Package evaluation to test DiffusionGarnet on Julia 1.12.4 (01a2eadb04*) started at 2026-01-29T18:13:43.813 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.38s ################################################################################ # Installation # Installing DiffusionGarnet... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [d440471f] + DiffusionGarnet v1.2.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [13072b0f] + AxisAlgorithms v1.1.0 [ab4f0b2a] + BFloat16s v0.6.1 [7b0aa2c9] + BibTeX v0.1.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [052768ef] + CUDA v5.9.6 [1af6417a] + CUDA_Runtime_Discovery v1.0.0 [d35fcfd7] + CellArrays v0.3.2 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.199.0 [459566f4] + DiffEqCallbacks v4.12.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.15 [d440471f] + DiffusionGarnet v1.2.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.6 [f151be2c] + EnzymeCore v0.8.18 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.3.1 [1a297f60] + FillArrays v1.16.0 [f6369f11] + ForwardDiff v1.3.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [0c68f7d7] + GPUArrays v11.3.4 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.8.2 [096a3bc2] + GPUToolbox v1.0.0 [e018b62d] + GeoParams v0.7.9 [f67ccb44] + HDF5 v0.17.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [7d512f48] + InternedStrings v0.7.0 [a98d9a8b] + Interpolations v0.16.2 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [63c18a36] + KernelAbstractions v0.9.39 [49dc5b4e] + KernelDensitySJ v0.2.2 [929cbde3] + LLVM v9.4.4 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [4345ca2d] + Loess v0.6.5 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 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[a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 18.47s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 185138.5 ms ✓ ParallelStencil → ParallelStencil_CUDAExt 142321.7 ms ? DiffusionGarnet 1 dependency successfully precompiled in 340 seconds. 310 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 1 dependency had output during precompilation: ┌ DiffusionGarnet │ ┌ Warning: `Myrs` as a unit is deprecated. Use `Myr` instead. │ └ @ GeoParams.Units ~/.julia/packages/GeoParams/FuV4T/src/Units.jl:21 │ WARNING: Method definition unwrap_type(Type{var"#s1"} where var"#s1"<:(OffsetArrays.OffsetArray{T, N, AA} where AA<:AbstractArray{T, N} where N where T)) in module OffsetArraysAdaptExt at /home/pkgeval/.julia/packages/OffsetArrays/b7qpm/ext/OffsetArraysAdaptExt.jl:14 overwritten in module OffsetArraysAdaptExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 378.03s ################################################################################ # Testing # Testing DiffusionGarnet Status `/tmp/jl_Ap4Hys/Project.toml` [8bb1440f] DelimitedFiles v1.9.1 [d440471f] DiffusionGarnet v1.2.0 [e018b62d] GeoParams v0.7.9 [f67ccb44] HDF5 v0.17.2 [033835bb] JLD2 v0.6.3 [37e2e46d] LinearAlgebra v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Ap4Hys/Manifest.toml` [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [ab4f0b2a] BFloat16s v0.6.1 [7b0aa2c9] BibTeX v0.1.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.2 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [052768ef] CUDA v5.9.6 [1af6417a] CUDA_Runtime_Discovery v1.0.0 [d35fcfd7] CellArrays v0.3.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.199.0 [459566f4] DiffEqCallbacks v4.12.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.15 [d440471f] DiffusionGarnet v1.2.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.6 [f151be2c] EnzymeCore v0.8.18 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.3.1 [5789e2e9] FileIO v1.17.1 [1a297f60] FillArrays v1.16.0 [f6369f11] ForwardDiff v1.3.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [0c68f7d7] GPUArrays v11.3.4 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.8.2 [096a3bc2] GPUToolbox v1.0.0 [e018b62d] GeoParams v0.7.9 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [7d512f48] InternedStrings v0.7.0 [a98d9a8b] Interpolations v0.16.2 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.3 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [63c18a36] KernelAbstractions v0.9.39 [49dc5b4e] 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StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [7792a7ef] StrideArraysCore v0.5.8 [892a3eda] StringManipulation v0.4.2 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [e689c965] Tracy v0.1.6 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [967fb449] Unidecode v1.2.0 [1986cc42] Unitful v1.27.0 [013be700] UnsafeAtomics v0.3.0 [efce3f68] WoodburyMatrices v1.1.0 [d1e2174e] CUDA_Compiler_jll v0.4.1+1 [4ee394cb] CUDA_Driver_jll v13.1.0+2 ⌅ [76a88914] CUDA_Runtime_jll v0.19.2+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.38+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.2.2+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [1e29f10c] demumble_jll v1.3.0+0 [477f73a3] libaec_jll v1.1.5+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 79671.3 ms ✓ DiffusionGarnet 1 dependency successfully precompiled in 89 seconds. 303 already precompiled. Precompiling packages... 55513.2 ms ✓ JLD2 1 dependency successfully precompiled in 56 seconds. 40 already precompiled. Precompiling packages... 5810.6 ms ✓ JLD2 → UnPackExt 1 dependency successfully precompiled in 6 seconds. 42 already precompiled. ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.0 └ Myr. 27.357259 seconds (12.99 M allocations: 665.209 MiB, 0.95% gc time, 99.41% compilation time: 2% of which was recompilation) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.0 └ Myr. 16.045251 seconds (5.36 M allocations: 270.431 MiB, 0.36% gc time, 99.20% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.0 └ Myr. 29.841446 seconds (9.80 M allocations: 498.987 MiB, 0.90% gc time, 92.78% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.0 └ Myr. 341.433757 seconds (10.85 M allocations: 1.136 GiB, 0.32% gc time, 13.20% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.01 └ Myr. 13.748380 seconds (5.18 M allocations: 268.267 MiB, 0.51% gc time, 99.48% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.01 └ Myr. 12.357798 seconds (3.61 M allocations: 187.810 MiB, 0.75% gc time, 99.16% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.01 └ Myr. 20.146434 seconds (3.87 M allocations: 206.217 MiB, 0.79% gc time, 61.80% compilation time) ┌ Info: New temperature and pressure: 600.0 °C and 0.3 GPa, updated at 0.01 └ Myr. 15.392799 seconds (3.88 M allocations: 409.593 MiB, 6.62% gc time, 77.29% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 25.294623 seconds (8.59 M allocations: 461.677 MiB, 2.79% gc time, 99.53% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 15.264935 seconds (4.45 M allocations: 233.680 MiB, 0.85% gc time, 99.13% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 28.434773 seconds (8.87 M allocations: 460.592 MiB, 0.69% gc time, 93.51% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 259.757474 seconds (7.34 M allocations: 1.283 GiB, 0.43% gc time, 6.08% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 12.704029 seconds (3.94 M allocations: 215.612 MiB, 0.95% gc time, 85.09% compilation time: <1% of which was recompilation) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 253.792966 seconds (3.38 M allocations: 1.223 GiB, 0.38% gc time, 3.57% compilation time: <1% of which was recompilation) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. [ Info: Data saved at 0.1 Myr. 11.687196 seconds (3.44 M allocations: 178.304 MiB, 99.23% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. [ Info: Data saved at 0.1 Myr. 11.561354 seconds (3.38 M allocations: 175.686 MiB, 0.99% gc time, 98.92% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 40.305233 seconds (4.03 M allocations: 227.802 MiB, 29.62% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 19.349821 seconds (3.62 M allocations: 468.421 MiB, 1.37% gc time, 57.25% compilation time) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 33.153915 seconds (2.49 M allocations: 149.761 MiB, 16.53% compilation time: <1% of which was recompilation) [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.0 Myr. [ Info: Data saved at 0.01 Myr. 16.676599 seconds (2.02 M allocations: 459.614 MiB, 12.07% gc time, 36.24% compilation time: <1% of which was recompilation) 19.460932 seconds (3.27 M allocations: 169.606 MiB, 0.35% gc time, 58.37% compilation time) 13.837767 seconds (3.26 M allocations: 169.915 MiB, 78.70% compilation time) 57.486413 seconds (4.29 M allocations: 248.987 MiB, 0.39% gc time, 18.36% compilation time) 365.338868 seconds (7.35 M allocations: 985.228 MiB, 0.46% gc time, 10.40% compilation time) 10.738499 seconds (3.00 M allocations: 155.451 MiB, 98.81% compilation time) 10.594304 seconds (3.01 M allocations: 156.088 MiB, 1.14% gc time, 97.95% compilation time) 179.081248 seconds (5.69 M allocations: 347.318 MiB, 0.15% gc time, 5.60% compilation time) ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 475 running 1 of 1 signal (10): User defined signal 1 getindex at ./essentials.jl:920 [inlined] getindex at ./array.jl:929 [inlined] macro expansion at /home/pkgeval/.julia/packages/DiffusionGarnet/7JxJu/src/discretisation/3D/semi_discretisation_3D_trace.jl:52 [inlined] macro expansion at /home/pkgeval/.julia/packages/ParallelStencil/IMBmF/src/ParallelKernel/parallel.jl:650 [inlined] #stencil_diffusion_3D_major!##13 at ./threadingconstructs.jl:276 #stencil_diffusion_3D_major!##11 at ./threadingconstructs.jl:243 [inlined] #threading_run##0 at ./threadingconstructs.jl:177 unknown function (ip: 0x7d621f6a782b) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:693 wait at ./process.jl:686 jfptr_wait_51623.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2553 unknown function (ip: 0x71dd66f87103) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #205 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2493 withenv at ./env.jl:265 #190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2161 #186 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2275 #mktempdir#21 at ./file.jl:936 unknown function (ip: 0x71dd66f7f38c) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 mktempdir at ./file.jl:932 mktempdir at ./file.jl:932 #sandbox#182 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2222 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 unknown function (ip: 0x71dd66f72a81) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#193 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2478 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2384 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:538 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:515 unknown function (ip: 0x71dd66f726b1) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 unknown function (ip: 0x71dd66f70100) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:158 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 unknown function (ip: 0x71dd66f67bbf) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2870 _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 _include at ./loading.jl:2930 include at ./Base.jl:306 exec_options at ./client.jl:317 _start at ./client.jl:550 jfptr__start_66284.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x71dd8339e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000071dd68ffc010 Total snapshots: 407. Utilization: 0% ╎407 @Base/client.jl:550 _start() ╎ 407 @Base/client.jl:317 exec_options(opts::Base.JLOptions) ╎ 407 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 407 @Base/loading.jl:2930 _include(mapexpr::Function, mod::Module, _pat… ╎ 407 @Base/loading.jl:2870 include_string(mapexpr::typeof(identity), mo… ╎ 407 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 407 @Pkg/src/API.jl:156 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 407 @Pkg/src/API.jl:156 #test#81 ╎ ╎ 407 @Pkg/src/API.jl:157 test ╎ ╎ 407 @Pkg/src/API.jl:157 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 407 @Pkg/src/API.jl:158 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 407 @Pkg/src/API.jl:169 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 407 @Pkg/src/API.jl:515 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 407 @Pkg/src/API.jl:538 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 407 @Pkg/…erations.jl:2384 test ╎ ╎ ╎ 407 @Pkg/…erations.jl:2478 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 407 @Pkg/…rations.jl:2212 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 407 @Pkg/…rations.jl:2222 #sandbox#182 ╎ ╎ ╎ ╎ 407 @Base/file.jl:932 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 407 @Base/file.jl:932 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 407 @Base/file.jl:936 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 407 @Pkg/…tions.jl:2275 (::Pkg.Operations.var"#186#18… ╎ ╎ ╎ ╎ ╎ 407 @Pkg/…tions.jl:2161 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 407 @Pkg/…tions.jl:2308 (::Pkg.Operations.var"#190#… ╎ ╎ ╎ ╎ ╎ 407 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 407 @Pkg/…ions.jl:2493 (::Pkg.Operations.var"#205… ╎ ╎ ╎ ╎ ╎ ╎ 407 @Pkg/…ons.jl:2553 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…ss.jl:686 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…ss.jl:693 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…sk.jl:1228 wait() 406╎ ╎ ╎ ╎ ╎ ╎ ╎ 407 @Base/…sk.jl:1216 poptask(W::Base.Intr… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_7998.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 23996413 (Pool: 23995725; Big: 688); GC: 23 [475] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/DiffusionGarnet/7JxJu/test/test_discretisation_trace.jl:61 unknown function (ip: 0x7d624a96b3c4) at /lib/x86_64-linux-gnu/libc.so.6 _new_genericmemory_ at /source/src/genericmemory.c:71 [inlined] jl_alloc_genericmemory at /source/src/genericmemory.c:101 ijl_array_grow_end at /source/src/array.c:222 _append_symbol_to_bindings_array at /source/src/module.c:1958 [inlined] append_module_names at /source/src/module.c:1980 ijl_module_names at /source/src/module.c:2001 #unsorted_names#4 at ./runtime_internals.jl:119 [inlined] unsorted_names at ./runtime_internals.jl:119 [inlined] make_typealias at ./show.jl:627 show_typealias at ./show.jl:808 _show_type at ./show.jl:973 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_at_namedtuple at ./show.jl:1232 unknown function (ip: 0x7d6214d662ed) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_datatype at ./show.jl:1205 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_datatype at ./show.jl:1190 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_datatype at ./show.jl:1190 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 jfptr_show_11798.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 show_typeparams at ./show.jl:725 show_datatype at ./show.jl:1219 show_datatype at ./show.jl:1127 [inlined] _show_type at ./show.jl:976 show at ./show.jl:968 #sprint#437 at ./strings/io.jl:115 sprint at ./strings/io.jl:110 [inlined] #print_type_bicolor#501 at ./show.jl:2751 [inlined] print_type_bicolor at ./show.jl:2750 jfptr_print_type_bicolor_17965.1 at /opt/julia/share/julia/compiled/v1.12/REPL/u0gqU_9HAIE.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 #show_tuple_as_call#495 at ./show.jl:2618 show_tuple_as_call at ./show.jl:2585 [inlined] show_spec_sig at ./stacktraces.jl:312 show_spec_linfo at ./stacktraces.jl:278 #sprint#437 at ./strings/io.jl:117 sprint at ./strings/io.jl:110 [inlined] tree_format at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1042 print_tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1254 tree at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1308 print_group at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:389 #print#5 at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:331 print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 [inlined] print at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:271 _peek_report at /source/usr/share/julia/stdlib/v1.12/Profile/src/Profile.jl:94 unknown function (ip: 0x7d6214d1d64f) at (unknown file) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] jl_f_invokelatest at /source/src/builtins.c:881 profile_printing_listener at ./Base.jl:334 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_7998.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4010 [inlined] ijl_apply_generic at /source/src/gf.c:4210 jl_apply at /source/src/julia.h:2391 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 235844500 (Pool: 235842149; Big: 2351); GC: 172 PkgEval terminated after 2734.5s: test duration exceeded the time limit