer where Tv) in module SparseArraysExt at /home/pkgeval/.julia/packages/Statistics/gbcbG/ext/SparseArraysExt.jl:14 overwritten in module SparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ LoopVectorization → ForwardDiffNNlibExt │ WARNING: method definition for relu at /home/pkgeval/.julia/packages/LoopVectorization/GKxH5/ext/ForwardDiffNNlibExt.jl:5 declares type variable S but does not use it. │ WARNING: method definition for leakyrelu at /home/pkgeval/.julia/packages/LoopVectorization/GKxH5/ext/ForwardDiffNNlibExt.jl:22 declares type variable S but does not use it. └ Precompilation completed after 470.1s ################################################################################ # Testing # Testing GeneExpressionProgramming Status `/tmp/jl_iDlWOB/Project.toml` [6e4b80f9] BenchmarkTools v1.6.3 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [a93c6f00] DataFrames v1.8.1 [31c24e10] Distributions v0.25.123 ⌅ [a40a106e] DynamicExpressions v1.10.1 [5789e2e9] FileIO v1.17.1 [587475ba] Flux v0.16.8 ⌅ [f6369f11] ForwardDiff v0.10.39 [92fee26a] GZip v0.6.2 [2f0a5bb0] GeneExpressionProgramming v0.5.2 ⌅ [682c06a0] JSON v0.21.4 [8ac3fa9e] LRUCache v1.6.2 ⌃ [d3d80556] LineSearches v7.5.1 [bdcacae8] LoopVectorization v0.12.173 [b8a86587] NearestNeighbors v0.4.26 ⌅ [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [aea7be01] PrecompileTools v1.3.3 [92933f4c] ProgressMeter v1.11.0 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [90137ffa] StaticArrays v1.9.16 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.10 [48a634ad] Tensors v1.16.2 [ac1d9e8a] ThreadsX v0.1.12 ⌅ [e88e6eb3] Zygote v0.6.77 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_iDlWOB/Manifest.toml` [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [198e06fe] BangBang v0.4.7 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.3 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [8d63f2c5] DispatchDoctor v0.4.27 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 ⌅ [a40a106e] DynamicExpressions v1.10.1 [4e289a0a] EnumX v1.0.6 [f151be2c] EnzymeCore v0.8.18 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [587475ba] Flux v0.16.8 ⌅ [f6369f11] ForwardDiff v0.10.39 [d9f16b24] Functors v0.5.2 [0c68f7d7] GPUArrays v11.3.4 [46192b85] GPUArraysCore v0.2.0 [92fee26a] GZip v0.6.2 [2f0a5bb0] GeneExpressionProgramming v0.5.2 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [85a1e053] Interfaces v0.3.2 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] 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[1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [48a634ad] Tensors v1.16.2 [8290d209] ThreadingUtilities v0.5.5 [ac1d9e8a] ThreadsX v0.1.12 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.85 [3a884ed6] UnPack v1.0.2 [013be700] UnsafeAtomics v0.3.0 [3d5dd08c] VectorizationBase v0.21.72 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 ⌅ [e88e6eb3] Zygote v0.6.77 [700de1a5] ZygoteRules v0.2.7 [dad2f222] LLVMExtra_jll v0.0.38+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 8303.1 ms ✓ DynamicExpressions → DynamicExpressionsOptimExt 1 dependency successfully precompiled in 10 seconds. 77 already precompiled. Precompiling packages... 15627.3 ms ✓ ChainRules 2824.0 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 18116.3 ms ✓ GPUArrays 73807.2 ms ✓ Zygote 4 dependencies successfully precompiled in 115 seconds. 102 already precompiled. Precompiling packages... 2165.8 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 3 seconds. 40 already precompiled. Precompiling packages... 11203.2 ms ✓ DynamicExpressions → DynamicExpressionsZygoteExt 1 dependency successfully precompiled in 13 seconds. 110 already precompiled. 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Precompiling packages... 2512.1 ms ✓ Accessors → StructArraysExt 1328.1 ms ✓ BangBang → BangBangStructArraysExt 1645.1 ms ✓ MLDataDevices 10518.9 ms ✓ Transducers 15087.7 ms ✓ NNlib 1683.5 ms ✓ MLDataDevices → MLDataDevicesChainRulesCoreExt 9494.5 ms ✓ MLDataDevices → MLDataDevicesGPUArraysExt 1192.6 ms ✓ MLDataDevices → MLDataDevicesFillArraysExt 6219.8 ms ✓ MLDataDevices → MLDataDevicesZygoteExt 1442.2 ms ✓ MLDataDevices → MLDataDevicesSparseArraysExt 2329.6 ms ✓ MLDataDevices → MLDataDevicesChainRulesExt 2545.4 ms ✓ Transducers → TransducersAdaptExt 15689.4 ms ✓ FLoops 3370.3 ms ✓ NNlib → NNlibEnzymeCoreExt 3163.4 ms ✓ NNlib → NNlibSpecialFunctionsExt 3622.3 ms ✓ NNlib → NNlibForwardDiffExt 3680.7 ms ✓ OneHotArrays 27651.0 ms ✓ MLUtils 3153.1 ms ✓ MLDataDevices → MLDataDevicesOneHotArraysExt 6799.1 ms ✓ MLDataDevices → MLDataDevicesMLUtilsExt 40817.4 ms ✓ Flux 21 dependencies successfully precompiled in 167 seconds. 162 already precompiled. 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WARNING: method definition for leakyrelu at /home/pkgeval/.julia/packages/LoopVectorization/GKxH5/ext/ForwardDiffNNlibExt.jl:22 declares type variable S but does not use it. 5635.3 ms ✓ LoopVectorization → ForwardDiffNNlibExt 1 dependency successfully precompiled in 7 seconds. 80 already precompiled. 1 dependency had output during precompilation: ┌ LoopVectorization → ForwardDiffNNlibExt │ [Output was shown above] └ Precompiling packages... 10306.6 ms ✓ Distributions 1 dependency successfully precompiled in 15 seconds. 40 already precompiled. Precompiling packages... 1340.3 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 1 dependency successfully precompiled in 2 seconds. 21 already precompiled. Precompiling packages... 6238.5 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 9 seconds. 48 already precompiled. 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Test Summary: | Pass Total Time SymbolicEntities Tests | 15 15 28.5s ("Lib Entries:", total_len_lib) = ("Lib Entries:", 7420) "Genes before test" = "Genes before test" gene = Int8[1, 4, 1, 2, 7, 8, 7, 3, 4, 7, 7, 8, 1, 4, 8, 7, 8] "Genes after test" = "Genes after test" gene = Int8[1, 6, 5, 6, 5, 2, 8, 8, 2, 7, 2, 8, 5, 8, 8, 7, 8] "Correction" = "Correction" correction = 0.0f0 dim4 = Float16[1.0, 1.0, 0.0, 0.0, 0.0, 0.0, 0.0] Test Summary: | Pass Total Time SBP Tests | 18 18 18.5s Test Summary: | Pass Total Time dominates_ function | 13 13 0.5s Test Summary: | Pass Total Time calculate_fronts function | 11 11 2.2s [ Info: Dict(5 => Inf, 4 => 1.0, 2 => 1.0, 3 => 1.0, 1 => Inf) Test Summary: | Pass Total Time assign_crowding_distance function | 8 8 6.2s Test Summary: | Pass Total Time nsga_selection function | 8 8 7.2s Training: 2%|▌ | ETA: 1:00:01 (36.75 s/it) epoch_: 2 duplicates_per_epoch: 29 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 11%|███ | ETA: 0:10:01 ( 6.75 s/it) epoch_: 11 duplicates_per_epoch: 52 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 14%|███▊ | ETA: 0:07:37 ( 5.32 s/it) epoch_: 14 duplicates_per_epoch: 43 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 16%|████▍ | ETA: 0:06:31 ( 4.66 s/it) epoch_: 16 duplicates_per_epoch: 47 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 18%|████▉ | ETA: 0:05:40 ( 4.15 s/it) epoch_: 18 duplicates_per_epoch: 47 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 20%|█████▍ | ETA: 0:04:59 ( 3.74 s/it) epoch_: 20 duplicates_per_epoch: 55 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 22%|██████ | ETA: 0:04:26 ( 3.41 s/it) epoch_: 22 duplicates_per_epoch: 41 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 24%|██████▌ | ETA: 0:03:58 ( 3.13 s/it) epoch_: 24 duplicates_per_epoch: 42 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 26%|███████ | ETA: 0:03:34 ( 2.89 s/it) epoch_: 26 duplicates_per_epoch: 47 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 28%|███████▌ | ETA: 0:03:14 ( 2.69 s/it) epoch_: 28 duplicates_per_epoch: 37 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 30%|████████▏ | ETA: 0:02:56 ( 2.51 s/it) epoch_: 30 duplicates_per_epoch: 28 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 32%|████████▋ | ETA: 0:02:40 ( 2.36 s/it) epoch_: 32 duplicates_per_epoch: 45 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 34%|█████████▏ | ETA: 0:02:27 ( 2.22 s/it) epoch_: 34 duplicates_per_epoch: 53 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 36%|█████████▊ | ETA: 0:02:15 ( 2.10 s/it) epoch_: 36 duplicates_per_epoch: 62 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 38%|██████████▎ | ETA: 0:02:04 ( 2.00 s/it) epoch_: 38 duplicates_per_epoch: 61 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 40%|██████████▊ | ETA: 0:01:54 ( 1.90 s/it) epoch_: 40 duplicates_per_epoch: 44 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 42%|███████████▍ | ETA: 0:01:45 ( 1.81 s/it) epoch_: 42 duplicates_per_epoch: 54 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 44%|███████████▉ | ETA: 0:01:37 ( 1.73 s/it) epoch_: 44 duplicates_per_epoch: 25 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 46%|████████████▍ | ETA: 0:01:30 ( 1.66 s/it) epoch_: 46 duplicates_per_epoch: 17 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 48%|█████████████ | ETA: 0:01:23 ( 1.59 s/it) epoch_: 48 duplicates_per_epoch: 26 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 50%|█████████████▌ | ETA: 0:01:17 ( 1.53 s/it) epoch_: 50 duplicates_per_epoch: 23 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 52%|██████████████ | ETA: 0:01:11 ( 1.47 s/it) epoch_: 52 duplicates_per_epoch: 31 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 55%|██████████████▉ | ETA: 0:01:03 ( 1.40 s/it) epoch_: 55 duplicates_per_epoch: 46 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 58%|███████████████▋ | ETA: 0:00:56 ( 1.33 s/it) epoch_: 58 duplicates_per_epoch: 31 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 60%|████████████████▎ | ETA: 0:00:51 ( 1.29 s/it) epoch_: 60 duplicates_per_epoch: 40 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 62%|████████████████▊ | ETA: 0:00:47 ( 1.25 s/it) epoch_: 62 duplicates_per_epoch: 66 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 65%|█████████████████▌ | ETA: 0:00:42 ( 1.19 s/it) epoch_: 65 duplicates_per_epoch: 52 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 68%|██████████████████▍ | ETA: 0:00:36 ( 1.14 s/it) epoch_: 68 duplicates_per_epoch: 78 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 70%|██████████████████▉ | ETA: 0:00:33 ( 1.11 s/it) epoch_: 70 duplicates_per_epoch: 82 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 73%|███████████████████▊ | ETA: 0:00:29 ( 1.07 s/it) epoch_: 73 duplicates_per_epoch: 76 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 76%|████████████████████▌ | ETA: 0:00:25 ( 1.03 s/it) epoch_: 76 duplicates_per_epoch: 72 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 79%|█████████████████████▍ | ETA: 0:00:21 ( 0.99 s/it) epoch_: 79 duplicates_per_epoch: 73 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 81%|█████████████████████▉ | ETA: 0:00:18 ( 0.97 s/it) epoch_: 81 duplicates_per_epoch: 63 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 84%|██████████████████████▋ | ETA: 0:00:15 ( 0.93 s/it) epoch_: 84 duplicates_per_epoch: 75 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 87%|███████████████████████▌ | ETA: 0:00:12 ( 0.90 s/it) epoch_: 87 duplicates_per_epoch: 77 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 90%|████████████████████████▎ | ETA: 0:00:09 ( 0.87 s/it) epoch_: 90 duplicates_per_epoch: 99 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 92%|████████████████████████▉ | ETA: 0:00:07 ( 0.86 s/it) epoch_: 92 duplicates_per_epoch: 75 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 94%|█████████████████████████▍ | ETA: 0:00:05 ( 0.84 s/it) epoch_: 94 duplicates_per_epoch: 71 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 97%|██████████████████████████▎| ETA: 0:00:02 ( 0.82 s/it) epoch_: 97 duplicates_per_epoch: 79 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 99%|██████████████████████████▊| ETA: 0:00:01 ( 0.80 s/it) epoch_: 99 duplicates_per_epoch: 90 train_loss: 0.000000e+00 validation_loss: 0.000000e+00         Training: 100%|███████████████████████████| Time: 0:01:39 ( 1.00 s/it) epoch_: 100 duplicates_per_epoch: 70 train_loss: 0.000000e+00 validation_loss: 0.000000e+00 Test Summary: | Pass Total Time GepRegressor Tests | 24 24 2m09.2s Precompiling packages... 3162.8 ms ✓ BenchmarkTools 1 dependency successfully precompiled in 3 seconds. 16 already precompiled. Test Summary: | Pass Total Time TensorRegUtils | 7 7 6.2s Test Summary: | Pass Total Time All Node Operations | 9 9 1.7s Testing GeneExpressionProgramming tests passed Testing completed after 749.6s PkgEval succeeded after 1262.34s